RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C PMR1P13586 950 aa6.05□□□□□ -1.44
RFA1YAR007C SDH2P21801 266 aa6.05□□□□□ -1.44
RFA1YAR007C SAC6P32599 642 aaKnown RBP6.05□□□□□ -1.44
RFA1YAR007C VPS8P39702 1274 aa6.05□□□□□ -1.44
RFA1YAR007C ATG3P40344 310 aa6.05□□□□□ -1.44
RFA1YAR007C SEC26P41810 973 aaKnown RBP6.05□□□□□ -1.44
RFA1YAR007C TRS85P46944 698 aa6.05□□□□□ -1.44
RFA1YAR007C VTC3Q02725 835 aa6.05□□□□□ -1.44
RFA1YAR007C CSC1Q06538 782 aa6.05□□□□□ -1.44
RFA1YAR007C BUD20Q08004 166 aaPredicted RBP6.05□□□□□ -1.44
RFA1YAR007C ISW1P38144 1129 aa6.05□□□□□ -1.44
RFA1YAR007C YSW1P38280 609 aa6.05□□□□□ -1.44
RFA1YAR007C MCX1P38323 520 aaPredicted RBP6.05□□□□□ -1.44
RFA1YAR007C ALD2P47771 506 aa6.05□□□□□ -1.44
RFA1YAR007C TUM1Q08686 304 aaKnown RBP6.05□□□□□ -1.44
RFA1YAR007C RPS6AP0CX37 236 aaKnown RBP6.04□□□□□ -1.44
RFA1YAR007C RPS6BP0CX38 236 aaPredicted RBP6.04□□□□□ -1.44
RFA1YAR007C DIT2P21595 489 aa6.04□□□□□ -1.44
RFA1YAR007C PAP1P29468 568 aaKnown RBP6.04□□□□□ -1.44
RFA1YAR007C DPH5P32469 300 aaPredicted RBP6.04□□□□□ -1.44
RFA1YAR007C YME2P32843 850 aa6.04□□□□□ -1.44
RFA1YAR007C NFU1P32860 256 aa6.04□□□□□ -1.44
RFA1YAR007C EFM4P40516 257 aa6.04□□□□□ -1.44
RFA1YAR007C YJR008WP47085 338 aa6.04□□□□□ -1.44
RFA1YAR007C ERG5P54781 538 aa6.04□□□□□ -1.44
RFA1YAR007C ITT1Q04638 464 aa6.04□□□□□ -1.44
RFA1YAR007C NOP6Q07623 225 aaKnown RBP6.04□□□□□ -1.44
RFA1YAR007C TFB4Q12004 338 aa6.04□□□□□ -1.44
RFA1YAR007C NUR1Q12066 484 aa6.04□□□□□ -1.44
RFA1YAR007C RMP1Q12530 201 aa6.04□□□□□ -1.44
RFA1YAR007C SMC6Q12749 1114 aa6.04□□□□□ -1.44
RFA1YAR007C JIP3O13555 125 aa6.03□□□□□ -1.44
RFA1YAR007C MTF2P10849 440 aa6.03□□□□□ -1.44
RFA1YAR007C KRS1P15180 591 aaKnown RBP6.03□□□□□ -1.44
RFA1YAR007C URA1P28272 314 aaPredicted RBP6.03□□□□□ -1.44
RFA1YAR007C PDB1P32473 366 aaKnown RBP6.03□□□□□ -1.44
RFA1YAR007C YET1P35723 206 aa6.03□□□□□ -1.44
RFA1YAR007C OLA1P38219 394 aaKnown RBP6.03□□□□□ -1.44
RFA1YAR007C TPS3P38426 1054 aaKnown RBP6.03□□□□□ -1.44
RFA1YAR007C MRX1P40050 688 aa6.03□□□□□ -1.44
RFA1YAR007C SPO19Q03029 223 aa6.03□□□□□ -1.44
RFA1YAR007C VPS64Q03944 604 aa6.03□□□□□ -1.44
RFA1YAR007C SAS4Q04003 481 aa6.03□□□□□ -1.44
RFA1YAR007C LCB5Q06147 687 aaKnown RBP6.03□□□□□ -1.44
RFA1YAR007C CMS1Q07897 291 aaKnown RBP6.03□□□□□ -1.44
RFA1YAR007C HMI1Q12039 706 aa6.03□□□□□ -1.44
RFA1YAR007C FAS2P19097 1887 aaKnown RBP6.03□□□□□ -1.44
RFA1YAR007C GAL11P19659 1081 aa6.02□□□□□ -1.44
RFA1YAR007C HCA4P20448 770 aaKnown RBP6.02□□□□□ -1.44
RFA1YAR007C ARG1P22768 420 aa6.02□□□□□ -1.44
RFA1YAR007C PUP2P32379 260 aa6.02□□□□□ -1.44
RFA1YAR007C CNS1P33313 385 aa6.02□□□□□ -1.44
RFA1YAR007C YKR018CP36114 725 aa6.02□□□□□ -1.44
RFA1YAR007C EFM2P38347 419 aa6.02□□□□□ -1.44
RFA1YAR007C EIS1Q05050 843 aaKnown RBP6.02□□□□□ -1.44
RFA1YAR007C DCS2Q12123 353 aa6.02□□□□□ -1.44
RFA1YAR007C RRP6Q12149 733 aaKnown RBP6.02□□□□□ -1.44
RFA1YAR007C RPL22AP05749 121 aaKnown RBP6.02□□□□□ -1.45
RFA1YAR007C RAD57P25301 460 aa6.02□□□□□ -1.45
RFA1YAR007C SHQ1P40486 507 aaPredicted RBP6.02□□□□□ -1.45
RFA1YAR007C ISM1P48526 1002 aa6.02□□□□□ -1.45
RFA1YAR007C YLR001CQ07895 862 aa6.02□□□□□ -1.45
RFA1YAR007C CDC37P06101 506 aaKnown RBP6.01□□□□□ -1.45
RFA1YAR007C PFK2P16862 959 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
RFA1YAR007C SPO12P17123 173 aa6.01□□□□□ -1.45
RFA1YAR007C MRPS28P21771 286 aa6.01□□□□□ -1.45
RFA1YAR007C OPI1P21957 404 aa6.01□□□□□ -1.45
RFA1YAR007C AMS1P22855 1083 aa6.01□□□□□ -1.45
RFA1YAR007C FYV8P46949 817 aaKnown RBP6.01□□□□□ -1.45
RFA1YAR007C CUE3P53137 624 aaKnown RBP6.01□□□□□ -1.45
RFA1YAR007C NGL3Q03210 505 aa6.01□□□□□ -1.45
RFA1YAR007C LAM4P38800 1345 aa6.01□□□□□ -1.45
RFA1YAR007C CDC8P00572 216 aa6□□□□□ -1.45
RFA1YAR007C OSH3P38713 996 aaKnown RBP6□□□□□ -1.45
RFA1YAR007C CTM1P38818 585 aa6□□□□□ -1.45
RFA1YAR007C RPN10P38886 268 aaKnown RBP6□□□□□ -1.45
RFA1YAR007C YMR147WP40218 223 aaKnown RBP6□□□□□ -1.45
RFA1YAR007C ILM1P47155 203 aa6□□□□□ -1.45
RFA1YAR007C PXR1P53335 271 aaPredicted RBP6□□□□□ -1.45
RFA1YAR007C NCS2P53923 493 aaPredicted RBP6□□□□□ -1.45
RFA1YAR007C SEC5P89102 971 aa6□□□□□ -1.45
RFA1YAR007C INP54Q08227 384 aaKnown RBP6□□□□□ -1.45
RFA1YAR007C TY4A-HQ6Q5P6 413 aa6□□□□□ -1.45
RFA1YAR007C PRT1P06103 763 aaKnown RBP6□□□□□ -1.45
RFA1YAR007C CDC6P09119 513 aa6□□□□□ -1.45
RFA1YAR007C CBP3P21560 335 aa6□□□□□ -1.45
RFA1YAR007C NUD1P32336 851 aa6□□□□□ -1.45
RFA1YAR007C SRB4P32569 687 aa6□□□□□ -1.45
RFA1YAR007C YGR237CP50089 785 aa6□□□□□ -1.45
RFA1YAR007C ALD3P54114 506 aa6□□□□□ -1.45
RFA1YAR007C ADA2Q02336 434 aa6□□□□□ -1.45
RFA1YAR007C YLR287CQ05881 355 aa6□□□□□ -1.45
RFA1YAR007C VPS1P21576 704 aaKnown RBP5.99□□□□□ -1.45
RFA1YAR007C SPO11P23179 398 aa5.99□□□□□ -1.45
RFA1YAR007C SEC8P32855 1065 aa5.99□□□□□ -1.45
RFA1YAR007C HUL5P53119 910 aa5.99□□□□□ -1.45
RFA1YAR007C LSC2P53312 427 aa5.99□□□□□ -1.45
RFA1YAR007C CUS1Q02554 436 aaPredicted RBP5.99□□□□□ -1.45
RFA1YAR007C UME1Q03010 460 aa5.99□□□□□ -1.45
RFA1YAR007C PKH3Q03306 898 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 1334.5 ms