RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C YIG1Q08956 461 aa6.3□□□□□ -1.4
NUP42YDR192C XKS1P42826 600 aa6.29□□□□□ -1.4
NUP42YDR192C YGL140CP53120 1219 aa6.29□□□□□ -1.4
NUP42YDR192C FPR4Q06205 392 aaPredicted RBP6.29□□□□□ -1.4
NUP42YDR192C YLL054CQ12244 843 aa6.29□□□□□ -1.4
NUP42YDR192C NUP159P40477 1460 aa6.28□□□□□ -1.4
NUP42YDR192C MRP10O75012 95 aa6.28□□□□□ -1.4
NUP42YDR192C ATG14P38270 344 aa6.28□□□□□ -1.4
NUP42YDR192C MTR4P47047 1073 aaKnown RBP6.28□□□□□ -1.4
NUP42YDR192C GCV1P48015 400 aa6.28□□□□□ -1.4
NUP42YDR192C UTP22P53254 1237 aaPredicted RBP6.28□□□□□ -1.4
NUP42YDR192C GDE1Q02979 1223 aa6.28□□□□□ -1.4
NUP42YDR192C HAS1Q03532 505 aaKnown RBP6.28□□□□□ -1.4
NUP42YDR192C SSF2Q12153 453 aaPredicted RBP6.28□□□□□ -1.4
NUP42YDR192C GCR1P07261 785 aa6.27□□□□□ -1.41
NUP42YDR192C SAC7P17121 654 aa6.27□□□□□ -1.41
NUP42YDR192C EXO5P38289 585 aa6.27□□□□□ -1.41
NUP42YDR192C YGR053CP53234 283 aa6.27□□□□□ -1.41
NUP42YDR192C SOK2P53438 785 aaPredicted RBP6.27□□□□□ -1.41
NUP42YDR192C SIW14P53965 281 aa6.27□□□□□ -1.41
NUP42YDR192C GIS4Q04233 774 aa6.27□□□□□ -1.41
NUP42YDR192C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41 RIP-Chip
NUP42YDR192C GIP2P40036 548 aa6.26□□□□□ -1.41
NUP42YDR192C FAR11P53917 953 aa6.26□□□□□ -1.41
NUP42YDR192C YDL176WQ12027 708 aa6.26□□□□□ -1.41
NUP42YDR192C YOL098CQ12496 1037 aa6.26□□□□□ -1.41
NUP42YDR192C DOP1Q03921 1698 aa6.26□□□□□ -1.41
NUP42YDR192C NTE1Q04958 1679 aa6.26□□□□□ -1.41
NUP42YDR192C SPP41P38904 1435 aa6.25□□□□□ -1.41
NUP42YDR192C NAR1P23503 491 aaKnown RBP6.25□□□□□ -1.41
NUP42YDR192C DUT1P33317 147 aa6.25□□□□□ -1.41
NUP42YDR192C RDH54P38086 958 aa6.25□□□□□ -1.41
NUP42YDR192C ALG14P38242 237 aa6.25□□□□□ -1.41
NUP42YDR192C HDA2Q06629 674 aa6.25□□□□□ -1.41
NUP42YDR192C NHA1Q99271 985 aa6.25□□□□□ -1.41
NUP42YDR192C PAN5P38787 379 aa6.24□□□□□ -1.41
NUP42YDR192C SNF7P39929 240 aaKnown RBP6.24□□□□□ -1.41
NUP42YDR192C FAA4P47912 694 aaKnown RBP6.24□□□□□ -1.41
NUP42YDR192C GNP1P48813 663 aa6.24□□□□□ -1.41
NUP42YDR192C YGR035CP53222 116 aa6.24□□□□□ -1.41
NUP42YDR192C MEC3Q02574 474 aa6.24□□□□□ -1.41
NUP42YDR192C RKM2Q03942 479 aa6.24□□□□□ -1.41
NUP42YDR192C TY1B-JR2P47100 1755 aaKnown RBP6.23□□□□□ -1.41
NUP42YDR192C TY1B-ER2Q03619 1755 aa6.23□□□□□ -1.41
NUP42YDR192C TY1B-MR1Q04214 1755 aa6.23□□□□□ -1.41
NUP42YDR192C TY1B-MR2Q04670 1755 aaKnown RBP6.23□□□□□ -1.41
NUP42YDR192C TY1B-LR1Q12088 1755 aaKnown RBP6.23□□□□□ -1.41
NUP42YDR192C TY1B-NL1Q12112 1755 aa6.23□□□□□ -1.41
NUP42YDR192C TY1B-GR1Q12141 1755 aa6.23□□□□□ -1.41
NUP42YDR192C TY1B-BLQ12490 1755 aa6.23□□□□□ -1.41
NUP42YDR192C PGM2P37012 569 aaKnown RBP6.23□□□□□ -1.41
NUP42YDR192C DSE4P53753 1117 aa6.23□□□□□ -1.41
NUP42YDR192C SPO20Q04359 397 aa6.23□□□□□ -1.41
NUP42YDR192C HPF1Q05164 967 aa6.23□□□□□ -1.41
NUP42YDR192C NUP170P38181 1502 aa6.22□□□□□ -1.41
NUP42YDR192C TY1A-LR4P0C2I8 440 aaKnown RBP6.22□□□□□ -1.41
NUP42YDR192C TY1A-DR6P0CX70 440 aa6.22□□□□□ -1.41
NUP42YDR192C TY1A-ER1P0CX71 440 aa6.22□□□□□ -1.41
NUP42YDR192C TY1A-LR2P0CX72 440 aa6.22□□□□□ -1.41
NUP42YDR192C TY1A-PLP0CX73 440 aa6.22□□□□□ -1.41
NUP42YDR192C TY1A-JR1P0CX74 440 aa6.22□□□□□ -1.41
NUP42YDR192C TY1A-LR3P0CX75 440 aa6.22□□□□□ -1.41
NUP42YDR192C TY1A-ML2P0CX76 440 aa6.22□□□□□ -1.41
NUP42YDR192C ADD66P36040 267 aa6.22□□□□□ -1.41
NUP42YDR192C EST2Q06163 884 aa6.22□□□□□ -1.41
NUP42YDR192C TY1A-GR1Q12085 440 aa6.22□□□□□ -1.41
NUP42YDR192C FAL1Q12099 399 aaKnown RBP6.22□□□□□ -1.41
NUP42YDR192C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.22□□□□□ -1.41
NUP42YDR192C TY1A-OLQ92392 440 aaKnown RBP6.22□□□□□ -1.41
NUP42YDR192C LYP1P32487 611 aa6.21□□□□□ -1.42
NUP42YDR192C MAE1P36013 669 aaKnown RBP6.21□□□□□ -1.42
NUP42YDR192C POL5P39985 1022 aaKnown RBP6.21□□□□□ -1.42
NUP42YDR192C TED1P40533 473 aa6.21□□□□□ -1.42
NUP42YDR192C UTP5Q04177 643 aaKnown RBP6.21□□□□□ -1.42
NUP42YDR192C OPI10Q08202 246 aa6.21□□□□□ -1.42
NUP42YDR192C ELG1Q12050 791 aa6.21□□□□□ -1.42
NUP42YDR192C TSC11P40061 1430 aa6.21□□□□□ -1.42
NUP42YDR192C IKI3Q06706 1349 aaKnown RBP6.21□□□□□ -1.42
NUP42YDR192C RPO21P04050 1733 aaKnown RBP6.2□□□□□ -1.42
NUP42YDR192C TY4B-PA0A0B7P3V8 1104 aa6.2□□□□□ -1.42
NUP42YDR192C STI1P15705 589 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
NUP42YDR192C SCT1P32784 759 aa6.2□□□□□ -1.42
NUP42YDR192C REI1P38344 393 aaPredicted RBP6.2□□□□□ -1.42
NUP42YDR192C HSE1P38753 452 aa6.2□□□□□ -1.42
NUP42YDR192C NEM1P38757 446 aa6.2□□□□□ -1.42
NUP42YDR192C OSW7P43611 510 aa6.2□□□□□ -1.42
NUP42YDR192C TYW3P53177 273 aa6.2□□□□□ -1.42
NUP42YDR192C YMR074CQ04773 145 aa6.2□□□□□ -1.42
NUP42YDR192C TDA5Q06417 326 aaKnown RBP6.2□□□□□ -1.42
NUP42YDR192C LAP2Q10740 671 aa6.2□□□□□ -1.42
NUP42YDR192C TY4A-HQ6Q5P6 413 aa6.2□□□□□ -1.42
NUP42YDR192C TRP2P00899 507 aaKnown RBP6.19□□□□□ -1.42
NUP42YDR192C SRP40P32583 406 aaPredicted RBP6.19□□□□□ -1.42
NUP42YDR192C HXT13P39924 564 aa6.19□□□□□ -1.42
NUP42YDR192C HXT17P53631 564 aa6.19□□□□□ -1.42
NUP42YDR192C HXT15P54854 567 aa6.19□□□□□ -1.42
NUP42YDR192C EEB1Q02891 456 aa6.19□□□□□ -1.42
NUP42YDR192C NAN1Q02931 896 aaKnown RBP6.19□□□□□ -1.42
NUP42YDR192C SNQ2P32568 1501 aaKnown RBP6.19□□□□□ -1.42
NUP42YDR192C AI1P03875 834 aa6.18□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms