RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 USP4Q13107 963 aa5.57□□□□□ -1.52
TDP1-217ENST00000557782 FKBP5Q13451 457 aaPredicted RBP5.57□□□□□ -1.52
TDP1-217ENST00000557782 C9orf131Q5VYM1 1079 aa5.57□□□□□ -1.52
TDP1-217ENST00000557782 TMC7Q7Z402 723 aa5.57□□□□□ -1.52
TDP1-217ENST00000557782 NOP9Q86U38 636 aaKnown RBP5.57□□□□□ -1.52
TDP1-217ENST00000557782 LRCH3Q96II8 777 aa5.57□□□□□ -1.52
TDP1-217ENST00000557782 HIRIP3Q9BW71 556 aaPredicted RBP5.57□□□□□ -1.52
TDP1-217ENST00000557782 CCSER2Q9H7U1 834 aa5.57□□□□□ -1.52
TDP1-217ENST00000557782 METTL5Q9NRN9 209 aaKnown RBP5.57□□□□□ -1.52
TDP1-217ENST00000557782 CUEDC1Q9NWM3 386 aaPredicted RBP5.57□□□□□ -1.52
TDP1-217ENST00000557782 PCDHGA11Q9Y5H2 935 aa5.57□□□□□ -1.52
TDP1-217ENST00000557782 ARHGAP33O14559 1287 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 TREHO43280 583 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 FOXO3O43524 673 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 SORBS3O60504 671 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 PRPF40AO75400 957 aaKnown RBP5.56□□□□□ -1.52
TDP1-217ENST00000557782 LGR5O75473 907 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 NPR3P17342 541 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 ATP2B2Q01814 1243 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 FMR1Q06787 632 aaKnown RBP eCLIP5.56□□□□□ -1.52
TDP1-217ENST00000557782 RAD51AP2Q09MP3 1159 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 GNL2Q13823 731 aaKnown RBP5.56□□□□□ -1.52
TDP1-217ENST00000557782 NBPF20Q3BBV1 942 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 MSS51Q4VC12 460 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 GIMAP6Q6P9H5 292 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 NT5DC4Q86YG4 428 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 SLC43A3Q8NBI5 491 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 TMC1Q8TDI8 760 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 RNF34Q969K3 372 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 ZFRQ96KR1 1074 aaKnown RBP5.56□□□□□ -1.52
TDP1-217ENST00000557782 CITED4Q96RK1 184 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 TGIF2Q9GZN2 237 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 BRPF3Q9ULD4 1205 aa5.56□□□□□ -1.52
TDP1-217ENST00000557782 TMA7Q9Y2S6 64 aaKnown RBP5.56□□□□□ -1.52
TDP1-217ENST00000557782 SNPHO15079 494 aa5.55□□□□□ -1.52
TDP1-217ENST00000557782 DXOO77932 396 aaKnown RBP5.55□□□□□ -1.52
TDP1-217ENST00000557782 LDHBP07195 334 aaKnown RBP5.55□□□□□ -1.52
TDP1-217ENST00000557782 ATP2B1P20020 1258 aa5.55□□□□□ -1.52
TDP1-217ENST00000557782 MAPK8P45983 427 aa5.55□□□□□ -1.52
TDP1-217ENST00000557782 SH3BP5LQ7L8J4 393 aa5.55□□□□□ -1.52
TDP1-217ENST00000557782 SCUBE3Q8IX30 993 aa5.55□□□□□ -1.52
TDP1-217ENST00000557782 TSEN2Q8NCE0 465 aaKnown RBP5.55□□□□□ -1.52
TDP1-217ENST00000557782 VTI1AQ96AJ9 217 aa5.55□□□□□ -1.52
TDP1-217ENST00000557782 THAP11Q96EK4 314 aa5.55□□□□□ -1.52
TDP1-217ENST00000557782 DMRTB1Q96MA1 342 aa5.55□□□□□ -1.52
TDP1-217ENST00000557782 DNAJC2Q99543 621 aaKnown RBP5.55□□□□□ -1.52
TDP1-217ENST00000557782 TINF2Q9BSI4 451 aa5.55□□□□□ -1.52
TDP1-217ENST00000557782 CARD14Q9BXL6 1004 aa5.55□□□□□ -1.52
TDP1-217ENST00000557782 CAPN10Q9HC96 672 aa5.55□□□□□ -1.52
TDP1-217ENST00000557782 NLRP2Q9NX02 1062 aa5.55□□□□□ -1.52
TDP1-217ENST00000557782 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.55□□□□□ -1.52
TDP1-217ENST00000557782 PRKAG2Q9UGJ0 569 aa5.55□□□□□ -1.52
TDP1-217ENST00000557782 PARP2Q9UGN5 583 aa5.55□□□□□ -1.52
TDP1-217ENST00000557782 MAGEB6P1A0A0J9YX57 407 aa5.54□□□□□ -1.52
TDP1-217ENST00000557782 GIGYF1O75420 1035 aaPredicted RBP5.54□□□□□ -1.52
TDP1-217ENST00000557782 IGFBP4P22692 258 aa5.54□□□□□ -1.52
TDP1-217ENST00000557782 MPSTP25325 297 aa5.54□□□□□ -1.52
TDP1-217ENST00000557782 PLCB3Q01970 1234 aa5.54□□□□□ -1.52
TDP1-217ENST00000557782 PSMD2Q13200 908 aa5.54□□□□□ -1.52
TDP1-217ENST00000557782 NAA30Q147X3 362 aaPredicted RBP5.54□□□□□ -1.52
TDP1-217ENST00000557782 ALKBH2Q6NS38 261 aa5.54□□□□□ -1.52
TDP1-217ENST00000557782 METTL16Q86W50 562 aaKnown RBP5.54□□□□□ -1.52
TDP1-217ENST00000557782 ARMC5Q96C12 935 aa5.54□□□□□ -1.52
TDP1-217ENST00000557782 SLC10A4Q96EP9 437 aa5.54□□□□□ -1.52
TDP1-217ENST00000557782 PRKD2Q9BZL6 878 aa5.54□□□□□ -1.52
TDP1-217ENST00000557782 LNPKQ9C0E8 428 aa5.54□□□□□ -1.52
TDP1-217ENST00000557782 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.54□□□□□ -1.52
TDP1-217ENST00000557782 VTI1BQ9UEU0 232 aa5.54□□□□□ -1.52
TDP1-217ENST00000557782 VPS9D1Q9Y2B5 631 aa5.54□□□□□ -1.52
TDP1-217ENST00000557782 PCDHB3Q9Y5E6 796 aa5.54□□□□□ -1.52
TDP1-217ENST00000557782 PCDHB11Q9Y5F2 797 aa5.54□□□□□ -1.52
TDP1-217ENST00000557782 MYCP01106 439 aaPredicted RBP5.53□□□□□ -1.52
TDP1-217ENST00000557782 POTEIP0CG38 1075 aa5.53□□□□□ -1.52
TDP1-217ENST00000557782 GTF2F1P35269 517 aaKnown RBP eCLIP5.53□□□□□ -1.52
TDP1-217ENST00000557782 ZNF76P36508 570 aa5.53□□□□□ -1.52
TDP1-217ENST00000557782 PDE3BQ13370 1112 aa5.53□□□□□ -1.52
TDP1-217ENST00000557782 AAMPQ13685 434 aa5.53□□□□□ -1.52
TDP1-217ENST00000557782 LDLRAD1Q5T700 205 aa5.53□□□□□ -1.52
TDP1-217ENST00000557782 CAPN12Q6ZSI9 719 aa5.53□□□□□ -1.52
TDP1-217ENST00000557782 TMC4Q7Z404 712 aa5.53□□□□□ -1.52
TDP1-217ENST00000557782 DUSP9Q99956 384 aaKnown RBP5.53□□□□□ -1.52
TDP1-217ENST00000557782 MMP16P51512 607 aa5.52□□□□□ -1.53
TDP1-217ENST00000557782 DAB2P98082 770 aa5.52□□□□□ -1.53
TDP1-217ENST00000557782 FANCCQ00597 558 aa5.52□□□□□ -1.53
TDP1-217ENST00000557782 EHHADHQ08426 723 aa5.52□□□□□ -1.53
TDP1-217ENST00000557782 SEPT12Q8IYM1 358 aa5.52□□□□□ -1.53
TDP1-217ENST00000557782 PURBQ96QR8 312 aaKnown RBP5.52□□□□□ -1.53
TDP1-217ENST00000557782 POLR3GLQ9BT43 218 aa5.52□□□□□ -1.53
TDP1-217ENST00000557782 UNC93B1Q9H1C4 597 aa5.52□□□□□ -1.53
TDP1-217ENST00000557782 SCUBE2Q9NQ36 999 aa5.52□□□□□ -1.53
TDP1-217ENST00000557782 PBX2P40425 430 aa5.51□□□□□ -1.53
TDP1-217ENST00000557782 PPP4CP60510 307 aa5.51□□□□□ -1.53
TDP1-217ENST00000557782 DSC3Q14574 896 aa5.51□□□□□ -1.53
TDP1-217ENST00000557782 AGERQ15109 404 aa5.51□□□□□ -1.53
TDP1-217ENST00000557782 ERFEQ4G0M1 354 aa5.51□□□□□ -1.53
TDP1-217ENST00000557782 DMRTA1Q5VZB9 504 aa5.51□□□□□ -1.53
TDP1-217ENST00000557782 SH3RF1Q7Z6J0 888 aa5.51□□□□□ -1.53
TDP1-217ENST00000557782 BPHLQ86WA6 291 aaPredicted RBP5.51□□□□□ -1.53
TDP1-217ENST00000557782 MRPL50Q8N5N7 158 aaKnown RBP5.51□□□□□ -1.53
TDP1-217ENST00000557782 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms