RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 PODNQ7Z5L7 613 aa8.15□□□□□ -1.1
DENND4A-205ENST00000562540 PNMA1Q8ND90 353 aa8.15□□□□□ -1.1
DENND4A-205ENST00000562540 ADAM32Q8TC27 787 aa8.15□□□□□ -1.1
DENND4A-205ENST00000562540 ZNF837Q96EG3 531 aaPredicted RBP8.15□□□□□ -1.1
DENND4A-205ENST00000562540 OCSTAMPQ9BR26 566 aa8.15□□□□□ -1.1
DENND4A-205ENST00000562540 GPSM3Q9Y4H4 160 aa8.15□□□□□ -1.1
DENND4A-205ENST00000562540 GPR25O00155 361 aa8.14□□□□□ -1.11
DENND4A-205ENST00000562540 BCRP11274 1271 aa8.14□□□□□ -1.11
DENND4A-205ENST00000562540 RAB15P59190 212 aa8.14□□□□□ -1.11
DENND4A-205ENST00000562540 PPP2R2DQ66LE6 453 aa8.14□□□□□ -1.11
DENND4A-205ENST00000562540 NEDD1Q8NHV4 660 aa8.14□□□□□ -1.11
DENND4A-205ENST00000562540 DDRGK1Q96HY6 314 aa8.14□□□□□ -1.11
DENND4A-205ENST00000562540 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.14□□□□□ -1.11
DENND4A-205ENST00000562540 ACDQ96AP0 544 aa8.13□□□□□ -1.11
DENND4A-205ENST00000562540 KDM4CQ9H3R0 1056 aa8.13□□□□□ -1.11
DENND4A-205ENST00000562540 GPBP1L1Q9HC44 474 aaPredicted RBP8.13□□□□□ -1.11
DENND4A-205ENST00000562540 TMPRSS4Q9NRS4 437 aa8.13□□□□□ -1.11
DENND4A-205ENST00000562540 BAG6P46379 1132 aa8.12□□□□□ -1.11
DENND4A-205ENST00000562540 KDF1Q8NAX2 398 aaPredicted RBP8.12□□□□□ -1.11
DENND4A-205ENST00000562540 ZNF784Q8NCA9 323 aaPredicted RBP8.12□□□□□ -1.11
DENND4A-205ENST00000562540 USP17L8P0C7I0 530 aa8.11□□□□□ -1.11
DENND4A-205ENST00000562540 LYSMD3Q7Z3D4 306 aa8.11□□□□□ -1.11
DENND4A-205ENST00000562540 DZIP3Q86Y13 1208 aaKnown RBP8.11□□□□□ -1.11
DENND4A-205ENST00000562540 FAM117AQ9C073 453 aa8.11□□□□□ -1.11
DENND4A-205ENST00000562540 KRBA1A5PL33 1030 aa8.1□□□□□ -1.11
DENND4A-205ENST00000562540 ADH1AP07327 375 aa8.1□□□□□ -1.11
DENND4A-205ENST00000562540 EPS8L1Q8TE68 723 aa8.1□□□□□ -1.11
DENND4A-205ENST00000562540 HMX1Q9NP08 348 aaPredicted RBP8.1□□□□□ -1.11
DENND4A-205ENST00000562540 FURINP09958 794 aa8.09□□□□□ -1.11
DENND4A-205ENST00000562540 RHOQP17081 205 aa8.09□□□□□ -1.11
DENND4A-205ENST00000562540 ADD1P35611 737 aaKnown RBP8.09□□□□□ -1.11
DENND4A-205ENST00000562540 TRIM22Q8IYM9 498 aa8.09□□□□□ -1.11
DENND4A-205ENST00000562540 ERVH48-1M5A8F1 160 aa8.08□□□□□ -1.12
DENND4A-205ENST00000562540 DBN1Q16643 649 aa8.08□□□□□ -1.12
DENND4A-205ENST00000562540 LILRA1O75019 489 aa8.07□□□□□ -1.12
DENND4A-205ENST00000562540 PTGIRP43119 386 aa8.07□□□□□ -1.12
DENND4A-205ENST00000562540 SNRPNP63162 240 aaKnown RBP8.07□□□□□ -1.12
DENND4A-205ENST00000562540 PRICKLE2Q7Z3G6 844 aa8.07□□□□□ -1.12
DENND4A-205ENST00000562540 GMCL1Q96IK5 515 aa8.06□□□□□ -1.12
DENND4A-205ENST00000562540 ESPNB1AK53 854 aa8.05□□□□□ -1.12
DENND4A-205ENST00000562540 RFC5P40937 340 aa8.05□□□□□ -1.12
DENND4A-205ENST00000562540 KRTAP1-3Q8IUG1 177 aa8.05□□□□□ -1.12
DENND4A-205ENST00000562540 GTPBP3Q969Y2 492 aaKnown RBP8.05□□□□□ -1.12
DENND4A-205ENST00000562540 CYLDQ9NQC7 956 aa8.05□□□□□ -1.12
DENND4A-205ENST00000562540 OIP5O43482 229 aa8.04□□□□□ -1.12
DENND4A-205ENST00000562540 COL8A1P27658 744 aa8.04□□□□□ -1.12
DENND4A-205ENST00000562540 FOXR1Q6PIV2 292 aa8.04□□□□□ -1.12
DENND4A-205ENST00000562540 RIPOR1Q6ZS17 1223 aa8.04□□□□□ -1.12
DENND4A-205ENST00000562540 TRIM52Q96A61 297 aa8.04□□□□□ -1.12
DENND4A-205ENST00000562540 LRRC4BQ9NT99 713 aa8.04□□□□□ -1.12
DENND4A-205ENST00000562540 RNF144AP50876 292 aaPredicted RBP8.03□□□□□ -1.12
DENND4A-205ENST00000562540 SEPT12Q8IYM1 358 aa8.03□□□□□ -1.12
DENND4A-205ENST00000562540 SHISA8B8ZZ34 492 aa8.01□□□□□ -1.13
DENND4A-205ENST00000562540 MX2P20592 715 aa8.01□□□□□ -1.13
DENND4A-205ENST00000562540 TRIM34Q9BYJ4 488 aa8.01□□□□□ -1.13
DENND4A-205ENST00000562540 ITGB7P26010 798 aa8□□□□□ -1.13
DENND4A-205ENST00000562540 PCDHB9Q9Y5E1 797 aa8□□□□□ -1.13
DENND4A-205ENST00000562540 ZBBXA8MT70 800 aa7.99□□□□□ -1.13
DENND4A-205ENST00000562540 ATP5J2-PTCD1G3V325 749 aa7.99□□□□□ -1.13
DENND4A-205ENST00000562540 C1orf229Q6ZS94 237 aaPredicted RBP7.99□□□□□ -1.13
DENND4A-205ENST00000562540 PCMTD1Q96MG8 357 aaPredicted RBP7.99□□□□□ -1.13
DENND4A-205ENST00000562540 TRERF1Q96PN7 1200 aa7.99□□□□□ -1.13
DENND4A-205ENST00000562540 GAS2L1Q99501 681 aaPredicted RBP7.99□□□□□ -1.13
DENND4A-205ENST00000562540 OXCT2Q9BYC2 517 aaPredicted RBP7.99□□□□□ -1.13
DENND4A-205ENST00000562540 DYRK1BQ9Y463 629 aa7.99□□□□□ -1.13
DENND4A-205ENST00000562540 MEN1O00255 615 aa7.98□□□□□ -1.13
DENND4A-205ENST00000562540 GIGYF1O75420 1035 aaPredicted RBP7.98□□□□□ -1.13
DENND4A-205ENST00000562540 MKL2Q9ULH7 1088 aa7.98□□□□□ -1.13
DENND4A-205ENST00000562540 H7C1W4 665 aa7.97□□□□□ -1.13
DENND4A-205ENST00000562540 TMEM259Q4ZIN3 620 aa7.97□□□□□ -1.13
DENND4A-205ENST00000562540 FBXO45P0C2W1 286 aa7.96□□□□□ -1.14
DENND4A-205ENST00000562540 POU4F2Q12837 409 aa7.96□□□□□ -1.14
DENND4A-205ENST00000562540 ALYREFQ86V81 257 aaKnown RBP7.96□□□□□ -1.14
DENND4A-205ENST00000562540 SUV39H2Q9H5I1 410 aa7.96□□□□□ -1.14
DENND4A-205ENST00000562540 NSFL1CQ9UNZ2 370 aaKnown RBP7.96□□□□□ -1.14
DENND4A-205ENST00000562540 GPC1P35052 558 aa7.95□□□□□ -1.14
DENND4A-205ENST00000562540 GRIN2CQ14957 1233 aa7.95□□□□□ -1.14
DENND4A-205ENST00000562540 GOPCQ9HD26 462 aa7.95□□□□□ -1.14
DENND4A-205ENST00000562540 A0A1W2PRU2 124 aa7.94□□□□□ -1.14
DENND4A-205ENST00000562540 THBS1P07996 1170 aa7.94□□□□□ -1.14
DENND4A-205ENST00000562540 MAP2K3P46734 347 aa7.94□□□□□ -1.14
DENND4A-205ENST00000562540 SLC27A3Q5K4L6 730 aa7.94□□□□□ -1.14
DENND4A-205ENST00000562540 RNF20Q5VTR2 975 aa7.94□□□□□ -1.14
DENND4A-205ENST00000562540 CC2D2BQ6DHV5 1058 aa7.94□□□□□ -1.14
DENND4A-205ENST00000562540 CCDC125Q86Z20 511 aa7.94□□□□□ -1.14
DENND4A-205ENST00000562540 NLRP3Q96P20 1036 aa7.94□□□□□ -1.14
DENND4A-205ENST00000562540 RRAGCQ9HB90 399 aa7.94□□□□□ -1.14
DENND4A-205ENST00000562540 C1QTNF9BB2RNN3 333 aa7.93□□□□□ -1.14
DENND4A-205ENST00000562540 HOXB4P17483 251 aaPredicted RBP7.93□□□□□ -1.14
DENND4A-205ENST00000562540 ERVK-9P63128 1117 aa7.93□□□□□ -1.14
DENND4A-205ENST00000562540 CYP2U1Q7Z449 544 aa7.93□□□□□ -1.14
DENND4A-205ENST00000562540 GJD4Q96KN9 370 aaPredicted RBP7.93□□□□□ -1.14
DENND4A-205ENST00000562540 NUCKS1Q9H1E3 243 aaKnown RBP7.93□□□□□ -1.14
DENND4A-205ENST00000562540 LCE3BQ5TA77 95 aa7.92□□□□□ -1.14
DENND4A-205ENST00000562540 LINC00114Q6XXX2 140 aa7.92□□□□□ -1.14
DENND4A-205ENST00000562540 CD163Q86VB7 1156 aa7.92□□□□□ -1.14
DENND4A-205ENST00000562540 KLRG1Q96E93 195 aa7.92□□□□□ -1.14
DENND4A-205ENST00000562540 BCANQ96GW7 911 aa7.92□□□□□ -1.14
DENND4A-205ENST00000562540 KRTAP4-12Q9BQ66 201 aa7.92□□□□□ -1.14
DENND4A-205ENST00000562540 NBPF10Q6P3W6 841 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms