RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 PODNQ7Z5L7 613 aa11.09□□□□□ -0.63
CHD9-214ENST00000565119 GALNT6Q8NCL4 622 aa11.09□□□□□ -0.63
CHD9-214ENST00000565119 ZC3H4Q9UPT8 1303 aaKnown RBP11.09□□□□□ -0.63
CHD9-214ENST00000565119 ERVH48-1M5A8F1 160 aa11.08□□□□□ -0.64
CHD9-214ENST00000565119 PTK2Q05397 1052 aa11.08□□□□□ -0.64
CHD9-214ENST00000565119 POLR3EQ9NVU0 708 aa11.08□□□□□ -0.64
CHD9-214ENST00000565119 NBPF20Q3BBV1 942 aa11.07□□□□□ -0.64
CHD9-214ENST00000565119 GMCL1Q96IK5 515 aa11.07□□□□□ -0.64
CHD9-214ENST00000565119 K7ELQ4 463 aaPredicted RBP11.06□□□□□ -0.64
CHD9-214ENST00000565119 RNF144AP50876 292 aaPredicted RBP11.06□□□□□ -0.64
CHD9-214ENST00000565119 PDE4DQ08499 809 aa11.05□□□□□ -0.64
CHD9-214ENST00000565119 FOXR1Q6PIV2 292 aa11.05□□□□□ -0.64
CHD9-214ENST00000565119 GPSM3Q9Y4H4 160 aa11.05□□□□□ -0.64
CHD9-214ENST00000565119 RIPOR1Q6ZS17 1223 aa11.04□□□□□ -0.64
CHD9-214ENST00000565119 GTPBP3Q969Y2 492 aaKnown RBP11.04□□□□□ -0.64
CHD9-214ENST00000565119 FBXO31Q5XUX0 539 aaPredicted RBP11.03□□□□□ -0.64
CHD9-214ENST00000565119 Q8N3U1 123 aa11.02□□□□□ -0.65
CHD9-214ENST00000565119 KRBA1A5PL33 1030 aa11.01□□□□□ -0.65
CHD9-214ENST00000565119 ESPNB1AK53 854 aa11.01□□□□□ -0.65
CHD9-214ENST00000565119 BAG6P46379 1132 aa11.01□□□□□ -0.65
CHD9-214ENST00000565119 CYLDQ9NQC7 956 aa11.01□□□□□ -0.65
CHD9-214ENST00000565119 LRRC4BQ9NT99 713 aa11.01□□□□□ -0.65
CHD9-214ENST00000565119 SNRPNP63162 240 aaKnown RBP11□□□□□ -0.65
CHD9-214ENST00000565119 RSPH6AQ9H0K4 717 aa11□□□□□ -0.65
CHD9-214ENST00000565119 DZIP3Q86Y13 1208 aaKnown RBP10.99□□□□□ -0.65
CHD9-214ENST00000565119 DYRK1BQ9Y463 629 aa10.99□□□□□ -0.65
CHD9-214ENST00000565119 OIP5O43482 229 aa10.98□□□□□ -0.65
CHD9-214ENST00000565119 EPS8L1Q8TE68 723 aa10.98□□□□□ -0.65
CHD9-214ENST00000565119 H7C1W4 665 aa10.97□□□□□ -0.65
CHD9-214ENST00000565119 MX2P20592 715 aa10.97□□□□□ -0.65
CHD9-214ENST00000565119 TRERF1Q96PN7 1200 aa10.97□□□□□ -0.65
CHD9-214ENST00000565119 FURINP09958 794 aa10.96□□□□□ -0.65
CHD9-214ENST00000565119 POU4F2Q12837 409 aa10.96□□□□□ -0.65
CHD9-214ENST00000565119 GAS2L1Q99501 681 aaPredicted RBP10.96□□□□□ -0.65
CHD9-214ENST00000565119 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.95□□□□□ -0.66
CHD9-214ENST00000565119 MEN1O00255 615 aa10.95□□□□□ -0.66
CHD9-214ENST00000565119 GPC1P35052 558 aa10.95□□□□□ -0.66
CHD9-214ENST00000565119 PPP2R2DQ66LE6 453 aa10.95□□□□□ -0.66
CHD9-214ENST00000565119 ATP5J2-PTCD1G3V325 749 aa10.94□□□□□ -0.66
CHD9-214ENST00000565119 PSMG3-AS1Q96PY0 264 aa10.94□□□□□ -0.66
CHD9-214ENST00000565119 KRTAP9-2Q9BYQ4 174 aa10.94□□□□□ -0.66
CHD9-214ENST00000565119 COL8A1P27658 744 aa10.93□□□□□ -0.66
CHD9-214ENST00000565119 A0A1W2PRU2 124 aa10.92□□□□□ -0.66
CHD9-214ENST00000565119 SHISA8B8ZZ34 492 aa10.92□□□□□ -0.66
CHD9-214ENST00000565119 SEPT12Q8IYM1 358 aa10.92□□□□□ -0.66
CHD9-214ENST00000565119 OXCT2Q9BYC2 517 aaPredicted RBP10.92□□□□□ -0.66
CHD9-214ENST00000565119 NSFL1CQ9UNZ2 370 aaKnown RBP10.92□□□□□ -0.66
CHD9-214ENST00000565119 C1orf229Q6ZS94 237 aaPredicted RBP10.91□□□□□ -0.66
CHD9-214ENST00000565119 HMX1Q9NP08 348 aaPredicted RBP10.91□□□□□ -0.66
CHD9-214ENST00000565119 NBPF10Q6P3W6 841 aaKnown RBP10.9□□□□□ -0.66
CHD9-214ENST00000565119 NBPF15Q8N660 670 aa10.9□□□□□ -0.66
CHD9-214ENST00000565119 KRTAP9-6A0A140TA67 174 aa10.89□□□□□ -0.67
CHD9-214ENST00000565119 AP1G2O75843 785 aa10.89□□□□□ -0.67
CHD9-214ENST00000565119 PROCA1Q8NCQ7 364 aaPredicted RBP10.89□□□□□ -0.67
CHD9-214ENST00000565119 GRIP2Q9C0E4 1043 aa10.89□□□□□ -0.67
CHD9-214ENST00000565119 NUCKS1Q9H1E3 243 aaKnown RBP10.89□□□□□ -0.67
CHD9-214ENST00000565119 MKL2Q9ULH7 1088 aa10.89□□□□□ -0.67
CHD9-214ENST00000565119 THBS1P07996 1170 aa10.88□□□□□ -0.67
CHD9-214ENST00000565119 MAP2K3P46734 347 aa10.88□□□□□ -0.67
CHD9-214ENST00000565119 SLC27A3Q5K4L6 730 aa10.88□□□□□ -0.67
CHD9-214ENST00000565119 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.87□□□□□ -0.67
CHD9-214ENST00000565119 GIGYF1O75420 1035 aaPredicted RBP10.86□□□□□ -0.67
CHD9-214ENST00000565119 SKIV2LQ15477 1246 aaKnown RBP10.86□□□□□ -0.67
CHD9-214ENST00000565119 ALYREFQ86V81 257 aaKnown RBP10.86□□□□□ -0.67
CHD9-214ENST00000565119 PNMA1Q8ND90 353 aa10.86□□□□□ -0.67
CHD9-214ENST00000565119 SPATA31C2B4DYI2 1134 aa10.85□□□□□ -0.67
CHD9-214ENST00000565119 F11P03951 625 aa10.85□□□□□ -0.67
CHD9-214ENST00000565119 KLRG1Q96E93 195 aa10.85□□□□□ -0.67
CHD9-214ENST00000565119 NLRP3Q96P20 1036 aa10.85□□□□□ -0.67
CHD9-214ENST00000565119 TIMMDC1Q9NPL8 285 aa10.85□□□□□ -0.67
CHD9-214ENST00000565119 WDR44Q5JSH3 913 aa10.84□□□□□ -0.67
CHD9-214ENST00000565119 TRIM52Q96A61 297 aa10.84□□□□□ -0.67
CHD9-214ENST00000565119 CFHR5Q9BXR6 569 aa10.84□□□□□ -0.67
CHD9-214ENST00000565119 SUV39H2Q9H5I1 410 aa10.84□□□□□ -0.67
CHD9-214ENST00000565119 RRAGCQ9HB90 399 aa10.84□□□□□ -0.67
CHD9-214ENST00000565119 SLC24A3Q9HC58 644 aa10.84□□□□□ -0.67
CHD9-214ENST00000565119 HOXB4P17483 251 aaPredicted RBP10.83□□□□□ -0.68
CHD9-214ENST00000565119 ERVK-9P63128 1117 aa10.83□□□□□ -0.68
CHD9-214ENST00000565119 CLN3Q13286 438 aa10.83□□□□□ -0.68
CHD9-214ENST00000565119 GRIN2CQ14957 1233 aa10.82□□□□□ -0.68
CHD9-214ENST00000565119 LINC00114Q6XXX2 140 aa10.82□□□□□ -0.68
CHD9-214ENST00000565119 EDARADDQ8WWZ3 215 aa10.82□□□□□ -0.68
CHD9-214ENST00000565119 USP17L8P0C7I0 530 aa10.81□□□□□ -0.68
CHD9-214ENST00000565119 ITGB7P26010 798 aa10.81□□□□□ -0.68
CHD9-214ENST00000565119 SH3D19Q5HYK7 790 aa10.81□□□□□ -0.68
CHD9-214ENST00000565119 CC2D2BQ6DHV5 1058 aa10.81□□□□□ -0.68
CHD9-214ENST00000565119 C1QTNF9BB2RNN3 333 aa10.8□□□□□ -0.68
CHD9-214ENST00000565119 WASLO00401 505 aaPredicted RBP10.8□□□□□ -0.68
CHD9-214ENST00000565119 TAS1R3Q7RTX0 852 aa10.8□□□□□ -0.68
CHD9-214ENST00000565119 GDF2Q9UK05 429 aaPredicted RBP10.8□□□□□ -0.68
CHD9-214ENST00000565119 SCTRP47872 440 aa10.79□□□□□ -0.68
CHD9-214ENST00000565119 UBAP2LQ14157 1087 aaKnown RBP10.78□□□□□ -0.68
CHD9-214ENST00000565119 CD163Q86VB7 1156 aa10.78□□□□□ -0.68
CHD9-214ENST00000565119 GPAMQ9HCL2 828 aa10.78□□□□□ -0.68
CHD9-214ENST00000565119 PCDHB9Q9Y5E1 797 aa10.78□□□□□ -0.68
CHD9-214ENST00000565119 TRIM34Q9BYJ4 488 aa10.77□□□□□ -0.69
CHD9-214ENST00000565119 ARHGEF10LQ9HCE6 1279 aa10.77□□□□□ -0.69
CHD9-214ENST00000565119 CYP2U1Q7Z449 544 aa10.76□□□□□ -0.69
CHD9-214ENST00000565119 GOLGA6L1Q8N7Z2 621 aa10.76□□□□□ -0.69
CHD9-214ENST00000565119 ATP1B4Q9UN42 357 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms