RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 USP17L4A6NCW7 530 aa6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 MOXD2PA6NHM9 499 aa6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 EXOC5O00471 708 aa6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 ABL1P00519 1130 aa6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 NEFMP07197 916 aa6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 XRCC5P13010 732 aaKnown RBP6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 SWI5Q1ZZU3 235 aa6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 USP17L2Q6R6M4 530 aa6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 USP17L1Q7RTZ2 530 aa6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 ILDR1Q86SU0 546 aaPredicted RBP6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 RNF135Q8IUD6 432 aa6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 FMNL3Q8IVF7 1028 aa6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 PLEKHM2Q8IWE5 1019 aa6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 RPUSD2Q8IZ73 545 aaKnown RBP6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 PXYLP1Q8TE99 480 aa6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 SCYL1Q96KG9 808 aa6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 SENP7Q9BQF6 1050 aa6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 HMX1Q9NP08 348 aaPredicted RBP6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 JADE2Q9NQC1 790 aa6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 MRPL42Q9Y6G3 142 aaKnown RBP6.6□□□□□ -1.35
TOPBP1-210ENST00000572787 ENPP3O14638 875 aa6.59□□□□□ -1.35
TOPBP1-210ENST00000572787 STK10O94804 968 aaKnown RBP6.59□□□□□ -1.35
TOPBP1-210ENST00000572787 FANCCQ00597 558 aa6.59□□□□□ -1.35
TOPBP1-210ENST00000572787 OS9Q13438 667 aaPredicted RBP6.59□□□□□ -1.35
TOPBP1-210ENST00000572787 C11orf96Q7Z7L8 435 aa6.59□□□□□ -1.35
TOPBP1-210ENST00000572787 FRMD6Q96NE9 622 aa6.59□□□□□ -1.35
TOPBP1-210ENST00000572787 ACBD3Q9H3P7 528 aa6.59□□□□□ -1.35
TOPBP1-210ENST00000572787 CDHR5Q9HBB8 845 aa6.59□□□□□ -1.35
TOPBP1-210ENST00000572787 PRR12Q9ULL5 1215 aa6.59□□□□□ -1.35
TOPBP1-210ENST00000572787 PRKAB1Q9Y478 270 aa6.59□□□□□ -1.35
TOPBP1-210ENST00000572787 PPP1R3GB7ZBB8 358 aa6.58□□□□□ -1.36
TOPBP1-210ENST00000572787 ANKRD13DQ6ZTN6 518 aa6.58□□□□□ -1.36
TOPBP1-210ENST00000572787 MRS2Q9HD23 443 aa6.58□□□□□ -1.36
TOPBP1-210ENST00000572787 TYW1Q9NV66 732 aaKnown RBP6.58□□□□□ -1.36
TOPBP1-210ENST00000572787 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-210ENST00000572787 PCDHB15Q9Y5E8 787 aa6.58□□□□□ -1.36
TOPBP1-210ENST00000572787 RPS6KL1Q9Y6S9 549 aa6.58□□□□□ -1.36
TOPBP1-210ENST00000572787 C21orf2O43822 256 aa6.57□□□□□ -1.36
TOPBP1-210ENST00000572787 HSP90AA1P07900 732 aaKnown RBP6.57□□□□□ -1.36
TOPBP1-210ENST00000572787 ZNF76P36508 570 aa6.57□□□□□ -1.36
TOPBP1-210ENST00000572787 PTK7Q13308 1070 aa6.57□□□□□ -1.36
TOPBP1-210ENST00000572787 CRTC2Q53ET0 693 aaPredicted RBP6.57□□□□□ -1.36
TOPBP1-210ENST00000572787 TSC1Q92574 1164 aa6.57□□□□□ -1.36
TOPBP1-210ENST00000572787 ZBTB3Q9H5J0 574 aa6.57□□□□□ -1.36
TOPBP1-210ENST00000572787 WWC3Q9ULE0 1092 aa6.57□□□□□ -1.36
TOPBP1-210ENST00000572787 PTMAP06454 111 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 PDGFRBP09619 1106 aa6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 EN1Q05925 392 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 ZNF211Q13398 564 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 AAMPQ13685 434 aa6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 CCSAPQ6IQ19 270 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 FAM43BQ6ZT52 329 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 VPS37DQ86XT2 251 aa6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 AMOTL1Q8IY63 956 aa6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 CABLES1Q8TDN4 633 aa6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 STAG1Q8WVM7 1258 aa6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 JDP2Q8WYK2 163 aa6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 RELTQ969Z4 430 aa6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 C8orf48Q96LL4 319 aa6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 CCDC85AQ96PX6 553 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 ZSWIM6Q9HCJ5 1215 aa6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 SWAP70Q9UH65 585 aa6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 TCEAL9Q9UHQ7 104 aa6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 ADGRG1Q9Y653 693 aa6.56□□□□□ -1.36
TOPBP1-210ENST00000572787 USP17L5A8MUK1 530 aa6.55□□□□□ -1.36
TOPBP1-210ENST00000572787 CCER2I3L3R5 266 aa6.55□□□□□ -1.36
TOPBP1-210ENST00000572787 KIF4AO95239 1232 aa6.55□□□□□ -1.36
TOPBP1-210ENST00000572787 P4HBP07237 508 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-210ENST00000572787 CD46P15529 392 aa6.55□□□□□ -1.36
TOPBP1-210ENST00000572787 RASA1P20936 1047 aa6.55□□□□□ -1.36
TOPBP1-210ENST00000572787 SCNN1AP37088 669 aa6.55□□□□□ -1.36
TOPBP1-210ENST00000572787 TNNI2P48788 182 aa6.55□□□□□ -1.36
TOPBP1-210ENST00000572787 CTDSPL2Q05D32 466 aa6.55□□□□□ -1.36
TOPBP1-210ENST00000572787 TAS1R3Q7RTX0 852 aa6.55□□□□□ -1.36
TOPBP1-210ENST00000572787 ANKMY2Q8IV38 441 aa6.55□□□□□ -1.36
TOPBP1-210ENST00000572787 PRPF38AQ8NAV1 312 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-210ENST00000572787 UPF1Q92900 1129 aaKnown RBP eCLIP6.55□□□□□ -1.36
TOPBP1-210ENST00000572787 MKRN1Q9UHC7 482 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-210ENST00000572787 INPP5FQ9Y2H2 1132 aa6.55□□□□□ -1.36
TOPBP1-210ENST00000572787 ATP5J2-PTCD1G3V325 749 aa6.54□□□□□ -1.36
TOPBP1-210ENST00000572787 MAP3K7O43318 606 aa6.54□□□□□ -1.36
TOPBP1-210ENST00000572787 SORBS3O60504 671 aa6.54□□□□□ -1.36
TOPBP1-210ENST00000572787 SKIP12755 728 aa6.54□□□□□ -1.36
TOPBP1-210ENST00000572787 NDUFV2P19404 249 aa6.54□□□□□ -1.36
TOPBP1-210ENST00000572787 GYS2P54840 703 aa6.54□□□□□ -1.36
TOPBP1-210ENST00000572787 UBE4AQ14139 1066 aa6.54□□□□□ -1.36
TOPBP1-210ENST00000572787 HELBQ8NG08 1087 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-210ENST00000572787 EPAS1Q99814 870 aa6.54□□□□□ -1.36
TOPBP1-210ENST00000572787 SLKQ9H2G2 1235 aaPredicted RBP6.54□□□□□ -1.36
TOPBP1-210ENST00000572787 QTRT2Q9H974 415 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-210ENST00000572787 ANO2Q9NQ90 1003 aa6.54□□□□□ -1.36
TOPBP1-210ENST00000572787 PLA2G2EQ9NZK7 142 aa6.54□□□□□ -1.36
TOPBP1-210ENST00000572787 CCDC189A1A4V9 331 aa6.53□□□□□ -1.36
TOPBP1-210ENST00000572787 EVI5O60447 810 aa6.53□□□□□ -1.36
TOPBP1-210ENST00000572787 PPP4CP60510 307 aa6.53□□□□□ -1.36
TOPBP1-210ENST00000572787 SF3B2Q13435 895 aaKnown RBP6.53□□□□□ -1.36
TOPBP1-210ENST00000572787 SAFB2Q14151 953 aaKnown RBP eCLIP6.53□□□□□ -1.36
TOPBP1-210ENST00000572787 MYBPC2Q14324 1141 aa6.53□□□□□ -1.36
TOPBP1-210ENST00000572787 PLEKHG4Q58EX7 1191 aa6.53□□□□□ -1.36
TOPBP1-210ENST00000572787 TMC4Q7Z404 712 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 204.6 ms