RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 PDE3BQ13370 1112 aa9.44□□□□□ -0.9
USP8-213ENST00000560885 CHRNA2Q15822 529 aa9.44□□□□□ -0.9
USP8-213ENST00000560885 DCAF11Q8TEB1 546 aa9.44□□□□□ -0.9
USP8-213ENST00000560885 NUDT16Q96DE0 195 aaKnown RBP9.44□□□□□ -0.9
USP8-213ENST00000560885 STRN4Q9NRL3 753 aa9.44□□□□□ -0.9
USP8-213ENST00000560885 POLR3AO14802 1390 aaPredicted RBP9.44□□□□□ -0.9
USP8-213ENST00000560885 SSH2Q76I76 1423 aa9.44□□□□□ -0.9
USP8-213ENST00000560885 CAMTA1Q9Y6Y1 1673 aa9.44□□□□□ -0.9
USP8-213ENST00000560885 KIAA1210Q9ULL0 1709 aa9.44□□□□□ -0.9
USP8-213ENST00000560885 C11orf95C9JLR9 678 aaPredicted RBP9.43□□□□□ -0.9
USP8-213ENST00000560885 EVA1CP58658 441 aa9.43□□□□□ -0.9
USP8-213ENST00000560885 NBPF8Q3BBV2 869 aa9.43□□□□□ -0.9
USP8-213ENST00000560885 NBPF14Q5TI25 921 aa9.43□□□□□ -0.9
USP8-213ENST00000560885 USP35Q9P2H5 1018 aa9.43□□□□□ -0.9
USP8-213ENST00000560885 KDM2AQ9Y2K7 1162 aa9.43□□□□□ -0.9
USP8-213ENST00000560885 CPDO75976 1380 aa9.42□□□□□ -0.9
USP8-213ENST00000560885 THRAP3Q9Y2W1 955 aaKnown RBP9.42□□□□□ -0.9
USP8-213ENST00000560885 PEAK1Q9H792 1746 aa9.42□□□□□ -0.9
USP8-213ENST00000560885 RAB3GAP2Q9H2M9 1393 aa9.41□□□□□ -0.9
USP8-213ENST00000560885 ACEP12821 1306 aa9.41□□□□□ -0.9
USP8-213ENST00000560885 YY1P25490 414 aa9.41□□□□□ -0.9
USP8-213ENST00000560885 ZNF687Q8N1G0 1237 aa9.41□□□□□ -0.9
USP8-213ENST00000560885 TCP11L2Q8N4U5 519 aa9.41□□□□□ -0.9
USP8-213ENST00000560885 CDK19Q9BWU1 502 aa9.41□□□□□ -0.9
USP8-213ENST00000560885 WNK3Q9BYP7 1800 aa9.4□□□□□ -0.9
USP8-213ENST00000560885 AKAP12Q02952 1782 aa9.4□□□□□ -0.9
USP8-213ENST00000560885 USP19O94966 1318 aa9.4□□□□□ -0.9
USP8-213ENST00000560885 PLEKHG3A1L390 1219 aa9.4□□□□□ -0.9
USP8-213ENST00000560885 VARS2Q5ST30 1063 aaKnown RBP9.4□□□□□ -0.9
USP8-213ENST00000560885 NUTM2GQ5VZR2 741 aa9.4□□□□□ -0.9
USP8-213ENST00000560885 LARP1Q6PKG0 1096 aaKnown RBP9.4□□□□□ -0.9
USP8-213ENST00000560885 ABTB2Q8N961 1025 aa9.4□□□□□ -0.9
USP8-213ENST00000560885 SPON1Q9HCB6 807 aa9.4□□□□□ -0.9
USP8-213ENST00000560885 COL5A2P05997 1499 aaPredicted RBP9.4□□□□□ -0.91
USP8-213ENST00000560885 UTRNP46939 3433 aa9.4□□□□□ -0.91
USP8-213ENST00000560885 CASZ1Q86V15 1759 aa9.4□□□□□ -0.91
USP8-213ENST00000560885 NINLQ9Y2I6 1382 aa9.39□□□□□ -0.91
USP8-213ENST00000560885 LRRC37A3O60309 1634 aa9.39□□□□□ -0.91
USP8-213ENST00000560885 KCNQ2O43526 872 aa9.39□□□□□ -0.91
USP8-213ENST00000560885 NLRP13Q86W25 1043 aa9.39□□□□□ -0.91
USP8-213ENST00000560885 PPP1R1BQ9UD71 204 aaPredicted RBP9.39□□□□□ -0.91
USP8-213ENST00000560885 OVOS2A0A0G2JMS6 1433 aa9.39□□□□□ -0.91
USP8-213ENST00000560885 OVOS2A0A0J9YW53 1432 aa9.39□□□□□ -0.91
USP8-213ENST00000560885 CRB1P82279 1406 aa9.39□□□□□ -0.91
USP8-213ENST00000560885 OVOS2Q6IE36 1432 aa9.39□□□□□ -0.91
USP8-213ENST00000560885 BRD4O60885 1362 aaPredicted RBP9.38□□□□□ -0.91
USP8-213ENST00000560885 PLSCR1O15162 318 aa9.38□□□□□ -0.91
USP8-213ENST00000560885 GCP02774 474 aa9.38□□□□□ -0.91
USP8-213ENST00000560885 QRICH2Q9H0J4 1663 aa9.37□□□□□ -0.91
USP8-213ENST00000560885 SPOCK2Q92563 424 aa9.37□□□□□ -0.91
USP8-213ENST00000560885 COL18A1P39060 1754 aa9.37□□□□□ -0.91
USP8-213ENST00000560885 RGPD5Q99666 1765 aa9.37□□□□□ -0.91
USP8-213ENST00000560885 PPIP5K1Q6PFW1 1433 aa9.36□□□□□ -0.91
USP8-213ENST00000560885 SLIT3O75094 1523 aa9.36□□□□□ -0.91
USP8-213ENST00000560885 PIK3C2AO00443 1686 aa9.35□□□□□ -0.91
USP8-213ENST00000560885 AATKQ6ZMQ8 1374 aa9.35□□□□□ -0.91
USP8-213ENST00000560885 CHD4Q14839 1912 aa9.35□□□□□ -0.91
USP8-213ENST00000560885 SRPK2P78362 688 aaKnown RBP9.34□□□□□ -0.91
USP8-213ENST00000560885 DDB1Q16531 1140 aa9.34□□□□□ -0.91
USP8-213ENST00000560885 BCL11BQ9C0K0 894 aaPredicted RBP9.34□□□□□ -0.91
USP8-213ENST00000560885 MYOM1P52179 1685 aa9.33□□□□□ -0.92
USP8-213ENST00000560885 BCL9O00512 1426 aa9.33□□□□□ -0.92
USP8-213ENST00000560885 USP6P35125 1406 aa9.33□□□□□ -0.92
USP8-213ENST00000560885 CDCA7Q9BWT1 371 aaPredicted RBP9.33□□□□□ -0.92
USP8-213ENST00000560885 CIZ1Q9ULV3 898 aaPredicted RBP9.33□□□□□ -0.92
USP8-213ENST00000560885 CENPJQ9HC77 1338 aaPredicted RBP9.32□□□□□ -0.92
USP8-213ENST00000560885 NLRP6P59044 892 aa9.32□□□□□ -0.92
USP8-213ENST00000560885 GPR153Q6NV75 609 aa9.32□□□□□ -0.92
USP8-213ENST00000560885 TOM1L2Q6ZVM7 507 aa9.32□□□□□ -0.92
USP8-213ENST00000560885 MICALL2Q8IY33 904 aa9.32□□□□□ -0.92
USP8-213ENST00000560885 WDR17Q8IZU2 1322 aa9.31□□□□□ -0.92
USP8-213ENST00000560885 NBPF1Q3BBV0 1214 aa9.31□□□□□ -0.92
USP8-213ENST00000560885 ANO8Q9HCE9 1232 aaPredicted RBP9.31□□□□□ -0.92
USP8-213ENST00000560885 GOLGB1Q14789 3259 aaKnown RBP9.31□□□□□ -0.92
USP8-213ENST00000560885 TRPM1Q7Z4N2 1603 aa9.31□□□□□ -0.92
USP8-213ENST00000560885 CPSF1Q10570 1443 aaKnown RBP9.31□□□□□ -0.92
USP8-213ENST00000560885 NHSQ6T4R5 1651 aa9.3□□□□□ -0.92
USP8-213ENST00000560885 ZBTB7CA1YPR0 619 aa9.3□□□□□ -0.92
USP8-213ENST00000560885 EFCAB3Q8N7B9 438 aa9.3□□□□□ -0.92
USP8-213ENST00000560885 MARCH10Q8NA82 808 aaPredicted RBP9.3□□□□□ -0.92
USP8-213ENST00000560885 CABP1Q9NZU7 370 aa9.3□□□□□ -0.92
USP8-213ENST00000560885 ABCC6O95255 1503 aa9.3□□□□□ -0.92
USP8-213ENST00000560885 SOX12O15370 315 aa9.29□□□□□ -0.92
USP8-213ENST00000560885 PTF1AQ7RTS3 328 aa9.29□□□□□ -0.92
USP8-213ENST00000560885 ARHGEF25Q86VW2 580 aa9.29□□□□□ -0.92
USP8-213ENST00000560885 KCNH5Q8NCM2 988 aa9.29□□□□□ -0.92
USP8-213ENST00000560885 PDGFDQ9GZP0 370 aaPredicted RBP9.29□□□□□ -0.92
USP8-213ENST00000560885 AXIN2Q9Y2T1 843 aa9.29□□□□□ -0.92
USP8-213ENST00000560885 EXOC5O00471 708 aa9.28□□□□□ -0.92
USP8-213ENST00000560885 ZBTB7AO95365 584 aa9.28□□□□□ -0.92
USP8-213ENST00000560885 SLC15A2Q16348 729 aa9.28□□□□□ -0.92
USP8-213ENST00000560885 TXNRD1Q16881 649 aa9.28□□□□□ -0.92
USP8-213ENST00000560885 CARD10Q9BWT7 1032 aa9.28□□□□□ -0.92
USP8-213ENST00000560885 STK32BQ9NY57 414 aa9.28□□□□□ -0.92
USP8-213ENST00000560885 QSER1Q2KHR3 1735 aa9.28□□□□□ -0.92
USP8-213ENST00000560885 MON2Q7Z3U7 1717 aa9.28□□□□□ -0.92
USP8-213ENST00000560885 LTN1O94822 1766 aa9.27□□□□□ -0.92
USP8-213ENST00000560885 CCDC7Q96M83 1385 aa9.27□□□□□ -0.93
USP8-213ENST00000560885 NFAT5O94916 1531 aa9.27□□□□□ -0.93
USP8-213ENST00000560885 USP54Q70EL1 1684 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms