RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ATP6V1AP38606 617 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 FAM69CQ0P6D2 419 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 MRPL58Q14197 206 aaKnown RBP2.76□□□□□ -1.97
RTF1-207ENST00000561076 PWP2Q15269 919 aaKnown RBP2.76□□□□□ -1.97
RTF1-207ENST00000561076 NBPF14Q5TI25 921 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 RNF20Q5VTR2 975 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 ALKBH2Q6NS38 261 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 TMEM92Q6UXU6 159 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 TAS1R3Q7RTX0 852 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 FILIP1Q7Z7B0 1213 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 ZBTB33Q86T24 672 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 TPCN2Q8NHX9 752 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 FAM174AQ8TBP5 190 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 KCNB2Q92953 911 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 HLA-CQ95604 372 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 DMRTB1Q96MA1 342 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 CITED4Q96RK1 184 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 CEP89Q96ST8 783 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 DUSP9Q99956 384 aaKnown RBP2.76□□□□□ -1.97
RTF1-207ENST00000561076 ADAM33Q9BZ11 813 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 ACBD3Q9H3P7 528 aa2.76□□□□□ -1.97
RTF1-207ENST00000561076 DNMT3AQ9Y6K1 912 aaPredicted RBP2.76□□□□□ -1.97
RTF1-207ENST00000561076 PSDA5PKW4 1024 aaPredicted RBP2.75□□□□□ -1.97
RTF1-207ENST00000561076 SFI1A8K8P3 1242 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 TRIM6-TRIM34B2RNG4 842 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 PPP1R3GB7ZBB8 358 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 SMAPO00193 183 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 PER1O15534 1290 aaPredicted RBP2.75□□□□□ -1.97
RTF1-207ENST00000561076 DNAJC6O75061 913 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 PEX14O75381 377 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 SSBP05455 408 aaKnown RBP eCLIP2.75□□□□□ -1.97
RTF1-207ENST00000561076 C7P10643 843 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 HSD3B2P26439 372 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 CLCN6P51797 869 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 ATN1P54259 1190 aaPredicted RBP2.75□□□□□ -1.97
RTF1-207ENST00000561076 CHMP4BP1P59074 171 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 FUT2Q10981 343 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 OS9Q13438 667 aaPredicted RBP2.75□□□□□ -1.97
RTF1-207ENST00000561076 MTMR3Q13615 1198 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 NAA30Q147X3 362 aaPredicted RBP2.75□□□□□ -1.97
RTF1-207ENST00000561076 EGFLAMQ63HQ2 1017 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 ALG1LQ6GMV1 187 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 DESI1Q6ICB0 168 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 PPP1R18Q6NYC8 613 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 TMC7Q7Z402 723 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 TMC4Q7Z404 712 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 SIX5Q8N196 739 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 PIP4P2Q8N4L2 257 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 SYMPKQ92797 1274 aaKnown RBP2.75□□□□□ -1.97
RTF1-207ENST00000561076 TRIM52Q96A61 297 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 SPACA7Q96KW9 195 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 FAM161BQ96MY7 647 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 TINF2Q9BSI4 451 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 RBCK1Q9BYM8 510 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 TRIM55Q9BYV6 548 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 PRKD2Q9BZL6 878 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 SPC25Q9HBM1 224 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 SLAIN2Q9P270 581 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 SEPT3Q9UH03 358 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 GPSM3Q9Y4H4 160 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 COL4A3BPQ9Y5P4 624 aa2.75□□□□□ -1.97
RTF1-207ENST00000561076 LGR5O75473 907 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 MYCP01106 439 aaPredicted RBP2.74□□□□□ -1.97
RTF1-207ENST00000561076 NEFLP07196 543 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 CFHP08603 1231 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 PCSK2P16519 638 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 TNNI2P48788 182 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 CLDN10P78369 228 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 ARHGAP4P98171 946 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 FANCCQ00597 558 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 EHHADHQ08426 723 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 RAD51AP2Q09MP3 1159 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 USP4Q13107 963 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 SWT1Q5T5J6 900 aaKnown RBP2.74□□□□□ -1.97
RTF1-207ENST00000561076 LYPD8Q6UX82 237 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 HS2ST1Q7LGA3 356 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 USP48Q86UV5 1035 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 HELQQ8TDG4 1101 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 GPKOWQ92917 476 aaPredicted RBP eCLIP2.74□□□□□ -1.97
RTF1-207ENST00000561076 FRMD6Q96NE9 622 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 ARHGAP9Q9BRR9 750 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 BRINP2Q9C0B6 783 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 TMX1Q9H3N1 280 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.74□□□□□ -1.97
RTF1-207ENST00000561076 KLHL42Q9P2K6 505 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 TCEAL9Q9UHQ7 104 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 TSKSQ9UJT2 592 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 SPG7Q9UQ90 795 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 CHMP3Q9Y3E7 222 aa2.74□□□□□ -1.97
RTF1-207ENST00000561076 K7ELQ4 463 aaPredicted RBP2.73□□□□□ -1.97
RTF1-207ENST00000561076 TREHO43280 583 aa2.73□□□□□ -1.97
RTF1-207ENST00000561076 EIF3JO75822 258 aaKnown RBP2.73□□□□□ -1.97
RTF1-207ENST00000561076 NUDT7P0C024 238 aa2.73□□□□□ -1.97
RTF1-207ENST00000561076 EIF4BP23588 611 aaKnown RBP2.73□□□□□ -1.97
RTF1-207ENST00000561076 DAB2P98082 770 aa2.73□□□□□ -1.97
RTF1-207ENST00000561076 FMR1Q06787 632 aaKnown RBP eCLIP2.73□□□□□ -1.97
RTF1-207ENST00000561076 RBL2Q08999 1139 aa2.73□□□□□ -1.97
RTF1-207ENST00000561076 AGERQ15109 404 aa2.73□□□□□ -1.97
RTF1-207ENST00000561076 ZNF746Q6NUN9 644 aaPredicted RBP2.73□□□□□ -1.97
RTF1-207ENST00000561076 PDXDC2PQ6P474 469 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms