RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 GRM1Q13255 1194 aa12.65□□□□□ -0.38
PSEN1-215ENST00000556011 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.65□□□□□ -0.38
PSEN1-215ENST00000556011 COL18A1P39060 1754 aa12.65□□□□□ -0.38
PSEN1-215ENST00000556011 FCHSD2O94868 740 aa12.64□□□□□ -0.39
PSEN1-215ENST00000556011 ZC3H6P61129 1189 aaKnown RBP12.64□□□□□ -0.39
PSEN1-215ENST00000556011 ACSBG1Q96GR2 724 aa12.64□□□□□ -0.39
PSEN1-215ENST00000556011 TRPM3Q9HCF6 1732 aaPredicted RBP12.63□□□□□ -0.39
PSEN1-215ENST00000556011 CAPNS2Q96L46 248 aa12.63□□□□□ -0.39
PSEN1-215ENST00000556011 QRICH2Q9H0J4 1663 aa12.63□□□□□ -0.39
PSEN1-215ENST00000556011 ARFGEF1Q9Y6D6 1849 aa12.62□□□□□ -0.39
PSEN1-215ENST00000556011 CA12O43570 354 aa12.62□□□□□ -0.39
PSEN1-215ENST00000556011 OTUD5Q96G74 571 aa12.62□□□□□ -0.39
PSEN1-215ENST00000556011 TRPM1Q7Z4N2 1603 aa12.62□□□□□ -0.39
PSEN1-215ENST00000556011 A0A0G2JLW4 131 aa12.61□□□□□ -0.39
PSEN1-215ENST00000556011 IGSF5Q9NSI5 407 aa12.61□□□□□ -0.39
PSEN1-215ENST00000556011 SYNGAP1Q96PV0 1343 aa12.61□□□□□ -0.39
PSEN1-215ENST00000556011 BRCA1P38398 1863 aaKnown RBP12.6□□□□□ -0.39
PSEN1-215ENST00000556011 PAXIP1Q6ZW49 1069 aaPredicted RBP12.6□□□□□ -0.39
PSEN1-215ENST00000556011 SMIM5Q71RC9 77 aa12.6□□□□□ -0.39
PSEN1-215ENST00000556011 ABT1Q9ULW3 272 aaKnown RBP12.6□□□□□ -0.39
PSEN1-215ENST00000556011 HPS5Q9UPZ3 1129 aa12.6□□□□□ -0.39
PSEN1-215ENST00000556011 NRXN1Q9ULB1 1477 aa12.59□□□□□ -0.39
PSEN1-215ENST00000556011 EYSQ5T1H1 3165 aa12.59□□□□□ -0.39
PSEN1-215ENST00000556011 CENPFP49454 3210 aa12.59□□□□□ -0.39
PSEN1-215ENST00000556011 AOC2O75106 756 aa12.59□□□□□ -0.39
PSEN1-215ENST00000556011 SLC27A3Q5K4L6 730 aa12.59□□□□□ -0.39
PSEN1-215ENST00000556011 ITGBL1O95965 494 aaPredicted RBP12.58□□□□□ -0.4
PSEN1-215ENST00000556011 CYP4F22Q6NT55 531 aa12.58□□□□□ -0.4
PSEN1-215ENST00000556011 IQGAP3Q86VI3 1631 aa12.57□□□□□ -0.4
PSEN1-215ENST00000556011 WNK3Q9BYP7 1800 aa12.56□□□□□ -0.4
PSEN1-215ENST00000556011 ZC3H4Q9UPT8 1303 aaKnown RBP12.56□□□□□ -0.4
PSEN1-215ENST00000556011 PRUNE2Q8WUY3 3088 aa12.56□□□□□ -0.4
PSEN1-215ENST00000556011 KIF13BQ9NQT8 1826 aa12.55□□□□□ -0.4
PSEN1-215ENST00000556011 USP6P35125 1406 aa12.55□□□□□ -0.4
PSEN1-215ENST00000556011 ECE1P42892 770 aa12.55□□□□□ -0.4
PSEN1-215ENST00000556011 MAP3K12Q12852 859 aa12.55□□□□□ -0.4
PSEN1-215ENST00000556011 CHRDL2Q6WN34 429 aa12.55□□□□□ -0.4
PSEN1-215ENST00000556011 CHD8Q9HCK8 2581 aa12.55□□□□□ -0.4
PSEN1-215ENST00000556011 CASKIN1Q8WXD9 1431 aa12.54□□□□□ -0.4
PSEN1-215ENST00000556011 TMEM265A0A087WTH1 108 aa12.54□□□□□ -0.4
PSEN1-215ENST00000556011 RBM27Q9P2N5 1060 aaKnown RBP12.54□□□□□ -0.4
PSEN1-215ENST00000556011 CCDC88AQ3V6T2 1871 aa12.53□□□□□ -0.4
PSEN1-215ENST00000556011 LMO7Q8WWI1 1683 aa12.53□□□□□ -0.4
PSEN1-215ENST00000556011 TIAM2Q8IVF5 1701 aa12.53□□□□□ -0.4
PSEN1-215ENST00000556011 MAP2K2P36507 400 aa12.52□□□□□ -0.41
PSEN1-215ENST00000556011 CSRNP3Q8WYN3 585 aa12.52□□□□□ -0.41
PSEN1-215ENST00000556011 CRB1P82279 1406 aa12.52□□□□□ -0.41
PSEN1-215ENST00000556011 ERBINQ96RT1 1412 aa12.52□□□□□ -0.41
PSEN1-215ENST00000556011 STXBP5LQ9Y2K9 1186 aa12.51□□□□□ -0.41
PSEN1-215ENST00000556011 USP54Q70EL1 1684 aa12.51□□□□□ -0.41
PSEN1-215ENST00000556011 H0YGN5 161 aa12.5□□□□□ -0.41
PSEN1-215ENST00000556011 DPEP1P16444 411 aa12.5□□□□□ -0.41
PSEN1-215ENST00000556011 TGFB2P61812 414 aa12.5□□□□□ -0.41
PSEN1-215ENST00000556011 CLTCL1P53675 1640 aa12.49□□□□□ -0.41
PSEN1-215ENST00000556011 ANKRD30BQ9BXX2 1392 aa12.49□□□□□ -0.41
PSEN1-215ENST00000556011 ALYREFQ86V81 257 aaKnown RBP12.49□□□□□ -0.41
PSEN1-215ENST00000556011 LRCH3Q96II8 777 aa12.49□□□□□ -0.41
PSEN1-215ENST00000556011 DCAF5Q96JK2 942 aa12.49□□□□□ -0.41
PSEN1-215ENST00000556011 COL5A2P05997 1499 aaPredicted RBP12.48□□□□□ -0.41
PSEN1-215ENST00000556011 SOX1O00570 391 aaPredicted RBP12.48□□□□□ -0.41
PSEN1-215ENST00000556011 RASSF7Q02833 373 aa12.48□□□□□ -0.41
PSEN1-215ENST00000556011 WAPLQ7Z5K2 1190 aa12.48□□□□□ -0.41
PSEN1-215ENST00000556011 KDM6AO15550 1401 aaPredicted RBP12.47□□□□□ -0.41
PSEN1-215ENST00000556011 CTU1Q7Z7A3 348 aaKnown RBP12.47□□□□□ -0.41
PSEN1-215ENST00000556011 LDHDQ86WU2 507 aa12.47□□□□□ -0.41
PSEN1-215ENST00000556011 BRPF1P55201 1214 aaPredicted RBP12.45□□□□□ -0.42
PSEN1-215ENST00000556011 CIAPIN1Q6FI81 312 aa12.45□□□□□ -0.42
PSEN1-215ENST00000556011 CACNA1BQ00975 2339 aa12.45□□□□□ -0.42
PSEN1-215ENST00000556011 RRP7BPQ9NSQ0 103 aa12.44□□□□□ -0.42
PSEN1-215ENST00000556011 IFT172Q9UG01 1749 aa12.44□□□□□ -0.42
PSEN1-215ENST00000556011 KIAA0100Q14667 2235 aaKnown RBP12.43□□□□□ -0.42
PSEN1-215ENST00000556011 ERBB3P21860 1342 aa12.43□□□□□ -0.42
PSEN1-215ENST00000556011 MINK1Q8N4C8 1332 aaPredicted RBP12.43□□□□□ -0.42
PSEN1-215ENST00000556011 LY75O60449 1722 aa12.43□□□□□ -0.42
PSEN1-215ENST00000556011 ITSN1Q15811 1721 aa12.43□□□□□ -0.42
PSEN1-215ENST00000556011 EXOC5O00471 708 aa12.43□□□□□ -0.42
PSEN1-215ENST00000556011 PAK3O75914 559 aaPredicted RBP12.43□□□□□ -0.42
PSEN1-215ENST00000556011 ZNF326Q5BKZ1 582 aaKnown RBP12.43□□□□□ -0.42
PSEN1-215ENST00000556011 DPY19L2Q6NUT2 758 aa12.43□□□□□ -0.42
PSEN1-215ENST00000556011 P2RX7Q99572 595 aaKnown RBP12.43□□□□□ -0.42
PSEN1-215ENST00000556011 EEA1Q15075 1411 aa12.43□□□□□ -0.42
PSEN1-215ENST00000556011 POTEFA5A3E0 1075 aa12.42□□□□□ -0.42
PSEN1-215ENST00000556011 LMNB1P20700 586 aa12.42□□□□□ -0.42
PSEN1-215ENST00000556011 KCNA3P22001 575 aa12.42□□□□□ -0.42
PSEN1-215ENST00000556011 MUC6Q6W4X9 2439 aa12.42□□□□□ -0.42
PSEN1-215ENST00000556011 TRANK1O15050 2925 aa12.4□□□□□ -0.42
PSEN1-215ENST00000556011 ANKRD13DQ6ZTN6 518 aa12.4□□□□□ -0.42
PSEN1-215ENST00000556011 DEFB123Q8N688 67 aa12.4□□□□□ -0.42
PSEN1-215ENST00000556011 CDCA7Q9BWT1 371 aaPredicted RBP12.4□□□□□ -0.42
PSEN1-215ENST00000556011 PAPPA2Q9BXP8 1791 aa12.4□□□□□ -0.42
PSEN1-215ENST00000556011 HTTP42858 3142 aa12.4□□□□□ -0.43
PSEN1-215ENST00000556011 DALRD3Q5D0E6 543 aaKnown RBP12.39□□□□□ -0.43
PSEN1-215ENST00000556011 NUTM2GQ5VZR2 741 aa12.39□□□□□ -0.43
PSEN1-215ENST00000556011 TOM1L2Q6ZVM7 507 aa12.39□□□□□ -0.43
PSEN1-215ENST00000556011 Q7L0L9 218 aa12.39□□□□□ -0.43
PSEN1-215ENST00000556011 GPRASP1Q5JY77 1395 aa12.39□□□□□ -0.43
PSEN1-215ENST00000556011 PLEKHH1Q9ULM0 1364 aa12.39□□□□□ -0.43
PSEN1-215ENST00000556011 SETXQ7Z333 2677 aaKnown RBP12.39□□□□□ -0.43
PSEN1-215ENST00000556011 FLAD1Q8NFF5 587 aa12.38□□□□□ -0.43
PSEN1-215ENST00000556011 PIM2Q9P1W9 311 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms