RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 CEP164Q9UPV0 1460 aa7.25□□□□□ -1.25
ATXN3-241ENST00000556374 SLC35F4A4IF30 521 aa7.25□□□□□ -1.25
ATXN3-241ENST00000556374 GPC1P35052 558 aa7.25□□□□□ -1.25
ATXN3-241ENST00000556374 ARAP1Q96P48 1450 aa7.24□□□□□ -1.25
ATXN3-241ENST00000556374 ERVH48-1M5A8F1 160 aa7.24□□□□□ -1.25
ATXN3-241ENST00000556374 LILRA1O75019 489 aa7.24□□□□□ -1.25
ATXN3-241ENST00000556374 PTGIRP43119 386 aa7.24□□□□□ -1.25
ATXN3-241ENST00000556374 BRPF1P55201 1214 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-241ENST00000556374 SUZ12Q15022 739 aaKnown RBP7.24□□□□□ -1.25
ATXN3-241ENST00000556374 ZNF784Q8NCA9 323 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-241ENST00000556374 GMCL1Q96IK5 515 aa7.24□□□□□ -1.25
ATXN3-241ENST00000556374 NR1H3Q13133 447 aa7.23□□□□□ -1.25
ATXN3-241ENST00000556374 IL27Q8NEV9 243 aa7.23□□□□□ -1.25
ATXN3-241ENST00000556374 RNF144AP50876 292 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-241ENST00000556374 CCDC155Q8N6L0 562 aa7.22□□□□□ -1.25
ATXN3-241ENST00000556374 RNF217Q8TC41 542 aa7.22□□□□□ -1.25
ATXN3-241ENST00000556374 CADPSQ9ULU8 1353 aa7.21□□□□□ -1.25
ATXN3-241ENST00000556374 CHD1O14646 1710 aa7.21□□□□□ -1.25
ATXN3-241ENST00000556374 NDUFB9Q9Y6M9 179 aa7.21□□□□□ -1.26
ATXN3-241ENST00000556374 FBXO45P0C2W1 286 aa7.2□□□□□ -1.26
ATXN3-241ENST00000556374 ITGA6P23229 1130 aa7.2□□□□□ -1.26
ATXN3-241ENST00000556374 ADD1P35611 737 aaKnown RBP7.2□□□□□ -1.26
ATXN3-241ENST00000556374 CTSOP43234 321 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-241ENST00000556374 ERVK-9P63128 1117 aa7.2□□□□□ -1.26
ATXN3-241ENST00000556374 RELBQ01201 579 aa7.2□□□□□ -1.26
ATXN3-241ENST00000556374 KCTD17Q8N5Z5 321 aa7.2□□□□□ -1.26
ATXN3-241ENST00000556374 KDF1Q8NAX2 398 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-241ENST00000556374 PRM3Q9NNZ6 103 aa7.2□□□□□ -1.26
ATXN3-241ENST00000556374 POLMQ9NP87 494 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-241ENST00000556374 TMPRSS4Q9NRS4 437 aa7.2□□□□□ -1.26
ATXN3-241ENST00000556374 WDR44Q5JSH3 913 aa7.19□□□□□ -1.26
ATXN3-241ENST00000556374 CC2D2BQ6DHV5 1058 aa7.19□□□□□ -1.26
ATXN3-241ENST00000556374 SV2AQ7L0J3 742 aa7.19□□□□□ -1.26
ATXN3-241ENST00000556374 LYSMD3Q7Z3D4 306 aa7.19□□□□□ -1.26
ATXN3-241ENST00000556374 INSM2Q96T92 566 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-241ENST00000556374 FIGNL2A6NMB9 653 aa7.18□□□□□ -1.26
ATXN3-241ENST00000556374 ATP5J2-PTCD1G3V325 749 aa7.18□□□□□ -1.26
ATXN3-241ENST00000556374 FOXD4L5Q5VV16 416 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-241ENST00000556374 AGBL1Q96MI9 1066 aa7.18□□□□□ -1.26
ATXN3-241ENST00000556374 PCDHB9Q9Y5E1 797 aa7.18□□□□□ -1.26
ATXN3-241ENST00000556374 FANCD2Q9BXW9 1451 aa7.17□□□□□ -1.26
ATXN3-241ENST00000556374 GIGYF1O75420 1035 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-241ENST00000556374 CYB5RLQ6IPT4 315 aa7.17□□□□□ -1.26
ATXN3-241ENST00000556374 CYP2U1Q7Z449 544 aa7.17□□□□□ -1.26
ATXN3-241ENST00000556374 ZNF395Q9H8N7 513 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-241ENST00000556374 URB2Q14146 1524 aaKnown RBP7.17□□□□□ -1.26
ATXN3-241ENST00000556374 SLURP2P0DP57 97 aa7.16□□□□□ -1.26
ATXN3-241ENST00000556374 KCNMA1Q12791 1236 aa7.16□□□□□ -1.26
ATXN3-241ENST00000556374 MTMR14Q8NCE2 650 aa7.16□□□□□ -1.26
ATXN3-241ENST00000556374 EIF4G3O43432 1585 aaKnown RBP7.16□□□□□ -1.26
ATXN3-241ENST00000556374 SENP3-EIF4A1A0A087X0R7 540 aa7.15□□□□□ -1.26
ATXN3-241ENST00000556374 RNF225M0QZC1 329 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-241ENST00000556374 GPR161Q8N6U8 529 aaKnown RBP7.15□□□□□ -1.26
ATXN3-241ENST00000556374 COL25A1Q9BXS0 654 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-241ENST00000556374 RSF1Q96T23 1441 aaPredicted RBP7.15□□□□□ -1.27
ATXN3-241ENST00000556374 PRDM2Q13029 1718 aa7.15□□□□□ -1.27
ATXN3-241ENST00000556374 TRAK2O60296 914 aa7.14□□□□□ -1.27
ATXN3-241ENST00000556374 CLN3Q13286 438 aa7.14□□□□□ -1.27
ATXN3-241ENST00000556374 CYLDQ9NQC7 956 aa7.14□□□□□ -1.27
ATXN3-241ENST00000556374 DYRK1BQ9Y463 629 aa7.14□□□□□ -1.27
ATXN3-241ENST00000556374 SPATA31C2B4DYI2 1134 aa7.13□□□□□ -1.27
ATXN3-241ENST00000556374 H7C1W4 665 aa7.13□□□□□ -1.27
ATXN3-241ENST00000556374 GPR37L1O60883 481 aa7.13□□□□□ -1.27
ATXN3-241ENST00000556374 GNRH1P01148 92 aa7.13□□□□□ -1.27
ATXN3-241ENST00000556374 RAB15P59190 212 aa7.13□□□□□ -1.27
ATXN3-241ENST00000556374 KRT76Q01546 638 aa7.13□□□□□ -1.27
ATXN3-241ENST00000556374 ZNF608Q9ULD9 1512 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-241ENST00000556374 A0A1W2PRU2 124 aa7.12□□□□□ -1.27
ATXN3-241ENST00000556374 SRSF11Q05519 484 aaKnown RBP7.12□□□□□ -1.27
ATXN3-241ENST00000556374 TRIM22Q8IYM9 498 aa7.12□□□□□ -1.27
ATXN3-241ENST00000556374 TMEM151AQ8N4L1 468 aa7.12□□□□□ -1.27
ATXN3-241ENST00000556374 CNTNAP3BQ96NU0 1288 aa7.12□□□□□ -1.27
ATXN3-241ENST00000556374 CNTNAP3Q9BZ76 1288 aa7.12□□□□□ -1.27
ATXN3-241ENST00000556374 GRIP2Q9C0E4 1043 aa7.12□□□□□ -1.27
ATXN3-241ENST00000556374 ESF1Q9H501 851 aaKnown RBP7.12□□□□□ -1.27
ATXN3-241ENST00000556374 LRRC4BQ9NT99 713 aa7.12□□□□□ -1.27
ATXN3-241ENST00000556374 MROH2BQ7Z745 1585 aa7.12□□□□□ -1.27
ATXN3-241ENST00000556374 EIF4G2P78344 907 aaKnown RBP eCLIP7.11□□□□□ -1.27
ATXN3-241ENST00000556374 FOXR1Q6PIV2 292 aa7.11□□□□□ -1.27
ATXN3-241ENST00000556374 VWA5B2Q8N398 1253 aa7.11□□□□□ -1.27
ATXN3-241ENST00000556374 NLRP3Q96P20 1036 aa7.11□□□□□ -1.27
ATXN3-241ENST00000556374 IFT140Q96RY7 1462 aa7.11□□□□□ -1.27
ATXN3-241ENST00000556374 GDF11O95390 407 aa7.1□□□□□ -1.27
ATXN3-241ENST00000556374 SIRT1Q96EB6 747 aa7.1□□□□□ -1.27
ATXN3-241ENST00000556374 CEP126Q9P2H0 1117 aa7.1□□□□□ -1.27
ATXN3-241ENST00000556374 CDC14CA4D256 554 aa7.09□□□□□ -1.27
ATXN3-241ENST00000556374 GSK3AP49840 483 aa7.09□□□□□ -1.27
ATXN3-241ENST00000556374 LBRQ14739 615 aaKnown RBP7.09□□□□□ -1.27
ATXN3-241ENST00000556374 OSBPL3Q9H4L5 887 aa7.09□□□□□ -1.27
ATXN3-241ENST00000556374 SNRKQ9NRH2 765 aa7.09□□□□□ -1.27
ATXN3-241ENST00000556374 PCDHB11Q9Y5F2 797 aa7.09□□□□□ -1.27
ATXN3-241ENST00000556374 ARHGEF15O94989 841 aa7.08□□□□□ -1.28
ATXN3-241ENST00000556374 MYCP01106 439 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-241ENST00000556374 SOX11P35716 441 aa7.08□□□□□ -1.28
ATXN3-241ENST00000556374 RASSF7Q02833 373 aa7.08□□□□□ -1.28
ATXN3-241ENST00000556374 USP4Q13107 963 aa7.08□□□□□ -1.28
ATXN3-241ENST00000556374 WASHC4Q2M389 1173 aa7.08□□□□□ -1.28
ATXN3-241ENST00000556374 TPRNQ4KMQ1 711 aa7.08□□□□□ -1.28
ATXN3-241ENST00000556374 ESCO1Q5FWF5 840 aa7.08□□□□□ -1.28
ATXN3-241ENST00000556374 ZNF385CQ66K41 422 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms