RNA–Protein interactions for RNA: ENST00000615043.1

PCDH15-228, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-228ENST00000615043 WWC1Q8IX03 1113 aa13.61□□□□□ -0.23
PCDH15-228ENST00000615043 CABLES1Q8TDN4 633 aa13.61□□□□□ -0.23
PCDH15-228ENST00000615043 PRM3Q9NNZ6 103 aa13.61□□□□□ -0.23
PCDH15-228ENST00000615043 KIAA1468Q9P260 1216 aa13.61□□□□□ -0.23
PCDH15-228ENST00000615043 PPP1R15AO75807 674 aaPredicted RBP13.6□□□□□ -0.23
PCDH15-228ENST00000615043 GCGRP47871 477 aa13.6□□□□□ -0.23
PCDH15-228ENST00000615043 USP46P62068 366 aa13.6□□□□□ -0.23
PCDH15-228ENST00000615043 ZNF326Q5BKZ1 582 aaKnown RBP13.6□□□□□ -0.23
PCDH15-228ENST00000615043 PRPF38BQ5VTL8 546 aaKnown RBP13.6□□□□□ -0.23
PCDH15-228ENST00000615043 UBR1Q8IWV7 1749 aa13.59□□□□□ -0.23
PCDH15-228ENST00000615043 PPLO60437 1756 aa13.59□□□□□ -0.23
PCDH15-228ENST00000615043 ABL2P42684 1182 aa13.59□□□□□ -0.23
PCDH15-228ENST00000615043 DCAF11Q8TEB1 546 aa13.59□□□□□ -0.23
PCDH15-228ENST00000615043 ZBED2Q9BTP6 218 aa13.59□□□□□ -0.23
PCDH15-228ENST00000615043 KDM5AP29375 1690 aaKnown RBP13.59□□□□□ -0.23
PCDH15-228ENST00000615043 HOXA2O43364 376 aa13.58□□□□□ -0.24
PCDH15-228ENST00000615043 A2ML1A8K2U0 1454 aa13.58□□□□□ -0.24
PCDH15-228ENST00000615043 NEXMIFQ5QGS0 1516 aa13.58□□□□□ -0.24
PCDH15-228ENST00000615043 USP17L8P0C7I0 530 aa13.57□□□□□ -0.24
PCDH15-228ENST00000615043 FDX1P10109 184 aa13.57□□□□□ -0.24
PCDH15-228ENST00000615043 ZBTB3Q9H5J0 574 aa13.57□□□□□ -0.24
PCDH15-228ENST00000615043 CEP170BQ9Y4F5 1589 aaPredicted RBP13.57□□□□□ -0.24
PCDH15-228ENST00000615043 ZNF142P52746 1687 aaPredicted RBP13.56□□□□□ -0.24
PCDH15-228ENST00000615043 UHRF1BP1Q6BDS2 1440 aa13.56□□□□□ -0.24
PCDH15-228ENST00000615043 MYOM2P54296 1465 aa13.56□□□□□ -0.24
PCDH15-228ENST00000615043 TBC1D2BQ9UPU7 963 aa13.56□□□□□ -0.24
PCDH15-228ENST00000615043 PRAG1Q86YV5 1406 aa13.56□□□□□ -0.24
PCDH15-228ENST00000615043 SWT1Q5T5J6 900 aaKnown RBP13.55□□□□□ -0.24
PCDH15-228ENST00000615043 RPGRIP1LQ68CZ1 1315 aa13.55□□□□□ -0.24
PCDH15-228ENST00000615043 SLC10A3P09131 477 aa13.54□□□□□ -0.24
PCDH15-228ENST00000615043 NBPF8Q3BBV2 869 aa13.54□□□□□ -0.24
PCDH15-228ENST00000615043 PSEN2P49810 448 aa13.53□□□□□ -0.24
PCDH15-228ENST00000615043 TRPM1Q7Z4N2 1603 aa13.53□□□□□ -0.24
PCDH15-228ENST00000615043 PCDHGC3Q9UN70 934 aa13.52□□□□□ -0.25
PCDH15-228ENST00000615043 RIMS2Q9UQ26 1411 aa13.52□□□□□ -0.25
PCDH15-228ENST00000615043 RALGAPBQ86X10 1494 aa13.52□□□□□ -0.25
PCDH15-228ENST00000615043 NRXN1Q9ULB1 1477 aa13.52□□□□□ -0.25
PCDH15-228ENST00000615043 SETD1BQ9UPS6 1966 aaKnown RBP13.52□□□□□ -0.25
PCDH15-228ENST00000615043 ZFYVE9O95405 1425 aa13.51□□□□□ -0.25
PCDH15-228ENST00000615043 GUCA2AQ02747 115 aa13.51□□□□□ -0.25
PCDH15-228ENST00000615043 STAC3Q96MF2 364 aa13.51□□□□□ -0.25
PCDH15-228ENST00000615043 RABGEF1Q9UJ41 708 aa13.51□□□□□ -0.25
PCDH15-228ENST00000615043 TMEM2Q9UHN6 1383 aa13.5□□□□□ -0.25
PCDH15-228ENST00000615043 ADGRF5Q8IZF2 1346 aa13.5□□□□□ -0.25
PCDH15-228ENST00000615043 HLA-CQ95604 372 aa13.5□□□□□ -0.25
PCDH15-228ENST00000615043 CALR3Q96L12 384 aaKnown RBP13.5□□□□□ -0.25
PCDH15-228ENST00000615043 SEPT9Q9UHD8 586 aaPredicted RBP13.5□□□□□ -0.25
PCDH15-228ENST00000615043 PIK3C2GO75747 1445 aa13.49□□□□□ -0.25
PCDH15-228ENST00000615043 POM121CA8CG34 1229 aa13.49□□□□□ -0.25
PCDH15-228ENST00000615043 HDGFP51858 240 aaKnown RBP13.49□□□□□ -0.25
PCDH15-228ENST00000615043 KIAA1210Q9ULL0 1709 aa13.49□□□□□ -0.25
PCDH15-228ENST00000615043 SLIT1O75093 1534 aa13.49□□□□□ -0.25
PCDH15-228ENST00000615043 GJD4Q96KN9 370 aaPredicted RBP13.48□□□□□ -0.25
PCDH15-228ENST00000615043 NDUFB9Q9Y6M9 179 aa13.48□□□□□ -0.25
PCDH15-228ENST00000615043 ARHGAP23Q9P227 1491 aa13.48□□□□□ -0.25
PCDH15-228ENST00000615043 ZBTB7CA1YPR0 619 aa13.47□□□□□ -0.25
PCDH15-228ENST00000615043 ARHGAP33O14559 1287 aa13.47□□□□□ -0.25
PCDH15-228ENST00000615043 MTMR2Q13614 643 aa13.47□□□□□ -0.25
PCDH15-228ENST00000615043 THEMISQ8N1K5 641 aaPredicted RBP13.47□□□□□ -0.25
PCDH15-228ENST00000615043 ROCK2O75116 1388 aaKnown RBP13.46□□□□□ -0.25
PCDH15-228ENST00000615043 LAMC1P11047 1609 aa13.46□□□□□ -0.25
PCDH15-228ENST00000615043 SLC4A3P48751 1232 aa13.46□□□□□ -0.25
PCDH15-228ENST00000615043 CTDSPL2Q05D32 466 aa13.46□□□□□ -0.25
PCDH15-228ENST00000615043 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.46□□□□□ -0.25
PCDH15-228ENST00000615043 GLMNQ92990 594 aa13.46□□□□□ -0.25
PCDH15-228ENST00000615043 SLC4A5Q9BY07 1137 aa13.46□□□□□ -0.25
PCDH15-228ENST00000615043 IQGAP1P46940 1657 aa13.45□□□□□ -0.26
PCDH15-228ENST00000615043 SCAF11Q99590 1463 aaKnown RBP13.44□□□□□ -0.26
PCDH15-228ENST00000615043 NRXN3Q9Y4C0 1643 aa13.44□□□□□ -0.26
PCDH15-228ENST00000615043 HELBQ8NG08 1087 aaPredicted RBP13.44□□□□□ -0.26
PCDH15-228ENST00000615043 TRAIPQ9BWF2 469 aa13.44□□□□□ -0.26
PCDH15-228ENST00000615043 SETBP1Q9Y6X0 1596 aa13.44□□□□□ -0.26
PCDH15-228ENST00000615043 GPRASP1Q5JY77 1395 aa13.44□□□□□ -0.26
PCDH15-228ENST00000615043 FAM98CQ17RN3 349 aaKnown RBP13.43□□□□□ -0.26
PCDH15-228ENST00000615043 NBPF1Q3BBV0 1214 aa13.43□□□□□ -0.26
PCDH15-228ENST00000615043 GRIPAP1Q4V328 841 aa13.43□□□□□ -0.26
PCDH15-228ENST00000615043 CFAP70Q5T0N1 1121 aa13.43□□□□□ -0.26
PCDH15-228ENST00000615043 POTEEQ6S8J3 1075 aa13.43□□□□□ -0.26
PCDH15-228ENST00000615043 TXNDC2Q86VQ3 553 aa13.43□□□□□ -0.26
PCDH15-228ENST00000615043 SLF2Q8IX21 1173 aa13.43□□□□□ -0.26
PCDH15-228ENST00000615043 TSC1Q92574 1164 aa13.43□□□□□ -0.26
PCDH15-228ENST00000615043 NECTIN2Q92692 538 aa13.43□□□□□ -0.26
PCDH15-228ENST00000615043 HMX1Q9NP08 348 aaPredicted RBP13.43□□□□□ -0.26
PCDH15-228ENST00000615043 EID1Q9Y6B2 187 aa13.43□□□□□ -0.26
PCDH15-228ENST00000615043 ERBB3P21860 1342 aa13.42□□□□□ -0.26
PCDH15-228ENST00000615043 POLR1AO95602 1720 aaPredicted RBP13.42□□□□□ -0.26
PCDH15-228ENST00000615043 LTKP29376 864 aa13.42□□□□□ -0.26
PCDH15-228ENST00000615043 FUT2Q10981 343 aa13.42□□□□□ -0.26
PCDH15-228ENST00000615043 IRF5Q13568 498 aa13.42□□□□□ -0.26
PCDH15-228ENST00000615043 DMRTA1Q5VZB9 504 aa13.42□□□□□ -0.26
PCDH15-228ENST00000615043 CARD11Q9BXL7 1154 aa13.42□□□□□ -0.26
PCDH15-228ENST00000615043 PLEKHG1Q9ULL1 1385 aa13.42□□□□□ -0.26
PCDH15-228ENST00000615043 ALKQ9UM73 1620 aa13.42□□□□□ -0.26
PCDH15-228ENST00000615043 SETD1AO15047 1707 aaKnown RBP13.42□□□□□ -0.26
PCDH15-228ENST00000615043 ASXL1Q8IXJ9 1541 aa13.41□□□□□ -0.26
PCDH15-228ENST00000615043 C6orf229H3BNL8 230 aa13.41□□□□□ -0.26
PCDH15-228ENST00000615043 VARS2Q5ST30 1063 aaKnown RBP13.41□□□□□ -0.26
PCDH15-228ENST00000615043 TRIM34Q9BYJ4 488 aa13.41□□□□□ -0.26
PCDH15-228ENST00000615043 C14orf93Q9H972 538 aaKnown RBP13.41□□□□□ -0.26
PCDH15-228ENST00000615043 AXIN2Q9Y2T1 843 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms