RNA–Protein interactions for RNA: ENST00000562428.6

NAE1-207, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 5

Gene NAE1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-207ENST00000562428 AEBP2Q6ZN18 517 aaPredicted RBP36.81■■■■□ 3.48
NAE1-207ENST00000562428 CHIC1Q5VXU3 224 aa34.36■■■■□ 3.09
NAE1-207ENST00000562428 SENP3Q9H4L4 574 aaPredicted RBP31.27■■■□□ 2.6
NAE1-207ENST00000562428 PHF23Q9BUL5 403 aaPredicted RBP30.88■■■□□ 2.53
NAE1-207ENST00000562428 FOXD1Q16676 465 aa29.33■■■□□ 2.29
NAE1-207ENST00000562428 POTEDQ86YR6 584 aa27.79■■■□□ 2.04
NAE1-207ENST00000562428 MSH5O43196 834 aa27.48■■□□□ 1.99
NAE1-207ENST00000562428 PIAS4Q8N2W9 510 aaPredicted RBP27.2■■□□□ 1.94
NAE1-207ENST00000562428 PLPPR3Q6T4P5 718 aa27.14■■□□□ 1.94
NAE1-207ENST00000562428 PPP6R1Q9UPN7 881 aa27.13■■□□□ 1.93
NAE1-207ENST00000562428 ADRA2BP18089 450 aa26.96■■□□□ 1.91
NAE1-207ENST00000562428 MAPK8IP2Q13387 824 aaPredicted RBP24.95■■□□□ 1.58
NAE1-207ENST00000562428 DMRT2Q9Y5R5 561 aa24.78■■□□□ 1.56
NAE1-207ENST00000562428 SCAF1Q9H7N4 1312 aaKnown RBP24.44■■□□□ 1.5
NAE1-207ENST00000562428 CACNB1Q02641 598 aaPredicted RBP23.91■■□□□ 1.42
NAE1-207ENST00000562428 PPP4R3CPQ6ZMV5 832 aa23.8■■□□□ 1.4
NAE1-207ENST00000562428 DCAF8L1A6NGE4 600 aa23.71■■□□□ 1.39
NAE1-207ENST00000562428 HOXD11P31277 338 aaPredicted RBP23.69■■□□□ 1.38
NAE1-207ENST00000562428 RNF39Q9H2S5 420 aa23.51■■□□□ 1.35
NAE1-207ENST00000562428 CNKSR2Q8WXI2 1034 aa23.41■■□□□ 1.34
NAE1-207ENST00000562428 RNF216Q9NWF9 866 aaPredicted RBP23.34■■□□□ 1.33
NAE1-207ENST00000562428 C1QBPQ07021 282 aaKnown RBP23.05■■□□□ 1.28
NAE1-207ENST00000562428 DNAJC5BQ9UF47 199 aa22.89■■□□□ 1.25
NAE1-207ENST00000562428 NCBP3Q53F19 620 aaKnown RBP22.59■■□□□ 1.21
NAE1-207ENST00000562428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.48■■□□□ 1.19
NAE1-207ENST00000562428 NPM3O75607 178 aaKnown RBP22.43■■□□□ 1.18
NAE1-207ENST00000562428 U3KPZ7 1027 aaPredicted RBP22.08■■□□□ 1.13
NAE1-207ENST00000562428 SPINK5Q9NQ38 1064 aaPredicted RBP21.92■■□□□ 1.1
NAE1-207ENST00000562428 DSG3P32926 999 aa21.86■■□□□ 1.09
NAE1-207ENST00000562428 CAPN15O75808 1086 aa21.78■■□□□ 1.08
NAE1-207ENST00000562428 POTEHQ6S545 545 aa21.64■■□□□ 1.05
NAE1-207ENST00000562428 SLC4A2P04920 1241 aa21.62■■□□□ 1.05
NAE1-207ENST00000562428 KCNA4P22459 653 aa21.61■■□□□ 1.05
NAE1-207ENST00000562428 TRHP20396 242 aaPredicted RBP21.35■■□□□ 1.01
NAE1-207ENST00000562428 ABCB7O75027 752 aa21.32■■□□□ 1
NAE1-207ENST00000562428 ZNF219Q9P2Y4 722 aaPredicted RBP21.21■□□□□ 0.99
NAE1-207ENST00000562428 APLP2Q06481 763 aa21.14■□□□□ 0.97
NAE1-207ENST00000562428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.06■□□□□ 0.96
NAE1-207ENST00000562428 HNRNPUL2Q1KMD3 747 aaKnown RBP21.06■□□□□ 0.96
NAE1-207ENST00000562428 SAMD1Q6SPF0 538 aaPredicted RBP20.97■□□□□ 0.95
NAE1-207ENST00000562428 RBM42Q9BTD8 480 aaKnown RBP20.71■□□□□ 0.91
NAE1-207ENST00000562428 POLA2Q14181 598 aa20.68■□□□□ 0.9
NAE1-207ENST00000562428 MYCNP04198 464 aaPredicted RBP20.67■□□□□ 0.9
NAE1-207ENST00000562428 CHRDL2Q6WN34 429 aa20.56■□□□□ 0.88
NAE1-207ENST00000562428 ATF5Q9Y2D1 282 aaPredicted RBP20.41■□□□□ 0.86
NAE1-207ENST00000562428 FOXD4L1Q9NU39 408 aa20.22■□□□□ 0.83
NAE1-207ENST00000562428 AKT1S1Q96B36 256 aa20.2■□□□□ 0.82
NAE1-207ENST00000562428 SLC4A1APQ9BWU0 796 aaKnown RBP20.2■□□□□ 0.82
NAE1-207ENST00000562428 REM2Q8IYK8 340 aaPredicted RBP20.08■□□□□ 0.81
NAE1-207ENST00000562428 OSCARQ8IYS5 282 aa20.07■□□□□ 0.8
NAE1-207ENST00000562428 ZBTB12Q9Y330 459 aaPredicted RBP20.07■□□□□ 0.8
NAE1-207ENST00000562428 SP7Q8TDD2 431 aaPredicted RBP20.04■□□□□ 0.8
NAE1-207ENST00000562428 PIP4P2Q8N4L2 257 aa20.01■□□□□ 0.79
NAE1-207ENST00000562428 ZBTB22O15209 634 aa19.93■□□□□ 0.78
NAE1-207ENST00000562428 PITPNM1O00562 1244 aa19.88■□□□□ 0.77
NAE1-207ENST00000562428 FXR2P51116 673 aaKnown RBP eCLIP19.81■□□□□ 0.76
NAE1-207ENST00000562428 HAX1O00165 279 aa19.7■□□□□ 0.74
NAE1-207ENST00000562428 EVX2Q03828 476 aa19.61■□□□□ 0.73
NAE1-207ENST00000562428 ATXN8OSP0DMR3 200 aa19.6■□□□□ 0.73
NAE1-207ENST00000562428 SPDYE2BA6NHP3 402 aa19.5■□□□□ 0.71
NAE1-207ENST00000562428 SPDYE6P0CI01 402 aa19.5■□□□□ 0.71
NAE1-207ENST00000562428 SPDYE2Q495Y8 402 aa19.5■□□□□ 0.71
NAE1-207ENST00000562428 MKRN4PQ13434 485 aaPredicted RBP19.43■□□□□ 0.7
NAE1-207ENST00000562428 FBLN2P98095 1184 aa19.4■□□□□ 0.7
NAE1-207ENST00000562428 PRKAR2AP13861 404 aaKnown RBP19.32■□□□□ 0.68
NAE1-207ENST00000562428 CLEC11AQ9Y240 323 aa19.28■□□□□ 0.68
NAE1-207ENST00000562428 SSUH2Q9Y2M2 353 aa19.27■□□□□ 0.68
NAE1-207ENST00000562428 SPDYE1Q8NFV5 336 aaPredicted RBP19.26■□□□□ 0.67
NAE1-207ENST00000562428 C19orf67A6NJJ6 358 aa19.19■□□□□ 0.66
NAE1-207ENST00000562428 ZNF692Q9BU19 519 aaPredicted RBP19.19■□□□□ 0.66
NAE1-207ENST00000562428 CHADLQ6NUI6 762 aa19.07■□□□□ 0.64
NAE1-207ENST00000562428 GABBR2O75899 941 aa19.03■□□□□ 0.64
NAE1-207ENST00000562428 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.62
NAE1-207ENST00000562428 PRR29P0C7W0 189 aa18.87■□□□□ 0.61
NAE1-207ENST00000562428 LHX8Q68G74 356 aa18.79■□□□□ 0.6
NAE1-207ENST00000562428 POTEIP0CG38 1075 aa18.72■□□□□ 0.59
NAE1-207ENST00000562428 FARP1Q9Y4F1 1045 aaPredicted RBP18.68■□□□□ 0.58
NAE1-207ENST00000562428 CD44P16070 742 aaKnown RBP18.66■□□□□ 0.58
NAE1-207ENST00000562428 CSRNP3Q8WYN3 585 aa18.51■□□□□ 0.55
NAE1-207ENST00000562428 CREBZFQ9NS37 354 aa18.41■□□□□ 0.54
NAE1-207ENST00000562428 CLCN6P51797 869 aa18.37■□□□□ 0.53
NAE1-207ENST00000562428 ZNF579Q8NAF0 562 aaKnown RBP18.37■□□□□ 0.53
NAE1-207ENST00000562428 ZRANB1Q9UGI0 708 aa18.32■□□□□ 0.52
NAE1-207ENST00000562428 DCBLD2Q96PD2 775 aa18.3■□□□□ 0.52
NAE1-207ENST00000562428 GALR2O43603 387 aaPredicted RBP18.24■□□□□ 0.51
NAE1-207ENST00000562428 STAG3Q9UJ98 1225 aa18.19■□□□□ 0.5
NAE1-207ENST00000562428 SPDYE4A6NLX3 237 aa18.13■□□□□ 0.49
NAE1-207ENST00000562428 PHF12Q96QT6 1004 aa18.11■□□□□ 0.49
NAE1-207ENST00000562428 POTEB2H3BUK9 544 aa18.1■□□□□ 0.49
NAE1-207ENST00000562428 MNX1P50219 401 aaPredicted RBP18.07■□□□□ 0.48
NAE1-207ENST00000562428 OTUD5Q96G74 571 aa18.07■□□□□ 0.48
NAE1-207ENST00000562428 PELP1Q8IZL8 1130 aaKnown RBP17.99■□□□□ 0.47
NAE1-207ENST00000562428 PLSCR2Q9NRY7 297 aa17.95■□□□□ 0.46
NAE1-207ENST00000562428 PAK3O75914 559 aaPredicted RBP17.94■□□□□ 0.46
NAE1-207ENST00000562428 EHMT2Q96KQ7 1210 aa17.94■□□□□ 0.46
NAE1-207ENST00000562428 NPM1P06748 294 aaKnown RBP eCLIP17.88■□□□□ 0.45
NAE1-207ENST00000562428 MS4A3Q96HJ5 214 aa17.84■□□□□ 0.45
NAE1-207ENST00000562428 ASTLQ6HA08 431 aaPredicted RBP17.79■□□□□ 0.44
NAE1-207ENST00000562428 POTEJP0CG39 1038 aa17.78■□□□□ 0.44
NAE1-207ENST00000562428 ATMINO43313 823 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms