RNA–Protein interactions for RNA: ENST00000562428.6

NAE1-207, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 5

Gene NAE1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-207ENST00000562428 TRIM22Q8IYM9 498 aa11.42□□□□□ -0.58
NAE1-207ENST00000562428 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.41□□□□□ -0.58
NAE1-207ENST00000562428 ERVH48-1M5A8F1 160 aa11.41□□□□□ -0.58
NAE1-207ENST00000562428 NR6A1Q15406 480 aa11.41□□□□□ -0.58
NAE1-207ENST00000562428 ADAM32Q8TC27 787 aa11.41□□□□□ -0.58
NAE1-207ENST00000562428 K7ELQ4 463 aaPredicted RBP11.4□□□□□ -0.58
NAE1-207ENST00000562428 RAB15P59190 212 aa11.4□□□□□ -0.58
NAE1-207ENST00000562428 NEDD1Q8NHV4 660 aa11.4□□□□□ -0.58
NAE1-207ENST00000562428 GALNT6Q8NCL4 622 aa11.39□□□□□ -0.59
NAE1-207ENST00000562428 KRTAP9-2Q9BYQ4 174 aa11.39□□□□□ -0.59
NAE1-207ENST00000562428 RNF144AP50876 292 aaPredicted RBP11.38□□□□□ -0.59
NAE1-207ENST00000562428 Q8N3U1 123 aa11.38□□□□□ -0.59
NAE1-207ENST00000562428 POLR3EQ9NVU0 708 aa11.38□□□□□ -0.59
NAE1-207ENST00000562428 ZC3H4Q9UPT8 1303 aaKnown RBP11.37□□□□□ -0.59
NAE1-207ENST00000562428 KRBA1A5PL33 1030 aa11.37□□□□□ -0.59
NAE1-207ENST00000562428 PODNQ7Z5L7 613 aa11.37□□□□□ -0.59
NAE1-207ENST00000562428 GTPBP3Q969Y2 492 aaKnown RBP11.37□□□□□ -0.59
NAE1-207ENST00000562428 BAG6P46379 1132 aa11.36□□□□□ -0.59
NAE1-207ENST00000562428 SNRPNP63162 240 aaKnown RBP11.36□□□□□ -0.59
NAE1-207ENST00000562428 GMCL1Q96IK5 515 aa11.36□□□□□ -0.59
NAE1-207ENST00000562428 ESPNB1AK53 854 aa11.35□□□□□ -0.59
NAE1-207ENST00000562428 PTK2Q05397 1052 aa11.35□□□□□ -0.59
NAE1-207ENST00000562428 KRTAP9-6A0A140TA67 174 aa11.34□□□□□ -0.59
NAE1-207ENST00000562428 RIPOR1Q6ZS17 1223 aa11.34□□□□□ -0.59
NAE1-207ENST00000562428 GPSM3Q9Y4H4 160 aa11.34□□□□□ -0.59
NAE1-207ENST00000562428 NBPF20Q3BBV1 942 aa11.33□□□□□ -0.6
NAE1-207ENST00000562428 EPS8L1Q8TE68 723 aa11.33□□□□□ -0.6
NAE1-207ENST00000562428 PSMG3-AS1Q96PY0 264 aa11.33□□□□□ -0.6
NAE1-207ENST00000562428 CYLDQ9NQC7 956 aa11.32□□□□□ -0.6
NAE1-207ENST00000562428 LRRC4BQ9NT99 713 aa11.32□□□□□ -0.6
NAE1-207ENST00000562428 OIP5O43482 229 aa11.31□□□□□ -0.6
NAE1-207ENST00000562428 FURINP09958 794 aa11.31□□□□□ -0.6
NAE1-207ENST00000562428 COL8A1P27658 744 aa11.31□□□□□ -0.6
NAE1-207ENST00000562428 FOXR1Q6PIV2 292 aa11.3□□□□□ -0.6
NAE1-207ENST00000562428 DYRK1BQ9Y463 629 aa11.3□□□□□ -0.6
NAE1-207ENST00000562428 C1orf229Q6ZS94 237 aaPredicted RBP11.29□□□□□ -0.6
NAE1-207ENST00000562428 SHISA8B8ZZ34 492 aa11.28□□□□□ -0.6
NAE1-207ENST00000562428 THBS1P07996 1170 aa11.27□□□□□ -0.61
NAE1-207ENST00000562428 MX2P20592 715 aa11.27□□□□□ -0.61
NAE1-207ENST00000562428 POU4F2Q12837 409 aa11.27□□□□□ -0.61
NAE1-207ENST00000562428 GAS2L1Q99501 681 aaPredicted RBP11.27□□□□□ -0.61
NAE1-207ENST00000562428 RSPH6AQ9H0K4 717 aa11.27□□□□□ -0.61
NAE1-207ENST00000562428 DZIP3Q86Y13 1208 aaKnown RBP11.26□□□□□ -0.61
NAE1-207ENST00000562428 KDM4CQ9H3R0 1056 aa11.26□□□□□ -0.61
NAE1-207ENST00000562428 GPC1P35052 558 aa11.25□□□□□ -0.61
NAE1-207ENST00000562428 PPP2R2DQ66LE6 453 aa11.25□□□□□ -0.61
NAE1-207ENST00000562428 GPBP1L1Q9HC44 474 aaPredicted RBP11.25□□□□□ -0.61
NAE1-207ENST00000562428 A0A1W2PRU2 124 aa11.24□□□□□ -0.61
NAE1-207ENST00000562428 H7C1W4 665 aa11.24□□□□□ -0.61
NAE1-207ENST00000562428 MEN1O00255 615 aa11.24□□□□□ -0.61
NAE1-207ENST00000562428 TRERF1Q96PN7 1200 aa11.24□□□□□ -0.61
NAE1-207ENST00000562428 OXCT2Q9BYC2 517 aaPredicted RBP11.24□□□□□ -0.61
NAE1-207ENST00000562428 HMX1Q9NP08 348 aaPredicted RBP11.24□□□□□ -0.61
NAE1-207ENST00000562428 ATP5J2-PTCD1G3V325 749 aa11.23□□□□□ -0.61
NAE1-207ENST00000562428 HOXB4P17483 251 aaPredicted RBP11.23□□□□□ -0.61
NAE1-207ENST00000562428 ITGB7P26010 798 aa11.23□□□□□ -0.61
NAE1-207ENST00000562428 DDRGK1Q96HY6 314 aa11.22□□□□□ -0.61
NAE1-207ENST00000562428 GRIP2Q9C0E4 1043 aa11.22□□□□□ -0.61
NAE1-207ENST00000562428 NBPF10Q6P3W6 841 aaKnown RBP11.21□□□□□ -0.61
NAE1-207ENST00000562428 NBPF15Q8N660 670 aa11.21□□□□□ -0.61
NAE1-207ENST00000562428 PROCA1Q8NCQ7 364 aaPredicted RBP11.21□□□□□ -0.61
NAE1-207ENST00000562428 SUV39H2Q9H5I1 410 aa11.2□□□□□ -0.62
NAE1-207ENST00000562428 SEPT12Q8IYM1 358 aa11.19□□□□□ -0.62
NAE1-207ENST00000562428 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.19□□□□□ -0.62
NAE1-207ENST00000562428 FAM117AQ9C073 453 aa11.19□□□□□ -0.62
NAE1-207ENST00000562428 NUCKS1Q9H1E3 243 aaKnown RBP11.19□□□□□ -0.62
NAE1-207ENST00000562428 MKL2Q9ULH7 1088 aa11.19□□□□□ -0.62
NAE1-207ENST00000562428 LINC00114Q6XXX2 140 aa11.18□□□□□ -0.62
NAE1-207ENST00000562428 KLRG1Q96E93 195 aa11.18□□□□□ -0.62
NAE1-207ENST00000562428 NSFL1CQ9UNZ2 370 aaKnown RBP11.18□□□□□ -0.62
NAE1-207ENST00000562428 SPATA31C2B4DYI2 1134 aa11.17□□□□□ -0.62
NAE1-207ENST00000562428 GIGYF1O75420 1035 aaPredicted RBP11.17□□□□□ -0.62
NAE1-207ENST00000562428 MAP2K3P46734 347 aa11.17□□□□□ -0.62
NAE1-207ENST00000562428 AP1G2O75843 785 aa11.16□□□□□ -0.62
NAE1-207ENST00000562428 TPRNQ4KMQ1 711 aa11.16□□□□□ -0.62
NAE1-207ENST00000562428 F11P03951 625 aa11.15□□□□□ -0.62
NAE1-207ENST00000562428 ERVK-9P63128 1117 aa11.15□□□□□ -0.62
NAE1-207ENST00000562428 UBAP2LQ14157 1087 aaKnown RBP11.15□□□□□ -0.62
NAE1-207ENST00000562428 SKIV2LQ15477 1246 aaKnown RBP11.15□□□□□ -0.62
NAE1-207ENST00000562428 SH3D19Q5HYK7 790 aa11.15□□□□□ -0.62
NAE1-207ENST00000562428 SLC27A3Q5K4L6 730 aa11.15□□□□□ -0.62
NAE1-207ENST00000562428 ALYREFQ86V81 257 aaKnown RBP11.15□□□□□ -0.62
NAE1-207ENST00000562428 CFHR5Q9BXR6 569 aa11.15□□□□□ -0.62
NAE1-207ENST00000562428 C1QTNF9BB2RNN3 333 aa11.14□□□□□ -0.63
NAE1-207ENST00000562428 KRTAP1-3Q8IUG1 177 aa11.14□□□□□ -0.63
NAE1-207ENST00000562428 EDARADDQ8WWZ3 215 aa11.14□□□□□ -0.63
NAE1-207ENST00000562428 TIMMDC1Q9NPL8 285 aa11.14□□□□□ -0.63
NAE1-207ENST00000562428 GRIN2CQ14957 1233 aa11.13□□□□□ -0.63
NAE1-207ENST00000562428 NEUROD2Q15784 382 aa11.13□□□□□ -0.63
NAE1-207ENST00000562428 WDR44Q5JSH3 913 aa11.13□□□□□ -0.63
NAE1-207ENST00000562428 SCTRP47872 440 aa11.12□□□□□ -0.63
NAE1-207ENST00000562428 CLN3Q13286 438 aa11.12□□□□□ -0.63
NAE1-207ENST00000562428 CD163Q86VB7 1156 aa11.12□□□□□ -0.63
NAE1-207ENST00000562428 RRAGCQ9HB90 399 aa11.12□□□□□ -0.63
NAE1-207ENST00000562428 WASLO00401 505 aaPredicted RBP11.11□□□□□ -0.63
NAE1-207ENST00000562428 C2CD2LO14523 706 aa11.11□□□□□ -0.63
NAE1-207ENST00000562428 CC2D2BQ6DHV5 1058 aa11.11□□□□□ -0.63
NAE1-207ENST00000562428 NLRP3Q96P20 1036 aa11.11□□□□□ -0.63
NAE1-207ENST00000562428 USP17L8P0C7I0 530 aa11.1□□□□□ -0.63
NAE1-207ENST00000562428 CHRNA4P43681 627 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms