RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 NF2P35240 595 aa8.75□□□□□ -1.01
PDE6A-205ENST00000617647 CCDC102AQ96A19 550 aa8.75□□□□□ -1.01
PDE6A-205ENST00000617647 CLIP2Q9UDT6 1046 aa8.75□□□□□ -1.01
PDE6A-205ENST00000617647 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.75□□□□□ -1.01
PDE6A-205ENST00000617647 MIA2Q96PC5 1412 aa8.75□□□□□ -1.01
PDE6A-205ENST00000617647 DENND4BO75064 1496 aaPredicted RBP8.75□□□□□ -1.01
PDE6A-205ENST00000617647 NKTRP30414 1462 aaKnown RBP8.75□□□□□ -1.01
PDE6A-205ENST00000617647 GRIN2BQ13224 1484 aa8.75□□□□□ -1.01
PDE6A-205ENST00000617647 CYP2C19P33261 490 aa8.75□□□□□ -1.01
PDE6A-205ENST00000617647 KIAA1524Q8TCG1 905 aa8.75□□□□□ -1.01
PDE6A-205ENST00000617647 ZNF692Q9BU19 519 aaPredicted RBP8.75□□□□□ -1.01
PDE6A-205ENST00000617647 PKP1Q13835 747 aa8.75□□□□□ -1.01
PDE6A-205ENST00000617647 CHD1LQ86WJ1 897 aa8.75□□□□□ -1.01
PDE6A-205ENST00000617647 FBXW7Q969H0 707 aa8.75□□□□□ -1.01
PDE6A-205ENST00000617647 CFAP53Q96M91 514 aa8.75□□□□□ -1.01
PDE6A-205ENST00000617647 DNAJC5Q9H3Z4 198 aa8.75□□□□□ -1.01
PDE6A-205ENST00000617647 MRVI1Q9Y6F6 885 aa8.75□□□□□ -1.01
PDE6A-205ENST00000617647 BRPF1P55201 1214 aaPredicted RBP8.74□□□□□ -1.01
PDE6A-205ENST00000617647 FAM177A1Q8N128 213 aaPredicted RBP8.74□□□□□ -1.01
PDE6A-205ENST00000617647 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.74□□□□□ -1.01
PDE6A-205ENST00000617647 NPM1P06748 294 aaKnown RBP eCLIP8.74□□□□□ -1.01
PDE6A-205ENST00000617647 OAS2P29728 719 aaKnown RBP8.74□□□□□ -1.01
PDE6A-205ENST00000617647 EIF3JO75822 258 aaKnown RBP8.74□□□□□ -1.01
PDE6A-205ENST00000617647 PPP2R1AP30153 589 aa8.74□□□□□ -1.01
PDE6A-205ENST00000617647 KMT5BQ4FZB7 885 aa8.74□□□□□ -1.01
PDE6A-205ENST00000617647 FBXO38Q6PIJ6 1188 aa8.74□□□□□ -1.01
PDE6A-205ENST00000617647 TBC1D9Q6ZT07 1266 aa8.74□□□□□ -1.01
PDE6A-205ENST00000617647 TULP2O00295 520 aa8.73□□□□□ -1.01
PDE6A-205ENST00000617647 KIF1CO43896 1103 aaKnown RBP8.73□□□□□ -1.01
PDE6A-205ENST00000617647 URI1O94763 535 aaPredicted RBP8.73□□□□□ -1.01
PDE6A-205ENST00000617647 CASTP20810 708 aaKnown RBP8.73□□□□□ -1.01
PDE6A-205ENST00000617647 PSEN1P49768 467 aa8.73□□□□□ -1.01
PDE6A-205ENST00000617647 SYCP1Q15431 976 aa8.73□□□□□ -1.01
PDE6A-205ENST00000617647 CPSF2Q9P2I0 782 aaKnown RBP8.73□□□□□ -1.01
PDE6A-205ENST00000617647 TNNQ9UQP3 1299 aa8.73□□□□□ -1.01
PDE6A-205ENST00000617647 WDR33Q9C0J8 1336 aaKnown RBP8.73□□□□□ -1.01
PDE6A-205ENST00000617647 VPS37CA5D8V6 355 aaPredicted RBP8.73□□□□□ -1.01
PDE6A-205ENST00000617647 CD2BP2O95400 341 aaKnown RBP8.73□□□□□ -1.01
PDE6A-205ENST00000617647 CAMK4Q16566 473 aa8.73□□□□□ -1.01
PDE6A-205ENST00000617647 GOLGA5Q8TBA6 731 aa8.73□□□□□ -1.01
PDE6A-205ENST00000617647 CCDC171Q6TFL3 1326 aa8.73□□□□□ -1.01
PDE6A-205ENST00000617647 SMC2O95347 1197 aa8.73□□□□□ -1.01
PDE6A-205ENST00000617647 LIG1P18858 919 aa8.73□□□□□ -1.01
PDE6A-205ENST00000617647 MMP14P50281 582 aa8.73□□□□□ -1.01
PDE6A-205ENST00000617647 CALR3Q96L12 384 aaKnown RBP8.73□□□□□ -1.01
PDE6A-205ENST00000617647 VPS18Q9P253 973 aa8.73□□□□□ -1.01
PDE6A-205ENST00000617647 MCTP2Q6DN12 878 aa8.72□□□□□ -1.01
PDE6A-205ENST00000617647 USP48Q86UV5 1035 aa8.72□□□□□ -1.01
PDE6A-205ENST00000617647 BICD2Q8TD16 824 aa8.72□□□□□ -1.01
PDE6A-205ENST00000617647 DDX11Q96FC9 970 aa8.72□□□□□ -1.01
PDE6A-205ENST00000617647 SPTLC3Q9NUV7 552 aa8.72□□□□□ -1.01
PDE6A-205ENST00000617647 ANKRD65E5RJM6 399 aa8.72□□□□□ -1.01
PDE6A-205ENST00000617647 KIAA0754O94854 1291 aa8.72□□□□□ -1.01
PDE6A-205ENST00000617647 LRMPQ12912 555 aa8.72□□□□□ -1.01
PDE6A-205ENST00000617647 SNW1Q13573 536 aaKnown RBP8.72□□□□□ -1.01
PDE6A-205ENST00000617647 TICAM2Q86XR7 235 aa8.72□□□□□ -1.01
PDE6A-205ENST00000617647 PAIP2Q9BPZ3 127 aaKnown RBP8.72□□□□□ -1.01
PDE6A-205ENST00000617647 SRRTQ9BXP5 876 aaKnown RBP8.72□□□□□ -1.01
PDE6A-205ENST00000617647 FAM107BQ9H098 131 aa8.72□□□□□ -1.01
PDE6A-205ENST00000617647 PBRM1Q86U86 1689 aa8.72□□□□□ -1.01
PDE6A-205ENST00000617647 MAP2K1Q02750 393 aaPredicted RBP8.72□□□□□ -1.01
PDE6A-205ENST00000617647 ERCC6LQ2NKX8 1250 aa8.72□□□□□ -1.01
PDE6A-205ENST00000617647 PDRG1Q9NUG6 133 aa8.72□□□□□ -1.01
PDE6A-205ENST00000617647 NSFL1CQ9UNZ2 370 aaKnown RBP8.72□□□□□ -1.01
PDE6A-205ENST00000617647 IQGAP2Q13576 1575 aa8.72□□□□□ -1.01
PDE6A-205ENST00000617647 TRHP20396 242 aaPredicted RBP8.71□□□□□ -1.01
PDE6A-205ENST00000617647 CDR1P51861 262 aa8.71□□□□□ -1.01
PDE6A-205ENST00000617647 RARSP54136 660 aaKnown RBP8.71□□□□□ -1.01
PDE6A-205ENST00000617647 DNAJC21Q5F1R6 531 aaKnown RBP8.71□□□□□ -1.01
PDE6A-205ENST00000617647 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.71□□□□□ -1.01
PDE6A-205ENST00000617647 UGGT2Q9NYU1 1516 aa8.71□□□□□ -1.01
PDE6A-205ENST00000617647 NAIPQ13075 1403 aa8.71□□□□□ -1.01
PDE6A-205ENST00000617647 ATP2B1P20020 1258 aa8.71□□□□□ -1.01
PDE6A-205ENST00000617647 CEP120Q8N960 986 aa8.71□□□□□ -1.01
PDE6A-205ENST00000617647 SLC24A3Q9HC58 644 aa8.71□□□□□ -1.01
PDE6A-205ENST00000617647 RAI14Q9P0K7 980 aa8.71□□□□□ -1.01
PDE6A-205ENST00000617647 CTIFO43310 598 aaKnown RBP8.71□□□□□ -1.02
PDE6A-205ENST00000617647 SKILP12757 684 aa8.71□□□□□ -1.02
PDE6A-205ENST00000617647 MX1P20591 662 aa8.71□□□□□ -1.02
PDE6A-205ENST00000617647 MCM6Q14566 821 aa8.71□□□□□ -1.02
PDE6A-205ENST00000617647 TNMDQ9H2S6 317 aa8.71□□□□□ -1.02
PDE6A-205ENST00000617647 ARFGAP3Q9NP61 516 aa8.71□□□□□ -1.02
PDE6A-205ENST00000617647 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.71□□□□□ -1.02
PDE6A-205ENST00000617647 STK26Q9P289 416 aa8.71□□□□□ -1.02
PDE6A-205ENST00000617647 MAGI3Q5TCQ9 1506 aa8.71□□□□□ -1.02
PDE6A-205ENST00000617647 RLBP1P12271 317 aa8.7□□□□□ -1.02
PDE6A-205ENST00000617647 DHX8Q14562 1220 aaKnown RBP8.7□□□□□ -1.02
PDE6A-205ENST00000617647 FAM43BQ6ZT52 329 aaPredicted RBP8.7□□□□□ -1.02
PDE6A-205ENST00000617647 DONSONQ9NYP3 566 aa8.7□□□□□ -1.02
PDE6A-205ENST00000617647 SMC3Q9UQE7 1217 aa8.7□□□□□ -1.02
PDE6A-205ENST00000617647 MAGEA9P43362 315 aa8.7□□□□□ -1.02
PDE6A-205ENST00000617647 NUP62CLQ9H1M0 184 aa8.7□□□□□ -1.02
PDE6A-205ENST00000617647 C1orf115Q9H7X2 142 aa8.7□□□□□ -1.02
PDE6A-205ENST00000617647 U2AF1L5P0DN76 240 aaPredicted RBP8.7□□□□□ -1.02
PDE6A-205ENST00000617647 U2AF1Q01081 240 aaKnown RBP eCLIP8.7□□□□□ -1.02
PDE6A-205ENST00000617647 SMC1AQ14683 1233 aaKnown RBP8.7□□□□□ -1.02
PDE6A-205ENST00000617647 MAP3K11Q16584 847 aa8.7□□□□□ -1.02
PDE6A-205ENST00000617647 BMP2KLQ5H9B9 411 aa8.7□□□□□ -1.02
PDE6A-205ENST00000617647 SRLQ86TD4 932 aa8.7□□□□□ -1.02
PDE6A-205ENST00000617647 CKAP2LQ8IYA6 745 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms