RNA–Protein interactions for RNA: YAL058W

CNE1, Transcript of Calnexin, yeastyeast

Gene CNE1, Length 1,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CNE1YAL058W PUS6P53294 404 aa6.8□□□□□ -1.32
CNE1YAL058W INM2Q05533 292 aa6.8□□□□□ -1.32
CNE1YAL058W HSP82P02829 709 aaKnown RBP6.79□□□□□ -1.32
CNE1YAL058W RGP1P16664 663 aa6.79□□□□□ -1.32
CNE1YAL058W DIT2P21595 489 aa6.79□□□□□ -1.32
CNE1YAL058W MDL2P33311 773 aa6.79□□□□□ -1.32
CNE1YAL058W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
CNE1YAL058W PTK1P36002 662 aaPredicted RBP6.79□□□□□ -1.32
CNE1YAL058W PCH2P38126 564 aa6.79□□□□□ -1.32
CNE1YAL058W RRT6P53117 311 aaPredicted RBP6.79□□□□□ -1.32
CNE1YAL058W UTP13Q05946 817 aaKnown RBP6.79□□□□□ -1.32
CNE1YAL058W TMA16Q08687 178 aa6.79□□□□□ -1.32
CNE1YAL058W HXK1P04806 485 aaKnown RBP6.78□□□□□ -1.32
CNE1YAL058W PET123P17558 318 aa6.78□□□□□ -1.32
CNE1YAL058W HCA4P20448 770 aaKnown RBP6.78□□□□□ -1.32
CNE1YAL058W BSD2P38356 321 aa6.78□□□□□ -1.32
CNE1YAL058W UTP7P40055 554 aaKnown RBP6.78□□□□□ -1.32
CNE1YAL058W MSH4P40965 878 aaPredicted RBP6.78□□□□□ -1.32
CNE1YAL058W MTC3P53077 123 aa6.78□□□□□ -1.32
CNE1YAL058W ELP4Q02884 456 aaKnown RBP6.78□□□□□ -1.32
CNE1YAL058W VPS60Q03390 229 aa6.78□□□□□ -1.32
CNE1YAL058W KAR5Q04746 504 aa6.78□□□□□ -1.32
CNE1YAL058W GAL2P13181 574 aa6.77□□□□□ -1.33
CNE1YAL058W PFK2P16862 959 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
CNE1YAL058W SPB4P25808 606 aaPredicted RBP6.77□□□□□ -1.33
CNE1YAL058W BCK2P33306 851 aa6.77□□□□□ -1.33
CNE1YAL058W MET1P36150 593 aa6.77□□□□□ -1.33
CNE1YAL058W RPN10P38886 268 aaKnown RBP6.77□□□□□ -1.33
CNE1YAL058W HAL5P38970 855 aaKnown RBP6.77□□□□□ -1.33
CNE1YAL058W AKR1P39010 764 aa6.77□□□□□ -1.33
CNE1YAL058W NIT1P40447 199 aa6.77□□□□□ -1.33
CNE1YAL058W TFG2P41896 400 aaPredicted RBP6.77□□□□□ -1.33
CNE1YAL058W DUS1P53759 423 aaKnown RBP6.77□□□□□ -1.33
CNE1YAL058W VPS75P53853 264 aa6.77□□□□□ -1.33
CNE1YAL058W PEX29Q03370 554 aa6.77□□□□□ -1.33
CNE1YAL058W SSF2Q12153 453 aaPredicted RBP6.77□□□□□ -1.33
CNE1YAL058W TAH18Q12181 623 aa6.77□□□□□ -1.33
CNE1YAL058W CSR2Q12734 1121 aa6.77□□□□□ -1.33
CNE1YAL058W CYB2P00175 591 aa6.76□□□□□ -1.33
CNE1YAL058W PET111P08468 800 aa6.76□□□□□ -1.33
CNE1YAL058W MRC1P25588 1096 aa6.76□□□□□ -1.33
CNE1YAL058W URA1P28272 314 aaPredicted RBP6.76□□□□□ -1.33
CNE1YAL058W BOI1P38041 980 aaKnown RBP6.76□□□□□ -1.33
CNE1YAL058W SMC3P47037 1230 aa6.76□□□□□ -1.33
CNE1YAL058W YDR344CQ05510 147 aa6.76□□□□□ -1.33
CNE1YAL058W PPM2Q08282 695 aa6.76□□□□□ -1.33
CNE1YAL058W DCS2Q12123 353 aa6.76□□□□□ -1.33
CNE1YAL058W NOP14Q99207 810 aaKnown RBP6.76□□□□□ -1.33
CNE1YAL058W PDC1P06169 563 aaKnown RBP6.76□□□□□ -1.33
CNE1YAL058W SNF3P10870 884 aa6.76□□□□□ -1.33
CNE1YAL058W VPS1P21576 704 aaKnown RBP6.76□□□□□ -1.33
CNE1YAL058W RER2P35196 286 aa6.76□□□□□ -1.33
CNE1YAL058W SIS2P36024 562 aa6.76□□□□□ -1.33
CNE1YAL058W CRG1P38892 291 aaRIP-Chip data6.76□□□□□ -1.33not detected
CNE1YAL058W ARH1P48360 493 aa6.76□□□□□ -1.33
CNE1YAL058W PIP2P52960 996 aa6.76□□□□□ -1.33
CNE1YAL058W EST2Q06163 884 aa6.76□□□□□ -1.33
CNE1YAL058W SPN1Q06505 410 aaPredicted RBP6.76□□□□□ -1.33
CNE1YAL058W YCG1Q06680 1035 aa6.76□□□□□ -1.33
CNE1YAL058W MCM16Q12262 181 aa6.76□□□□□ -1.33
CNE1YAL058W TIF6Q12522 245 aaKnown RBP6.76□□□□□ -1.33
CNE1YAL058W FLO1P32768 1537 aa6.75□□□□□ -1.33
CNE1YAL058W CDC6P09119 513 aa6.75□□□□□ -1.33
CNE1YAL058W CBP3P21560 335 aa6.75□□□□□ -1.33
CNE1YAL058W RRP43P25359 394 aaPredicted RBP6.75□□□□□ -1.33
CNE1YAL058W SPC110P32380 944 aa6.75□□□□□ -1.33
CNE1YAL058W GEF1P37020 779 aa6.75□□□□□ -1.33
CNE1YAL058W PCS60P38137 543 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
CNE1YAL058W RTT107P38850 1070 aa6.75□□□□□ -1.33
CNE1YAL058W PNT1P38969 423 aa6.75□□□□□ -1.33
CNE1YAL058W ENP2P48234 707 aaKnown RBP6.75□□□□□ -1.33
CNE1YAL058W TLG2Q08144 397 aa6.75□□□□□ -1.33
CNE1YAL058W YKL068W-AQ3E826 78 aa6.75□□□□□ -1.33
CNE1YAL058W MYO1P08964 1928 aa6.74□□□□□ -1.33
CNE1YAL058W GSC2P40989 1895 aa6.74□□□□□ -1.33
CNE1YAL058W CHO2P05374 869 aaKnown RBP6.74□□□□□ -1.33
CNE1YAL058W HVG1P0CE11 249 aa6.74□□□□□ -1.33
CNE1YAL058W COQ1P18900 473 aa6.74□□□□□ -1.33
CNE1YAL058W PHO13P19881 312 aa6.74□□□□□ -1.33
CNE1YAL058W UBC1P21734 215 aaKnown RBP6.74□□□□□ -1.33
CNE1YAL058W SWI4P25302 1093 aaKnown RBP6.74□□□□□ -1.33
CNE1YAL058W PXL1P36166 706 aa6.74□□□□□ -1.33
CNE1YAL058W TPS3P38426 1054 aaKnown RBP6.74□□□□□ -1.33
CNE1YAL058W APT1P49435 187 aaKnown RBP6.74□□□□□ -1.33
CNE1YAL058W HDA1P53973 706 aa6.74□□□□□ -1.33
CNE1YAL058W RRB1Q04225 511 aaKnown RBP6.74□□□□□ -1.33
CNE1YAL058W AFT2Q08957 416 aa6.74□□□□□ -1.33
CNE1YAL058W PMA1P05030 918 aaKnown RBP6.73□□□□□ -1.33
CNE1YAL058W STE11P23561 717 aa6.73□□□□□ -1.33
CNE1YAL058W ADP1P25371 1049 aa6.73□□□□□ -1.33
CNE1YAL058W CLB5P30283 435 aa6.73□□□□□ -1.33
CNE1YAL058W SEC9P40357 651 aa6.73□□□□□ -1.33
CNE1YAL058W IRC8P47046 822 aa6.73□□□□□ -1.33
CNE1YAL058W GET3Q12154 354 aaKnown RBP6.73□□□□□ -1.33
CNE1YAL058W GIN4Q12263 1142 aa6.73□□□□□ -1.33
CNE1YAL058W SRF1Q12516 437 aa6.73□□□□□ -1.33
CNE1YAL058W RAD53P22216 821 aa6.72□□□□□ -1.33
CNE1YAL058W SAC6P32599 642 aaKnown RBP6.72□□□□□ -1.33
CNE1YAL058W NPL4P33755 580 aa6.72□□□□□ -1.33
CNE1YAL058W GRX7P38068 203 aa6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms