RNA–Protein interactions for RNA: ENST00000561024.1

PDE8A-214, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-214ENST00000561024 NRXN3Q9Y4C0 1643 aa5.88□□□□□ -1.47
PDE8A-214ENST00000561024 IBTKQ9P2D0 1353 aaPredicted RBP5.88□□□□□ -1.47
PDE8A-214ENST00000561024 LOC102724159A0A0B4J2E5 919 aa5.88□□□□□ -1.47
PDE8A-214ENST00000561024 CT47B1P0C2W7 299 aaPredicted RBP5.88□□□□□ -1.47
PDE8A-214ENST00000561024 IDI1Q13907 227 aa5.88□□□□□ -1.47
PDE8A-214ENST00000561024 PWP2Q15269 919 aaKnown RBP5.88□□□□□ -1.47
PDE8A-214ENST00000561024 EXOC8Q8IYI6 725 aa5.88□□□□□ -1.47
PDE8A-214ENST00000561024 DDX19BQ9UMR2 479 aa5.88□□□□□ -1.47
PDE8A-214ENST00000561024 PIK3R4Q99570 1358 aa5.88□□□□□ -1.47
PDE8A-214ENST00000561024 KLHL40Q2TBA0 621 aa5.88□□□□□ -1.47
PDE8A-214ENST00000561024 HS1BP3Q53T59 392 aa5.88□□□□□ -1.47
PDE8A-214ENST00000561024 MORC1Q86VD1 984 aa5.88□□□□□ -1.47
PDE8A-214ENST00000561024 DDX49Q9Y6V7 483 aaKnown RBP5.88□□□□□ -1.47
PDE8A-214ENST00000561024 SETD1AO15047 1707 aaKnown RBP5.88□□□□□ -1.47
PDE8A-214ENST00000561024 MYOM2P54296 1465 aa5.87□□□□□ -1.47
PDE8A-214ENST00000561024 XRN1Q8IZH2 1706 aaKnown RBP5.87□□□□□ -1.47
PDE8A-214ENST00000561024 K7ELQ4 463 aaPredicted RBP5.87□□□□□ -1.47
PDE8A-214ENST00000561024 VASPP50552 380 aaPredicted RBP5.87□□□□□ -1.47
PDE8A-214ENST00000561024 RIPK4P57078 832 aa5.87□□□□□ -1.47
PDE8A-214ENST00000561024 HSP90AB4PQ58FF6 505 aa5.87□□□□□ -1.47
PDE8A-214ENST00000561024 ITPRIPQ8IWB1 547 aa5.87□□□□□ -1.47
PDE8A-214ENST00000561024 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.87□□□□□ -1.47
PDE8A-214ENST00000561024 EID1Q9Y6B2 187 aa5.87□□□□□ -1.47
PDE8A-214ENST00000561024 GABBR2O75899 941 aa5.87□□□□□ -1.47
PDE8A-214ENST00000561024 HDGFP51858 240 aaKnown RBP5.87□□□□□ -1.47
PDE8A-214ENST00000561024 CLEC17AQ6ZS10 378 aa5.87□□□□□ -1.47
PDE8A-214ENST00000561024 SMC4Q9NTJ3 1288 aa5.87□□□□□ -1.47
PDE8A-214ENST00000561024 FAM13BQ9NYF5 915 aa5.87□□□□□ -1.47
PDE8A-214ENST00000561024 R3HCC1Q9Y3T6 440 aaKnown RBP5.87□□□□□ -1.47
PDE8A-214ENST00000561024 STRCP1A6NGW2 1772 aa5.86□□□□□ -1.47
PDE8A-214ENST00000561024 CHD2O14647 1828 aaKnown RBP5.86□□□□□ -1.47
PDE8A-214ENST00000561024 TRIM27P14373 513 aa5.86□□□□□ -1.47
PDE8A-214ENST00000561024 TNNT2P45379 298 aaPredicted RBP5.86□□□□□ -1.47
PDE8A-214ENST00000561024 MTERF4Q7Z6M4 381 aaKnown RBP5.86□□□□□ -1.47
PDE8A-214ENST00000561024 CFAP53Q96M91 514 aa5.86□□□□□ -1.47
PDE8A-214ENST00000561024 RPGRIP1LQ68CZ1 1315 aa5.86□□□□□ -1.47
PDE8A-214ENST00000561024 NCKAP5LQ9HCH0 1330 aa5.86□□□□□ -1.47
PDE8A-214ENST00000561024 ZNF500O60304 480 aaPredicted RBP5.86□□□□□ -1.47
PDE8A-214ENST00000561024 SSFA2P28290 1259 aa5.86□□□□□ -1.47
PDE8A-214ENST00000561024 NUCB1Q02818 461 aa5.86□□□□□ -1.47
PDE8A-214ENST00000561024 ATF7IPQ6VMQ6 1270 aa5.86□□□□□ -1.47
PDE8A-214ENST00000561024 PRDM4Q9UKN5 801 aa5.86□□□□□ -1.47
PDE8A-214ENST00000561024 NOL7Q9UMY1 257 aaKnown RBP5.86□□□□□ -1.47
PDE8A-214ENST00000561024 KNDC1Q76NI1 1749 aa5.86□□□□□ -1.47
PDE8A-214ENST00000561024 ADAMTS13Q76LX8 1427 aa5.85□□□□□ -1.47
PDE8A-214ENST00000561024 BAG4O95429 457 aaKnown RBP5.85□□□□□ -1.47
PDE8A-214ENST00000561024 ZNF445P59923 1031 aa5.85□□□□□ -1.47
PDE8A-214ENST00000561024 BMP2KLQ5H9B9 411 aa5.85□□□□□ -1.47
PDE8A-214ENST00000561024 TMTC2Q8N394 836 aa5.85□□□□□ -1.47
PDE8A-214ENST00000561024 KIF2CQ99661 725 aa5.85□□□□□ -1.47
PDE8A-214ENST00000561024 LNPKQ9C0E8 428 aa5.85□□□□□ -1.47
PDE8A-214ENST00000561024 STAG3Q9UJ98 1225 aa5.85□□□□□ -1.47
PDE8A-214ENST00000561024 RIPOR2Q9Y4F9 1068 aa5.85□□□□□ -1.47
PDE8A-214ENST00000561024 NRXN1Q9ULB1 1477 aa5.85□□□□□ -1.47
PDE8A-214ENST00000561024 SHPRHQ149N8 1683 aa5.85□□□□□ -1.47
PDE8A-214ENST00000561024 FXR2P51116 673 aaKnown RBP eCLIP5.85□□□□□ -1.47
PDE8A-214ENST00000561024 CSPP1Q1MSJ5 1256 aa5.85□□□□□ -1.47
PDE8A-214ENST00000561024 CHD1LQ86WJ1 897 aa5.85□□□□□ -1.47
PDE8A-214ENST00000561024 ZBTB40Q9NUA8 1239 aa5.85□□□□□ -1.47
PDE8A-214ENST00000561024 KIF16BQ96L93 1317 aa5.85□□□□□ -1.47
PDE8A-214ENST00000561024 NSD3Q9BZ95 1437 aa5.85□□□□□ -1.47
PDE8A-214ENST00000561024 UQCRHLA0A096LP55 91 aa5.84□□□□□ -1.47
PDE8A-214ENST00000561024 DYNC1I1O14576 645 aa5.84□□□□□ -1.47
PDE8A-214ENST00000561024 CD2BP2O95400 341 aaKnown RBP5.84□□□□□ -1.47
PDE8A-214ENST00000561024 BRD1O95696 1058 aa5.84□□□□□ -1.47
PDE8A-214ENST00000561024 UQCRHP07919 91 aa5.84□□□□□ -1.47
PDE8A-214ENST00000561024 MTHFSP49914 203 aa5.84□□□□□ -1.47
PDE8A-214ENST00000561024 FAM193AP78312 1265 aa5.84□□□□□ -1.47
PDE8A-214ENST00000561024 SSH1Q8WYL5 1049 aa5.84□□□□□ -1.47
PDE8A-214ENST00000561024 XIRP1Q702N8 1843 aaKnown RBP5.84□□□□□ -1.47
PDE8A-214ENST00000561024 LRRC7Q96NW7 1537 aa5.84□□□□□ -1.47
PDE8A-214ENST00000561024 IPO8O15397 1037 aaKnown RBP5.84□□□□□ -1.47
PDE8A-214ENST00000561024 SMARCA5O60264 1052 aaPredicted RBP5.84□□□□□ -1.47
PDE8A-214ENST00000561024 U2AF1L5P0DN76 240 aaPredicted RBP5.84□□□□□ -1.47
PDE8A-214ENST00000561024 LTKP29376 864 aa5.84□□□□□ -1.47
PDE8A-214ENST00000561024 MCM5P33992 734 aa5.84□□□□□ -1.47
PDE8A-214ENST00000561024 U2AF1Q01081 240 aaKnown RBP eCLIP5.84□□□□□ -1.47
PDE8A-214ENST00000561024 EXOSC9Q06265 439 aaKnown RBP5.84□□□□□ -1.47
PDE8A-214ENST00000561024 ZSCAN23Q3MJ62 389 aa5.84□□□□□ -1.47
PDE8A-214ENST00000561024 TXNDC2Q86VQ3 553 aa5.84□□□□□ -1.47
PDE8A-214ENST00000561024 TMEM57Q8N5G2 664 aa5.84□□□□□ -1.47
PDE8A-214ENST00000561024 GAS2L2Q8NHY3 880 aa5.84□□□□□ -1.47
PDE8A-214ENST00000561024 TSR2Q969E8 191 aaKnown RBP5.84□□□□□ -1.47
PDE8A-214ENST00000561024 PDLIM2Q96JY6 352 aa5.84□□□□□ -1.47
PDE8A-214ENST00000561024 SLC24A3Q9HC58 644 aa5.84□□□□□ -1.47
PDE8A-214ENST00000561024 NOB1Q9ULX3 412 aaKnown RBP5.84□□□□□ -1.47
PDE8A-214ENST00000561024 U3KPZ7 1027 aaPredicted RBP5.84□□□□□ -1.47
PDE8A-214ENST00000561024 NUCB2P80303 420 aa5.83□□□□□ -1.48
PDE8A-214ENST00000561024 XPCQ01831 940 aaPredicted RBP5.83□□□□□ -1.48
PDE8A-214ENST00000561024 CFAP70Q5T0N1 1121 aa5.83□□□□□ -1.48
PDE8A-214ENST00000561024 MCTP1Q6DN14 999 aa5.83□□□□□ -1.48
PDE8A-214ENST00000561024 CAVIN1Q6NZI2 390 aaKnown RBP5.83□□□□□ -1.48
PDE8A-214ENST00000561024 SMAP1Q8IYB5 467 aaPredicted RBP5.83□□□□□ -1.48
PDE8A-214ENST00000561024 CERKQ8TCT0 537 aa5.83□□□□□ -1.48
PDE8A-214ENST00000561024 SGSM3Q96HU1 749 aa5.83□□□□□ -1.48
PDE8A-214ENST00000561024 PTCH1Q13635 1447 aa5.83□□□□□ -1.48
PDE8A-214ENST00000561024 ALKQ9UM73 1620 aa5.83□□□□□ -1.48
PDE8A-214ENST00000561024 KIAA1210Q9ULL0 1709 aa5.83□□□□□ -1.48
PDE8A-214ENST00000561024 ECM2O94769 699 aaPredicted RBP5.83□□□□□ -1.48
PDE8A-214ENST00000561024 TBC1D9Q6ZT07 1266 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 8200 ms