RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 COL18A1P39060 1754 aa13.12□□□□□ -0.31
LINC00566-201ENST00000561557 PER1O15534 1290 aaPredicted RBP13.12□□□□□ -0.31
LINC00566-201ENST00000561557 SLAIN1Q8ND83 568 aa13.12□□□□□ -0.31
LINC00566-201ENST00000561557 IP6K1Q92551 441 aa13.12□□□□□ -0.31
LINC00566-201ENST00000561557 STRN4Q9NRL3 753 aa13.12□□□□□ -0.31
LINC00566-201ENST00000561557 AXIN2Q9Y2T1 843 aa13.12□□□□□ -0.31
LINC00566-201ENST00000561557 THRAP3Q9Y2W1 955 aaKnown RBP13.12□□□□□ -0.31
LINC00566-201ENST00000561557 KIF24Q5T7B8 1368 aa13.11□□□□□ -0.31
LINC00566-201ENST00000561557 SPATA31A1Q5TZJ5 1347 aa13.11□□□□□ -0.31
LINC00566-201ENST00000561557 COL5A2P05997 1499 aaPredicted RBP13.1□□□□□ -0.31
LINC00566-201ENST00000561557 AMPHP49418 695 aa13.1□□□□□ -0.31
LINC00566-201ENST00000561557 LARP1Q6PKG0 1096 aaKnown RBP13.1□□□□□ -0.31
LINC00566-201ENST00000561557 BLMP54132 1417 aaPredicted RBP13.1□□□□□ -0.31
LINC00566-201ENST00000561557 MAP3K19Q56UN5 1328 aa13.1□□□□□ -0.31
LINC00566-201ENST00000561557 WDR17Q8IZU2 1322 aa13.1□□□□□ -0.31
LINC00566-201ENST00000561557 RTL1A6NKG5 1358 aa13.09□□□□□ -0.31
LINC00566-201ENST00000561557 NPC1L1Q9UHC9 1359 aa13.09□□□□□ -0.31
LINC00566-201ENST00000561557 AMER1Q5JTC6 1135 aaPredicted RBP13.09□□□□□ -0.31
LINC00566-201ENST00000561557 BARGINQ6ZT62 677 aa13.09□□□□□ -0.31
LINC00566-201ENST00000561557 GLI3P10071 1580 aa13.08□□□□□ -0.32
LINC00566-201ENST00000561557 CRB1P82279 1406 aa13.08□□□□□ -0.32
LINC00566-201ENST00000561557 LTN1O94822 1766 aa13.08□□□□□ -0.32
LINC00566-201ENST00000561557 CSB-PGBD3P0DP91 1061 aa13.08□□□□□ -0.32
LINC00566-201ENST00000561557 HOXC9P31274 260 aa13.08□□□□□ -0.32
LINC00566-201ENST00000561557 TOM1L2Q6ZVM7 507 aa13.08□□□□□ -0.32
LINC00566-201ENST00000561557 MORC1Q86VD1 984 aa13.08□□□□□ -0.32
LINC00566-201ENST00000561557 TCP11L2Q8N4U5 519 aa13.08□□□□□ -0.32
LINC00566-201ENST00000561557 ANKRD26Q9UPS8 1709 aa13.08□□□□□ -0.32
LINC00566-201ENST00000561557 RRS1Q15050 365 aaKnown RBP13.07□□□□□ -0.32
LINC00566-201ENST00000561557 CARD10Q9BWT7 1032 aa13.07□□□□□ -0.32
LINC00566-201ENST00000561557 ERBB3P21860 1342 aa13.07□□□□□ -0.32
LINC00566-201ENST00000561557 RGS12O14924 1447 aa13.06□□□□□ -0.32
LINC00566-201ENST00000561557 TTLL13PA6NNM8 815 aa13.06□□□□□ -0.32
LINC00566-201ENST00000561557 SOCS7O14512 581 aa13.06□□□□□ -0.32
LINC00566-201ENST00000561557 MAP3K13O43283 966 aa13.06□□□□□ -0.32
LINC00566-201ENST00000561557 FBLN1P23142 703 aa13.06□□□□□ -0.32
LINC00566-201ENST00000561557 FAM98CQ17RN3 349 aaKnown RBP13.06□□□□□ -0.32
LINC00566-201ENST00000561557 SEPT12Q8IYM1 358 aa13.06□□□□□ -0.32
LINC00566-201ENST00000561557 ANKRD24Q8TF21 1146 aa13.06□□□□□ -0.32
LINC00566-201ENST00000561557 CDCA7Q9BWT1 371 aaPredicted RBP13.06□□□□□ -0.32
LINC00566-201ENST00000561557 FLT4P35916 1363 aa13.06□□□□□ -0.32
LINC00566-201ENST00000561557 RGPD5Q99666 1765 aa13.05□□□□□ -0.32
LINC00566-201ENST00000561557 POLKQ9UBT6 870 aa13.05□□□□□ -0.32
LINC00566-201ENST00000561557 INSRP06213 1382 aa13.05□□□□□ -0.32
LINC00566-201ENST00000561557 USP35Q9P2H5 1018 aa13.04□□□□□ -0.32
LINC00566-201ENST00000561557 MAP2P11137 1827 aaKnown RBP13.04□□□□□ -0.32
LINC00566-201ENST00000561557 NLRP2Q9NX02 1062 aa13.03□□□□□ -0.32
LINC00566-201ENST00000561557 EMILIN1Q9Y6C2 1016 aa13.03□□□□□ -0.32
LINC00566-201ENST00000561557 SMG6Q86US8 1419 aaKnown RBP13.03□□□□□ -0.32
LINC00566-201ENST00000561557 A0A0G2JS52 829 aa13.02□□□□□ -0.33
LINC00566-201ENST00000561557 TNNT2P45379 298 aaPredicted RBP13.02□□□□□ -0.33
LINC00566-201ENST00000561557 MYT1Q01538 1121 aa13.02□□□□□ -0.33
LINC00566-201ENST00000561557 HSP90AB2PQ58FF8 381 aa13.02□□□□□ -0.33
LINC00566-201ENST00000561557 KRT27Q7Z3Y8 459 aa13.02□□□□□ -0.33
LINC00566-201ENST00000561557 PPM1GO15355 546 aaPredicted RBP13.01□□□□□ -0.33
LINC00566-201ENST00000561557 CC2D1BQ5T0F9 858 aaKnown RBP13.01□□□□□ -0.33
LINC00566-201ENST00000561557 IER5LQ5T953 404 aa13.01□□□□□ -0.33
LINC00566-201ENST00000561557 LTV1Q96GA3 475 aaPredicted RBP13.01□□□□□ -0.33
LINC00566-201ENST00000561557 FAM208AQ9UK61 1670 aaKnown RBP13.01□□□□□ -0.33
LINC00566-201ENST00000561557 THSD7AQ9UPZ6 1657 aa13□□□□□ -0.33
LINC00566-201ENST00000561557 IL2RBP14784 551 aa12.99□□□□□ -0.33
LINC00566-201ENST00000561557 PDE3BQ13370 1112 aa12.99□□□□□ -0.33
LINC00566-201ENST00000561557 CCDC125Q86Z20 511 aa12.99□□□□□ -0.33
LINC00566-201ENST00000561557 TMEM121BQ9BXQ6 578 aaPredicted RBP12.99□□□□□ -0.33
LINC00566-201ENST00000561557 TRIM35Q9UPQ4 493 aa12.99□□□□□ -0.33
LINC00566-201ENST00000561557 ZNF316A6NFI3 1004 aaPredicted RBP12.98□□□□□ -0.33
LINC00566-201ENST00000561557 EXOC5O00471 708 aa12.98□□□□□ -0.33
LINC00566-201ENST00000561557 DDX10Q13206 875 aaKnown RBP12.98□□□□□ -0.33
LINC00566-201ENST00000561557 DDB1Q16531 1140 aa12.98□□□□□ -0.33
LINC00566-201ENST00000561557 PEAK1Q9H792 1746 aa12.98□□□□□ -0.33
LINC00566-201ENST00000561557 DISP2A7MBM2 1401 aa12.97□□□□□ -0.33
LINC00566-201ENST00000561557 BRWD3Q6RI45 1802 aa12.97□□□□□ -0.33
LINC00566-201ENST00000561557 NBPF6Q5VWK0 638 aa12.97□□□□□ -0.33
LINC00566-201ENST00000561557 NBPF4Q96M43 638 aa12.97□□□□□ -0.33
LINC00566-201ENST00000561557 PARP4Q9UKK3 1724 aaKnown RBP12.96□□□□□ -0.33
LINC00566-201ENST00000561557 MTHFSP49914 203 aa12.96□□□□□ -0.33
LINC00566-201ENST00000561557 FAM196AQ6ZSG2 479 aa12.96□□□□□ -0.33
LINC00566-201ENST00000561557 UPF1Q92900 1129 aaKnown RBP eCLIP12.96□□□□□ -0.33
LINC00566-201ENST00000561557 EIF4A2Q14240 407 aaKnown RBP12.95□□□□□ -0.34
LINC00566-201ENST00000561557 TATP17735 454 aaPredicted RBP12.94□□□□□ -0.34
LINC00566-201ENST00000561557 RAPGEF4Q8WZA2 1011 aa12.94□□□□□ -0.34
LINC00566-201ENST00000561557 EYA1Q99502 592 aa12.94□□□□□ -0.34
LINC00566-201ENST00000561557 WNK3Q9BYP7 1800 aa12.94□□□□□ -0.34
LINC00566-201ENST00000561557 NCAPD2Q15021 1401 aa12.94□□□□□ -0.34
LINC00566-201ENST00000561557 PLEKHG2Q9H7P9 1386 aa12.94□□□□□ -0.34
LINC00566-201ENST00000561557 RALBP1Q15311 655 aa12.93□□□□□ -0.34
LINC00566-201ENST00000561557 BCL9O00512 1426 aa12.92□□□□□ -0.34
LINC00566-201ENST00000561557 PPP2R1AP30153 589 aa12.92□□□□□ -0.34
LINC00566-201ENST00000561557 IL13P35225 146 aa12.92□□□□□ -0.34
LINC00566-201ENST00000561557 CNGB1Q14028 1251 aaPredicted RBP12.92□□□□□ -0.34
LINC00566-201ENST00000561557 CFAP53Q96M91 514 aa12.92□□□□□ -0.34
LINC00566-201ENST00000561557 PARD3Q8TEW0 1356 aa12.92□□□□□ -0.34
LINC00566-201ENST00000561557 RGPD2P0DJD1 1756 aa12.92□□□□□ -0.34
LINC00566-201ENST00000561557 IGSF1Q8N6C5 1336 aa12.91□□□□□ -0.34
LINC00566-201ENST00000561557 OVOS2A0A0G2JMS6 1433 aa12.91□□□□□ -0.34
LINC00566-201ENST00000561557 TNS2Q63HR2 1409 aa12.91□□□□□ -0.34
LINC00566-201ENST00000561557 DIAPH1O60610 1272 aaKnown RBP12.91□□□□□ -0.34
LINC00566-201ENST00000561557 SF3B2Q13435 895 aaKnown RBP12.91□□□□□ -0.34
LINC00566-201ENST00000561557 MARCH10Q8NA82 808 aaPredicted RBP12.91□□□□□ -0.34
LINC00566-201ENST00000561557 ZCRB1Q8TBF4 217 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms