RNA–Protein interactions for RNA: ENST00000582933.5

PPP4R1-223, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-223ENST00000582933 SMG6Q86US8 1419 aaKnown RBP8.14□□□□□ -1.11
PPP4R1-223ENST00000582933 ERBB3P21860 1342 aa8.14□□□□□ -1.11
PPP4R1-223ENST00000582933 MAP3K19Q56UN5 1328 aa8.14□□□□□ -1.11
PPP4R1-223ENST00000582933 WDR17Q8IZU2 1322 aa8.14□□□□□ -1.11
PPP4R1-223ENST00000582933 ZBTB7CA1YPR0 619 aa8.14□□□□□ -1.11
PPP4R1-223ENST00000582933 LARP1Q6PKG0 1096 aaKnown RBP8.14□□□□□ -1.11
PPP4R1-223ENST00000582933 STRN4Q9NRL3 753 aa8.14□□□□□ -1.11
PPP4R1-223ENST00000582933 CCDC9Q9Y3X0 531 aaKnown RBP8.14□□□□□ -1.11
PPP4R1-223ENST00000582933 LTN1O94822 1766 aa8.14□□□□□ -1.11
PPP4R1-223ENST00000582933 FLT4P35916 1363 aa8.13□□□□□ -1.11
PPP4R1-223ENST00000582933 NPC1L1Q9UHC9 1359 aa8.13□□□□□ -1.11
PPP4R1-223ENST00000582933 AXIN2Q9Y2T1 843 aa8.13□□□□□ -1.11
PPP4R1-223ENST00000582933 KNSTRNQ9Y448 316 aa8.13□□□□□ -1.11
PPP4R1-223ENST00000582933 DISP2A7MBM2 1401 aa8.12□□□□□ -1.11
PPP4R1-223ENST00000582933 PEAK1Q9H792 1746 aa8.12□□□□□ -1.11
PPP4R1-223ENST00000582933 FAM208AQ9UK61 1670 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-223ENST00000582933 SOCS7O14512 581 aa8.12□□□□□ -1.11
PPP4R1-223ENST00000582933 ONECUT3O60422 494 aaPredicted RBP8.12□□□□□ -1.11
PPP4R1-223ENST00000582933 HOXC9P31274 260 aa8.12□□□□□ -1.11
PPP4R1-223ENST00000582933 EVA1CP58658 441 aa8.12□□□□□ -1.11
PPP4R1-223ENST00000582933 FAM98CQ17RN3 349 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-223ENST00000582933 BARGINQ6ZT62 677 aa8.12□□□□□ -1.11
PPP4R1-223ENST00000582933 TCP11L2Q8N4U5 519 aa8.12□□□□□ -1.11
PPP4R1-223ENST00000582933 IP6K1Q92551 441 aa8.12□□□□□ -1.11
PPP4R1-223ENST00000582933 INSRP06213 1382 aa8.11□□□□□ -1.11
PPP4R1-223ENST00000582933 LRRC37A3O60309 1634 aa8.11□□□□□ -1.11
PPP4R1-223ENST00000582933 PER1O15534 1290 aaPredicted RBP8.11□□□□□ -1.11
PPP4R1-223ENST00000582933 RRS1Q15050 365 aaKnown RBP8.11□□□□□ -1.11
PPP4R1-223ENST00000582933 SEPT12Q8IYM1 358 aa8.11□□□□□ -1.11
PPP4R1-223ENST00000582933 VSIG10Q8N0Z9 540 aa8.11□□□□□ -1.11
PPP4R1-223ENST00000582933 ARID3AQ99856 593 aa8.11□□□□□ -1.11
PPP4R1-223ENST00000582933 THRAP3Q9Y2W1 955 aaKnown RBP8.11□□□□□ -1.11
PPP4R1-223ENST00000582933 PARP4Q9UKK3 1724 aaKnown RBP8.1□□□□□ -1.11
PPP4R1-223ENST00000582933 CSB-PGBD3P0DP91 1061 aa8.1□□□□□ -1.11
PPP4R1-223ENST00000582933 AMPHP49418 695 aa8.1□□□□□ -1.11
PPP4R1-223ENST00000582933 TOM1L2Q6ZVM7 507 aa8.1□□□□□ -1.11
PPP4R1-223ENST00000582933 ANKRD24Q8TF21 1146 aa8.1□□□□□ -1.11
PPP4R1-223ENST00000582933 CARD10Q9BWT7 1032 aa8.1□□□□□ -1.11
PPP4R1-223ENST00000582933 EMILIN1Q9Y6C2 1016 aa8.1□□□□□ -1.11
PPP4R1-223ENST00000582933 TNS2Q63HR2 1409 aa8.1□□□□□ -1.11
PPP4R1-223ENST00000582933 WNK3Q9BYP7 1800 aa8.1□□□□□ -1.11
PPP4R1-223ENST00000582933 A0A0G2JS52 829 aa8.09□□□□□ -1.11
PPP4R1-223ENST00000582933 FBLN1P23142 703 aa8.09□□□□□ -1.11
PPP4R1-223ENST00000582933 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-223ENST00000582933 USP35Q9P2H5 1018 aa8.09□□□□□ -1.11
PPP4R1-223ENST00000582933 NCAPD2Q15021 1401 aa8.09□□□□□ -1.11
PPP4R1-223ENST00000582933 MORC1Q86VD1 984 aa8.08□□□□□ -1.12
PPP4R1-223ENST00000582933 YTHDC1Q96MU7 727 aaKnown RBP8.08□□□□□ -1.12
PPP4R1-223ENST00000582933 CDCA7Q9BWT1 371 aaPredicted RBP8.08□□□□□ -1.12
PPP4R1-223ENST00000582933 NLRP2Q9NX02 1062 aa8.08□□□□□ -1.12
PPP4R1-223ENST00000582933 POLKQ9UBT6 870 aa8.08□□□□□ -1.12
PPP4R1-223ENST00000582933 NAP1L2Q9ULW6 460 aaPredicted RBP8.08□□□□□ -1.12
PPP4R1-223ENST00000582933 TNNT2P45379 298 aaPredicted RBP8.07□□□□□ -1.12
PPP4R1-223ENST00000582933 MKRN4PQ13434 485 aaPredicted RBP8.07□□□□□ -1.12
PPP4R1-223ENST00000582933 HSP90AB2PQ58FF8 381 aa8.07□□□□□ -1.12
PPP4R1-223ENST00000582933 KRT27Q7Z3Y8 459 aa8.07□□□□□ -1.12
PPP4R1-223ENST00000582933 IPO4Q8TEX9 1081 aaKnown RBP8.07□□□□□ -1.12
PPP4R1-223ENST00000582933 MEGF6O75095 1541 aa8.07□□□□□ -1.12
PPP4R1-223ENST00000582933 RGPD5Q99666 1765 aa8.07□□□□□ -1.12
PPP4R1-223ENST00000582933 OVOS2A0A0G2JMS6 1433 aa8.06□□□□□ -1.12
PPP4R1-223ENST00000582933 PPM1GO15355 546 aaPredicted RBP8.06□□□□□ -1.12
PPP4R1-223ENST00000582933 CC2D1BQ5T0F9 858 aaKnown RBP8.06□□□□□ -1.12
PPP4R1-223ENST00000582933 LTV1Q96GA3 475 aaPredicted RBP8.06□□□□□ -1.12
PPP4R1-223ENST00000582933 PLEKHG2Q9H7P9 1386 aa8.06□□□□□ -1.12
PPP4R1-223ENST00000582933 BRWD3Q6RI45 1802 aa8.06□□□□□ -1.12
PPP4R1-223ENST00000582933 BCL9O00512 1426 aa8.05□□□□□ -1.12
PPP4R1-223ENST00000582933 IL2RBP14784 551 aa8.05□□□□□ -1.12
PPP4R1-223ENST00000582933 TICAM2Q86XR7 235 aa8.05□□□□□ -1.12
PPP4R1-223ENST00000582933 TEX2Q8IWB9 1127 aa8.05□□□□□ -1.12
PPP4R1-223ENST00000582933 UPF1Q92900 1129 aaKnown RBP eCLIP8.05□□□□□ -1.12
PPP4R1-223ENST00000582933 COL3A1P02461 1466 aaPredicted RBP8.05□□□□□ -1.12
PPP4R1-223ENST00000582933 CHRM1P11229 460 aaPredicted RBP8.04□□□□□ -1.12
PPP4R1-223ENST00000582933 EIF4A2Q14240 407 aaKnown RBP8.04□□□□□ -1.12
PPP4R1-223ENST00000582933 DDB1Q16531 1140 aa8.04□□□□□ -1.12
PPP4R1-223ENST00000582933 NBPF6Q5VWK0 638 aa8.04□□□□□ -1.12
PPP4R1-223ENST00000582933 NBPF4Q96M43 638 aa8.04□□□□□ -1.12
PPP4R1-223ENST00000582933 PARD3Q8TEW0 1356 aa8.04□□□□□ -1.12
PPP4R1-223ENST00000582933 IGSF1Q8N6C5 1336 aa8.03□□□□□ -1.12
PPP4R1-223ENST00000582933 RGPD1P0DJD0 1748 aa8.03□□□□□ -1.12
PPP4R1-223ENST00000582933 PDE3BQ13370 1112 aa8.03□□□□□ -1.12
PPP4R1-223ENST00000582933 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.03□□□□□ -1.12
PPP4R1-223ENST00000582933 USHBP1Q8N6Y0 703 aa8.03□□□□□ -1.12
PPP4R1-223ENST00000582933 KDRP35968 1356 aa8.02□□□□□ -1.13
PPP4R1-223ENST00000582933 SPDYE4A6NLX3 237 aa8.02□□□□□ -1.13
PPP4R1-223ENST00000582933 NCLP19338 710 aaKnown RBP8.02□□□□□ -1.13
PPP4R1-223ENST00000582933 MTHFSP49914 203 aa8.02□□□□□ -1.13
PPP4R1-223ENST00000582933 POLA2Q14181 598 aa8.02□□□□□ -1.13
PPP4R1-223ENST00000582933 FAM182BQ5T319 152 aa8.02□□□□□ -1.13
PPP4R1-223ENST00000582933 FAM196AQ6ZSG2 479 aa8.02□□□□□ -1.13
PPP4R1-223ENST00000582933 RAPGEF4Q8WZA2 1011 aa8.02□□□□□ -1.13
PPP4R1-223ENST00000582933 PKD1L3Q7Z443 1732 aa8.02□□□□□ -1.13
PPP4R1-223ENST00000582933 TNS1Q9HBL0 1735 aaKnown RBP8.02□□□□□ -1.13
PPP4R1-223ENST00000582933 CCDC125Q86Z20 511 aa8.01□□□□□ -1.13
PPP4R1-223ENST00000582933 PROM2Q8N271 834 aa8.01□□□□□ -1.13
PPP4R1-223ENST00000582933 MARCH10Q8NA82 808 aaPredicted RBP8.01□□□□□ -1.13
PPP4R1-223ENST00000582933 EYA1Q99502 592 aa8.01□□□□□ -1.13
PPP4R1-223ENST00000582933 PCDH11XQ9BZA7 1347 aa8.01□□□□□ -1.13
PPP4R1-223ENST00000582933 PCDH11YQ9BZA8 1340 aa8.01□□□□□ -1.13
PPP4R1-223ENST00000582933 SHANK3Q9BYB0 1731 aa8□□□□□ -1.13
PPP4R1-223ENST00000582933 RGPD2P0DJD1 1756 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms