RNA–Protein interactions for RNA: YAL031C

GIP4, Transcript of Cytoplasmic protein that regulates protein phosphatase 1 Glc7p, yeast

Gene GIP4, Length 2,283 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GIP4	YAL031C	DBP9	Q06218	594 aa	Known RBP	4.74	□□□□□ -1.65
GIP4	YAL031C	PUN1	Q06991	263 aa		4.74	□□□□□ -1.65
GIP4	YAL031C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
GIP4	YAL031C	REC107	P21651	314 aa		4.74	□□□□□ -1.65
GIP4	YAL031C	SRO9	P25567	434 aa	Known RBP	4.74	□□□□□ -1.65
GIP4	YAL031C	CDC60	P26637	1090 aa	Known RBP	4.74	□□□□□ -1.65
GIP4	YAL031C	PTP2	P29461	750 aa		4.74	□□□□□ -1.65
GIP4	YAL031C	RME1	P32338	300 aa	Known RBP	4.74	□□□□□ -1.65
GIP4	YAL031C	SFP1	P32432	683 aa		4.74	□□□□□ -1.65
GIP4	YAL031C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
GIP4	YAL031C	YIL166C	P40445	542 aa		4.74	□□□□□ -1.65
GIP4	YAL031C	RSC8	P43609	557 aa	Known RBP	4.74	□□□□□ -1.65
GIP4	YAL031C	PMT3	P47190	753 aa		4.74	□□□□□ -1.65
GIP4	YAL031C	NPY1	P53164	384 aa		4.74	□□□□□ -1.65
GIP4	YAL031C	CCP1	P00431	361 aa		4.73	□□□□□ -1.65
GIP4	YAL031C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
GIP4	YAL031C	ISF1	P32488	338 aa		4.73	□□□□□ -1.65
GIP4	YAL031C	PTH2	P34222	208 aa		4.73	□□□□□ -1.65
GIP4	YAL031C	HSM3	P38348	480 aa		4.73	□□□□□ -1.65
GIP4	YAL031C	EPS1	P40557	701 aa		4.73	□□□□□ -1.65
GIP4	YAL031C	GYP7	P48365	746 aa		4.73	□□□□□ -1.65
GIP4	YAL031C	VPS4	P52917	437 aa		4.73	□□□□□ -1.65
GIP4	YAL031C	YGR125W	P53273	1036 aa		4.73	□□□□□ -1.65
GIP4	YAL031C	YGR130C	P53278	816 aa		4.73	□□□□□ -1.65
GIP4	YAL031C	NCS2	P53923	493 aa	Predicted RBP	4.73	□□□□□ -1.65
GIP4	YAL031C	MCM16	Q12262	181 aa		4.73	□□□□□ -1.65
GIP4	YAL031C	LSO1	Q3E827	93 aa		4.73	□□□□□ -1.65
GIP4	YAL031C	ILS1	P09436	1072 aa	Known RBP	4.72	□□□□□ -1.65
GIP4	YAL031C	YGR153W	P48238	217 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	SHE10	P53075	577 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	YAP1802	P53309	568 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	TAF11	Q04226	346 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	TAP42	Q04372	366 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	YMR084W	A2P2R3	262 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	SEC2	P17065	759 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	RAD16	P31244	790 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	RIB7	P33312	244 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	OTU2	P38747	307 aa	Known RBP	4.72	□□□□□ -1.65
GIP4	YAL031C	ERR3	P42222	437 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	UPF3	P48412	387 aa	Known RBP	4.72	□□□□□ -1.65
GIP4	YAL031C	YML6	P51998	286 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	RTA1	P53047	317 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	YGR250C	P53316	781 aa	Known RBP	4.72	□□□□□ -1.65
GIP4	YAL031C	YNL193W	P53870	558 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	VPS30	Q02948	557 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	RGA2	Q06407	1009 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	BRE4	Q07660	1125 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	REX3	Q12090	404 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	TRS33	Q99394	268 aa		4.72	□□□□□ -1.65
GIP4	YAL031C	NUP145	P49687	1317 aa		4.71	□□□□□ -1.65
GIP4	YAL031C	TRP2	P00899	507 aa	Known RBP	4.71	□□□□□ -1.65
GIP4	YAL031C	CDC34	P14682	295 aa		4.71	□□□□□ -1.65
GIP4	YAL031C	MER1	P16523	270 aa		4.71	□□□□□ -1.65
GIP4	YAL031C	PHO87	P25360	923 aa		4.71	□□□□□ -1.65
GIP4	YAL031C	PPQ1	P32945	549 aa		4.71	□□□□□ -1.65
GIP4	YAL031C	PXA2	P34230	853 aa		4.71	□□□□□ -1.65
GIP4	YAL031C	HAL5	P38970	855 aa	Known RBP	4.71	□□□□□ -1.65
GIP4	YAL031C	TPA1	P40032	644 aa	Known RBP	4.71	□□□□□ -1.65
GIP4	YAL031C	SPO1	P53541	631 aa		4.71	□□□□□ -1.65
GIP4	YAL031C	TRS130	Q03660	1102 aa		4.71	□□□□□ -1.65
GIP4	YAL031C	CSR1	Q06705	408 aa	Known RBP	4.71	□□□□□ -1.65
GIP4	YAL031C	MDM38	Q08179	573 aa		4.71	□□□□□ -1.65
GIP4	YAL031C	ENV9	Q08651	330 aa		4.71	□□□□□ -1.65
GIP4	YAL031C	YRR1	Q12172	810 aa		4.71	□□□□□ -1.65
GIP4	YAL031C	HXK1	P04806	485 aa	Known RBP	4.71	□□□□□ -1.66
GIP4	YAL031C	RPC40	P07703	335 aa	Known RBP	4.71	□□□□□ -1.66
GIP4	YAL031C	PET111	P08468	800 aa		4.71	□□□□□ -1.66
GIP4	YAL031C	SEC23	P15303	768 aa	Known RBP	4.71	□□□□□ -1.66
GIP4	YAL031C	SAN1	P22470	610 aa		4.71	□□□□□ -1.66
GIP4	YAL031C	SUV3	P32580	737 aa		4.71	□□□□□ -1.66
GIP4	YAL031C	YBR184W	P38299	523 aa		4.71	□□□□□ -1.66
GIP4	YAL031C	FAA3	P39002	694 aa		4.71	□□□□□ -1.66
GIP4	YAL031C	SUM1	P46676	1062 aa		4.71	□□□□□ -1.66
GIP4	YAL031C	CCM1	P48237	864 aa	Predicted RBP	4.71	□□□□□ -1.66
GIP4	YAL031C	SAM37	P50110	327 aa		4.71	□□□□□ -1.66
GIP4	YAL031C	ARP9	Q05123	467 aa		4.71	□□□□□ -1.66
GIP4	YAL031C	YLR001C	Q07895	862 aa		4.71	□□□□□ -1.66
GIP4	YAL031C	SCM3	Q12334	223 aa		4.71	□□□□□ -1.66
GIP4	YAL031C	KCC4	P25389	1037 aa		4.7	□□□□□ -1.66
GIP4	YAL031C	RPL8B	P29453	256 aa	Known RBP	4.7	□□□□□ -1.66
GIP4	YAL031C	DAL1	P32375	460 aa		4.7	□□□□□ -1.66
GIP4	YAL031C	MKK2	P32491	506 aa		4.7	□□□□□ -1.66
GIP4	YAL031C	BEM3	P32873	1128 aa		4.7	□□□□□ -1.66
GIP4	YAL031C	MVP1	P40959	511 aa	Known RBP	4.7	□□□□□ -1.66
GIP4	YAL031C	AGX1	P43567	385 aa		4.7	□□□□□ -1.66
GIP4	YAL031C	CIT3	P43635	486 aa		4.7	□□□□□ -1.66
GIP4	YAL031C	YPP1	P46951	817 aa		4.7	□□□□□ -1.66
GIP4	YAL031C	CWH41	P53008	833 aa		4.7	□□□□□ -1.66
GIP4	YAL031C	FDC1	Q03034	503 aa		4.7	□□□□□ -1.66
GIP4	YAL031C	ARA2	Q04212	335 aa		4.7	□□□□□ -1.66
GIP4	YAL031C	EIS1	Q05050	843 aa	Known RBP	4.7	□□□□□ -1.66
GIP4	YAL031C	CIA1	Q05583	330 aa		4.7	□□□□□ -1.66
GIP4	YAL031C	CUE5	Q08412	411 aa	Known RBP	4.7	□□□□□ -1.66
GIP4	YAL031C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
GIP4	YAL031C	FAP7	Q12055	197 aa	Predicted RBP	4.7	□□□□□ -1.66
GIP4	YAL031C	MRE11	P32829	692 aa		4.7	□□□□□ -1.66
GIP4	YAL031C	CNS1	P33313	385 aa		4.7	□□□□□ -1.66
GIP4	YAL031C	NIC96	P34077	839 aa		4.7	□□□□□ -1.66
GIP4	YAL031C	BDF1	P35817	686 aa		4.7	□□□□□ -1.66
GIP4	YAL031C	RAD26	P40352	1085 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 181.6 ms