RNA–Protein interactions for RNA: ENST00000630804.2

SPTAN1-222, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTAN1, Length 7,812 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-222ENST00000630804 CABP2Q9NPB3 220 aa9.63□□□□□ -0.87
SPTAN1-222ENST00000630804 MCM3P25205 808 aa9.63□□□□□ -0.87
SPTAN1-222ENST00000630804 SEPT6Q14141 434 aa9.63□□□□□ -0.87
SPTAN1-222ENST00000630804 ARHGAP29Q52LW3 1261 aa9.63□□□□□ -0.87
SPTAN1-222ENST00000630804 TMEM87AQ8NBN3 555 aa9.63□□□□□ -0.87
SPTAN1-222ENST00000630804 AQRO60306 1485 aaKnown RBP eCLIP9.63□□□□□ -0.873e-7■■■□□ 18.7
SPTAN1-222ENST00000630804 SPG7Q9UQ90 795 aa9.63□□□□□ -0.87
SPTAN1-222ENST00000630804 TOM1L2Q6ZVM7 507 aa9.63□□□□□ -0.87
SPTAN1-222ENST00000630804 RBM42Q9BTD8 480 aaKnown RBP9.63□□□□□ -0.87
SPTAN1-222ENST00000630804 GGNBP2Q9H3C7 697 aa9.63□□□□□ -0.87
SPTAN1-222ENST00000630804 TMCO5BA8MYB1 307 aa9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 EIF5P55010 431 aaKnown RBP9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 TRIM22Q8IYM9 498 aa9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 PDCL2Q8N4E4 241 aa9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 UBE2Q2Q8WVN8 375 aa9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.62□□□□□ -0.871e-7■■□□□ 13
SPTAN1-222ENST00000630804 V9GYY5 206 aaPredicted RBP9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 PABPN1LA6NDY0 278 aaKnown RBP9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 GIGYF2Q6Y7W6 1299 aaKnown RBP9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 FSD1Q9BTV5 496 aa9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 RRP9O43818 475 aaKnown RBP9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 CDC45O75419 566 aa9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 HFM1A2PYH4 1435 aa9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 CLGNO14967 610 aa9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 PRG4Q92954 1404 aaPredicted RBP9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 CCDC160A6NGH7 325 aa9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 SSBP05455 408 aaKnown RBP eCLIP9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 PPP1R12BO60237 982 aaPredicted RBP9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 SPECC1Q5M775 1068 aa9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 LUZP1Q86V48 1076 aa9.62□□□□□ -0.87
SPTAN1-222ENST00000630804 CABP4P57796 275 aa9.61□□□□□ -0.87
SPTAN1-222ENST00000630804 CNNM1Q9NRU3 951 aa9.61□□□□□ -0.87
SPTAN1-222ENST00000630804 CALCOCO1Q9P1Z2 691 aa9.61□□□□□ -0.87
SPTAN1-222ENST00000630804 NCAPD3P42695 1498 aa9.61□□□□□ -0.87
SPTAN1-222ENST00000630804 AFAP1Q8N556 730 aa9.61□□□□□ -0.87
SPTAN1-222ENST00000630804 CASKIN1Q8WXD9 1431 aa9.61□□□□□ -0.87
SPTAN1-222ENST00000630804 CCDC158Q5M9N0 1113 aa9.61□□□□□ -0.87
SPTAN1-222ENST00000630804 NAP1L3Q99457 506 aaPredicted RBP9.61□□□□□ -0.87
SPTAN1-222ENST00000630804 MRC2Q9UBG0 1479 aa9.61□□□□□ -0.87
SPTAN1-222ENST00000630804 TMEM132EQ6IEE7 984 aa9.61□□□□□ -0.87
SPTAN1-222ENST00000630804 CTNNBL1Q8WYA6 563 aaPredicted RBP9.61□□□□□ -0.87
SPTAN1-222ENST00000630804 LARP1Q6PKG0 1096 aaKnown RBP9.61□□□□□ -0.87
SPTAN1-222ENST00000630804 RAB3IL1Q8TBN0 382 aa9.6□□□□□ -0.87
SPTAN1-222ENST00000630804 MTHFSP49914 203 aa9.6□□□□□ -0.87
SPTAN1-222ENST00000630804 SPECC1LQ69YQ0 1117 aa9.6□□□□□ -0.87
SPTAN1-222ENST00000630804 ZNF526Q8TF50 670 aaPredicted RBP9.6□□□□□ -0.87
SPTAN1-222ENST00000630804 TAOK3Q9H2K8 898 aa9.6□□□□□ -0.87
SPTAN1-222ENST00000630804 IFT140Q96RY7 1462 aa9.6□□□□□ -0.87
SPTAN1-222ENST00000630804 PRDM11Q9NQV5 511 aa9.6□□□□□ -0.87
SPTAN1-222ENST00000630804 WDHD1O75717 1129 aaPredicted RBP9.6□□□□□ -0.87
SPTAN1-222ENST00000630804 SPA17Q15506 151 aa9.6□□□□□ -0.87
SPTAN1-222ENST00000630804 CCDC178Q5BJE1 867 aa9.6□□□□□ -0.87
SPTAN1-222ENST00000630804 SSX2IPQ9Y2D8 614 aa9.6□□□□□ -0.87
SPTAN1-222ENST00000630804 CNTLNQ9NXG0 1405 aa9.6□□□□□ -0.87
SPTAN1-222ENST00000630804 WDR70Q9NW82 654 aa9.6□□□□□ -0.87
SPTAN1-222ENST00000630804 NEK4P51957 841 aa9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 NACAP1Q9BZK3 213 aa9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 TNNT1P13805 278 aa9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 CTNNA2P26232 953 aa9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 NOL7Q9UMY1 257 aaKnown RBP9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 LRRC9Q6ZRR7 1453 aa9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 PRAM1Q96QH2 718 aa9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 MPHOSPH8Q99549 860 aa9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 FSD2A1L4K1 749 aa9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 FBF1Q8TES7 1133 aa9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 MACROD2A1Z1Q3 448 aa9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 ZNF76P36508 570 aa9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 CEP57L1Q8IYX8 460 aa9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 MPNDQ8N594 471 aa9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 TSNARE1Q96NA8 513 aa9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 CCDC69A6NI79 296 aa9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 NUTM2BA6NNL0 878 aaPredicted RBP9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 NUTM2EB1AL46 878 aaPredicted RBP9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 SURF6O75683 361 aaKnown RBP9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 NUTM2AQ8IVF1 878 aaPredicted RBP9.59□□□□□ -0.87
SPTAN1-222ENST00000630804 CCDC57Q2TAC2 916 aa9.58□□□□□ -0.88
SPTAN1-222ENST00000630804 VPS36Q86VN1 386 aa9.58□□□□□ -0.88
SPTAN1-222ENST00000630804 NCOA2Q15596 1464 aa9.58□□□□□ -0.88
SPTAN1-222ENST00000630804 CASQ1P31415 396 aa9.58□□□□□ -0.88
SPTAN1-222ENST00000630804 ZNF644Q9H582 1327 aaPredicted RBP9.58□□□□□ -0.88
SPTAN1-222ENST00000630804 EFCAB5A4FU69 1503 aa9.58□□□□□ -0.88
SPTAN1-222ENST00000630804 SMTNL1A8MU46 457 aa9.58□□□□□ -0.88
SPTAN1-222ENST00000630804 ANKRD1Q15327 319 aa9.58□□□□□ -0.88
SPTAN1-222ENST00000630804 FAM177BA6PVY3 158 aa9.58□□□□□ -0.88
SPTAN1-222ENST00000630804 KRT85P78386 507 aa9.58□□□□□ -0.88
SPTAN1-222ENST00000630804 ZSCAN25Q6NSZ9 544 aa9.58□□□□□ -0.88
SPTAN1-222ENST00000630804 GNAI2P04899 355 aa9.58□□□□□ -0.88
SPTAN1-222ENST00000630804 DDX46Q7L014 1031 aaKnown RBP9.58□□□□□ -0.88
SPTAN1-222ENST00000630804 BRD4O60885 1362 aaPredicted RBP9.58□□□□□ -0.88
SPTAN1-222ENST00000630804 FILIP1Q7Z7B0 1213 aa9.58□□□□□ -0.88
SPTAN1-222ENST00000630804 HECW1Q76N89 1606 aa9.58□□□□□ -0.88
SPTAN1-222ENST00000630804 PPP1R14CQ8TAE6 165 aa9.57□□□□□ -0.88
SPTAN1-222ENST00000630804 SUPT6HQ7KZ85 1726 aaKnown RBP9.57□□□□□ -0.88
SPTAN1-222ENST00000630804 RUSC2Q8N2Y8 1516 aa9.57□□□□□ -0.88
SPTAN1-222ENST00000630804 KIF5CO60282 957 aa9.57□□□□□ -0.88
SPTAN1-222ENST00000630804 HDGFL1Q5TGJ6 251 aa9.57□□□□□ -0.88
SPTAN1-222ENST00000630804 PAXIP1Q6ZW49 1069 aaPredicted RBP9.57□□□□□ -0.88
SPTAN1-222ENST00000630804 CCDC150Q8NCX0 1101 aa9.57□□□□□ -0.88
SPTAN1-222ENST00000630804 SREK1Q8WXA9 508 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms