RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 LCE3BQ5TA77 95 aa8.89□□□□□ -0.99
SNRPF-202ENST00000549580 OIP5O43482 229 aa8.88□□□□□ -0.99
SNRPF-202ENST00000549580 ITGB7P26010 798 aa8.88□□□□□ -0.99
SNRPF-202ENST00000549580 ALYREFQ86V81 257 aaKnown RBP8.88□□□□□ -0.99
SNRPF-202ENST00000549580 PTGIRP43119 386 aa8.87□□□□□ -0.99
SNRPF-202ENST00000549580 CTDSPL2Q05D32 466 aa8.87□□□□□ -0.99
SNRPF-202ENST00000549580 PDXDC2PQ6P474 469 aa8.87□□□□□ -0.99
SNRPF-202ENST00000549580 ZNF784Q8NCA9 323 aaPredicted RBP8.87□□□□□ -0.99
SNRPF-202ENST00000549580 ARHGAP9Q9BRR9 750 aa8.87□□□□□ -0.99
SNRPF-202ENST00000549580 TMPRSS4Q9NRS4 437 aa8.87□□□□□ -0.99
SNRPF-202ENST00000549580 LILRA1O75019 489 aa8.86□□□□□ -0.99
SNRPF-202ENST00000549580 ADD1P35611 737 aaKnown RBP8.86□□□□□ -0.99
SNRPF-202ENST00000549580 TUSC1Q2TAM9 212 aa8.86□□□□□ -0.99
SNRPF-202ENST00000549580 FOXR1Q6PIV2 292 aa8.86□□□□□ -0.99
SNRPF-202ENST00000549580 RHOQP17081 205 aa8.85□□□□□ -0.99
SNRPF-202ENST00000549580 HELBQ8NG08 1087 aaPredicted RBP8.85□□□□□ -0.99
SNRPF-202ENST00000549580 OCSTAMPQ9BR26 566 aa8.85□□□□□ -0.99
SNRPF-202ENST00000549580 RNF144AP50876 292 aaPredicted RBP8.84□□□□□ -0.99
SNRPF-202ENST00000549580 PRICKLE2Q7Z3G6 844 aa8.84□□□□□ -0.99
SNRPF-202ENST00000549580 LRRN4Q8WUT4 740 aa8.84□□□□□ -0.99
SNRPF-202ENST00000549580 GTPBP3Q969Y2 492 aaKnown RBP8.84□□□□□ -0.99
SNRPF-202ENST00000549580 POLR3EQ9NVU0 708 aa8.84□□□□□ -0.99
SNRPF-202ENST00000549580 SHISA8B8ZZ34 492 aa8.83□□□□□ -1
SNRPF-202ENST00000549580 AK7Q96M32 723 aa8.83□□□□□ -1
SNRPF-202ENST00000549580 MKL2Q9ULH7 1088 aa8.83□□□□□ -1
SNRPF-202ENST00000549580 FBXO31Q5XUX0 539 aaPredicted RBP8.82□□□□□ -1
SNRPF-202ENST00000549580 MX2P20592 715 aa8.81□□□□□ -1
SNRPF-202ENST00000549580 RIPOR1Q6ZS17 1223 aa8.81□□□□□ -1
SNRPF-202ENST00000549580 FKBPLQ9UIM3 349 aa8.81□□□□□ -1
SNRPF-202ENST00000549580 CLK2P49760 499 aaKnown RBP8.8□□□□□ -1
SNRPF-202ENST00000549580 RAB15P59190 212 aa8.8□□□□□ -1
SNRPF-202ENST00000549580 PDE4DQ08499 809 aa8.8□□□□□ -1
SNRPF-202ENST00000549580 C1orf229Q6ZS94 237 aaPredicted RBP8.8□□□□□ -1
SNRPF-202ENST00000549580 ZBTB33Q86T24 672 aa8.8□□□□□ -1
SNRPF-202ENST00000549580 TRERF1Q96PN7 1200 aa8.8□□□□□ -1
SNRPF-202ENST00000549580 OXCT2Q9BYC2 517 aaPredicted RBP8.8□□□□□ -1
SNRPF-202ENST00000549580 DYRK1BQ9Y463 629 aa8.8□□□□□ -1
SNRPF-202ENST00000549580 H7C1W4 665 aa8.79□□□□□ -1
SNRPF-202ENST00000549580 HOXB4P17483 251 aaPredicted RBP8.79□□□□□ -1
SNRPF-202ENST00000549580 NR6A1Q15406 480 aa8.79□□□□□ -1
SNRPF-202ENST00000549580 NSFL1CQ9UNZ2 370 aaKnown RBP8.79□□□□□ -1
SNRPF-202ENST00000549580 ERVH48-1M5A8F1 160 aa8.78□□□□□ -1
SNRPF-202ENST00000549580 MAP2K3P46734 347 aa8.77□□□□□ -1.01
SNRPF-202ENST00000549580 NBPF20Q3BBV1 942 aa8.77□□□□□ -1.01
SNRPF-202ENST00000549580 KRTAP9-9Q9BYP9 154 aa8.77□□□□□ -1.01
SNRPF-202ENST00000549580 KRTAP9-4Q9BYQ2 154 aa8.77□□□□□ -1.01
SNRPF-202ENST00000549580 SUV39H2Q9H5I1 410 aa8.77□□□□□ -1.01
SNRPF-202ENST00000549580 ZC3H4Q9UPT8 1303 aaKnown RBP8.77□□□□□ -1.01
SNRPF-202ENST00000549580 C1QTNF9BB2RNN3 333 aa8.76□□□□□ -1.01
SNRPF-202ENST00000549580 GPC1P35052 558 aa8.76□□□□□ -1.01
SNRPF-202ENST00000549580 LINC00114Q6XXX2 140 aa8.76□□□□□ -1.01
SNRPF-202ENST00000549580 GRIN2CQ14957 1233 aa8.75□□□□□ -1.01
SNRPF-202ENST00000549580 CD163Q86VB7 1156 aa8.75□□□□□ -1.01
SNRPF-202ENST00000549580 ADAM32Q8TC27 787 aa8.75□□□□□ -1.01
SNRPF-202ENST00000549580 ESPNB1AK53 854 aa8.74□□□□□ -1.01
SNRPF-202ENST00000549580 EPS8L1Q8TE68 723 aa8.74□□□□□ -1.01
SNRPF-202ENST00000549580 GAS2L1Q99501 681 aaPredicted RBP8.74□□□□□ -1.01
SNRPF-202ENST00000549580 GPSM3Q9Y4H4 160 aa8.74□□□□□ -1.01
SNRPF-202ENST00000549580 THBS1P07996 1170 aa8.73□□□□□ -1.01
SNRPF-202ENST00000549580 CHRNA4P43681 627 aa8.73□□□□□ -1.01
SNRPF-202ENST00000549580 ZMYM1Q5SVZ6 1142 aa8.73□□□□□ -1.01
SNRPF-202ENST00000549580 PTK2Q05397 1052 aa8.72□□□□□ -1.01
SNRPF-202ENST00000549580 KLRG1Q96E93 195 aa8.72□□□□□ -1.01
SNRPF-202ENST00000549580 SLC24A3Q9HC58 644 aa8.72□□□□□ -1.01
SNRPF-202ENST00000549580 POU4F2Q12837 409 aa8.71□□□□□ -1.02
SNRPF-202ENST00000549580 EDARADDQ8WWZ3 215 aa8.71□□□□□ -1.02
SNRPF-202ENST00000549580 NUCKS1Q9H1E3 243 aaKnown RBP8.71□□□□□ -1.02
SNRPF-202ENST00000549580 SEMA6BQ9H3T3 888 aa8.71□□□□□ -1.02
SNRPF-202ENST00000549580 RRAGCQ9HB90 399 aa8.71□□□□□ -1.02
SNRPF-202ENST00000549580 TMEM132AQ24JP5 1023 aa8.7□□□□□ -1.02
SNRPF-202ENST00000549580 PROCA1Q8NCQ7 364 aaPredicted RBP8.7□□□□□ -1.02
SNRPF-202ENST00000549580 CFHR5Q9BXR6 569 aa8.7□□□□□ -1.02
SNRPF-202ENST00000549580 CYLDQ9NQC7 956 aa8.7□□□□□ -1.02
SNRPF-202ENST00000549580 GDF2Q9UK05 429 aaPredicted RBP8.7□□□□□ -1.02
SNRPF-202ENST00000549580 ATP5J2-PTCD1G3V325 749 aa8.69□□□□□ -1.02
SNRPF-202ENST00000549580 FOXD4L6Q3SYB3 417 aaPredicted RBP8.69□□□□□ -1.02
SNRPF-202ENST00000549580 NBPF10Q6P3W6 841 aaKnown RBP8.69□□□□□ -1.02
SNRPF-202ENST00000549580 FOXD4L3Q6VB84 417 aaPredicted RBP8.69□□□□□ -1.02
SNRPF-202ENST00000549580 NBPF15Q8N660 670 aa8.69□□□□□ -1.02
SNRPF-202ENST00000549580 KRTAP4-8A0A0G2JLE6 195 aa8.67□□□□□ -1.02
SNRPF-202ENST00000549580 A0A1W2PRU2 124 aa8.67□□□□□ -1.02
SNRPF-202ENST00000549580 SPATA31C2B4DYI2 1134 aa8.67□□□□□ -1.02
SNRPF-202ENST00000549580 MEN1O00255 615 aa8.67□□□□□ -1.02
SNRPF-202ENST00000549580 GNB5O14775 395 aa8.67□□□□□ -1.02
SNRPF-202ENST00000549580 DOC2BQ14184 412 aa8.67□□□□□ -1.02
SNRPF-202ENST00000549580 PPP2R2DQ66LE6 453 aa8.67□□□□□ -1.02
SNRPF-202ENST00000549580 KRTAP19-1Q8IUB9 90 aa8.67□□□□□ -1.02
SNRPF-202ENST00000549580 GRIP2Q9C0E4 1043 aa8.67□□□□□ -1.02
SNRPF-202ENST00000549580 RSPH6AQ9H0K4 717 aa8.67□□□□□ -1.02
SNRPF-202ENST00000549580 HMX1Q9NP08 348 aaPredicted RBP8.67□□□□□ -1.02
SNRPF-202ENST00000549580 F11P03951 625 aa8.66□□□□□ -1.02
SNRPF-202ENST00000549580 WDR44Q5JSH3 913 aa8.66□□□□□ -1.02
SNRPF-202ENST00000549580 DZIP3Q86Y13 1208 aaKnown RBP8.66□□□□□ -1.02
SNRPF-202ENST00000549580 GOLGA6L1Q8N7Z2 621 aa8.66□□□□□ -1.02
SNRPF-202ENST00000549580 GTF3C3Q9Y5Q9 886 aa8.66□□□□□ -1.02
SNRPF-202ENST00000549580 AP1G2O75843 785 aa8.65□□□□□ -1.02
SNRPF-202ENST00000549580 UBAP2LQ14157 1087 aaKnown RBP8.65□□□□□ -1.02
SNRPF-202ENST00000549580 SEPT12Q8IYM1 358 aa8.65□□□□□ -1.02
SNRPF-202ENST00000549580 BTBD11A6QL63 1104 aa8.64□□□□□ -1.03
SNRPF-202ENST00000549580 DGKGP49619 791 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms