RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 SLURP2P0DP57 97 aa9.62□□□□□ -0.87
CCDC38-206ENST00000548771 ITGA6P23229 1130 aa9.62□□□□□ -0.87
CCDC38-206ENST00000548771 MCCD1P59942 119 aaPredicted RBP9.62□□□□□ -0.87
CCDC38-206ENST00000548771 PCDHB9Q9Y5E1 797 aa9.62□□□□□ -0.87
CCDC38-206ENST00000548771 ADH1AP07327 375 aa9.61□□□□□ -0.87
CCDC38-206ENST00000548771 CCDC125Q86Z20 511 aa9.61□□□□□ -0.87
CCDC38-206ENST00000548771 INSM2Q96T92 566 aaPredicted RBP9.61□□□□□ -0.87
CCDC38-206ENST00000548771 RAB15P59190 212 aa9.6□□□□□ -0.87
CCDC38-206ENST00000548771 RELBQ01201 579 aa9.6□□□□□ -0.87
CCDC38-206ENST00000548771 APBB1O00213 710 aa9.59□□□□□ -0.87
CCDC38-206ENST00000548771 PTGIRP43119 386 aa9.59□□□□□ -0.87
CCDC38-206ENST00000548771 SENP3-EIF4A1A0A087X0R7 540 aa9.58□□□□□ -0.88
CCDC38-206ENST00000548771 MARSP56192 900 aaKnown RBP9.58□□□□□ -0.88
CCDC38-206ENST00000548771 IRF5Q13568 498 aa9.58□□□□□ -0.88
CCDC38-206ENST00000548771 LYPD4Q6UWN0 246 aa9.58□□□□□ -0.88
CCDC38-206ENST00000548771 SV2AQ7L0J3 742 aa9.58□□□□□ -0.88
CCDC38-206ENST00000548771 TBC1D2BQ9UPU7 963 aa9.58□□□□□ -0.88
CCDC38-206ENST00000548771 DNMT3AQ9Y6K1 912 aaPredicted RBP9.58□□□□□ -0.88
CCDC38-206ENST00000548771 ERVK-9P63128 1117 aa9.57□□□□□ -0.88
CCDC38-206ENST00000548771 ZNF395Q9H8N7 513 aaPredicted RBP9.57□□□□□ -0.88
CCDC38-206ENST00000548771 ADAMTS2O95450 1211 aa9.56□□□□□ -0.88
CCDC38-206ENST00000548771 FOXD4L5Q5VV16 416 aaPredicted RBP9.56□□□□□ -0.88
CCDC38-206ENST00000548771 RNF217Q8TC41 542 aa9.56□□□□□ -0.88
CCDC38-206ENST00000548771 RNF20Q5VTR2 975 aa9.55□□□□□ -0.88
CCDC38-206ENST00000548771 ZNF592Q92610 1267 aa9.55□□□□□ -0.88
CCDC38-206ENST00000548771 POLMQ9NP87 494 aaPredicted RBP9.55□□□□□ -0.88
CCDC38-206ENST00000548771 CYLDQ9NQC7 956 aa9.55□□□□□ -0.88
CCDC38-206ENST00000548771 CUEDC1Q9NWM3 386 aaPredicted RBP9.55□□□□□ -0.88
CCDC38-206ENST00000548771 ZNF330Q9Y3S2 320 aaPredicted RBP9.55□□□□□ -0.88
CCDC38-206ENST00000548771 CEP126Q9P2H0 1117 aa9.54□□□□□ -0.88
CCDC38-206ENST00000548771 TRAK2O60296 914 aa9.53□□□□□ -0.88
CCDC38-206ENST00000548771 RNF144AP50876 292 aaPredicted RBP9.52□□□□□ -0.89
CCDC38-206ENST00000548771 GAS6Q14393 721 aa9.52□□□□□ -0.89
CCDC38-206ENST00000548771 CC2D2BQ6DHV5 1058 aa9.52□□□□□ -0.89
CCDC38-206ENST00000548771 PHTF2Q8N3S3 785 aa9.52□□□□□ -0.89
CCDC38-206ENST00000548771 TRIM52Q96A61 297 aa9.52□□□□□ -0.89
CCDC38-206ENST00000548771 SCTRP47872 440 aa9.51□□□□□ -0.89
CCDC38-206ENST00000548771 KANK3Q6NY19 840 aa9.51□□□□□ -0.89
CCDC38-206ENST00000548771 ATP5J2-PTCD1G3V325 749 aa9.5□□□□□ -0.89
CCDC38-206ENST00000548771 IGHA1P01876 353 aa9.5□□□□□ -0.89
CCDC38-206ENST00000548771 CELA2BP08218 269 aaPredicted RBP9.5□□□□□ -0.89
CCDC38-206ENST00000548771 MCM6Q14566 821 aa9.5□□□□□ -0.89
CCDC38-206ENST00000548771 SCARF2Q96GP6 870 aaPredicted RBP9.5□□□□□ -0.89
CCDC38-206ENST00000548771 CCDC85AQ96PX6 553 aaPredicted RBP9.5□□□□□ -0.89
CCDC38-206ENST00000548771 OSBPL3Q9H4L5 887 aa9.5□□□□□ -0.89
CCDC38-206ENST00000548771 CHIC2Q9UKJ5 165 aa9.5□□□□□ -0.89
CCDC38-206ENST00000548771 A0A1W2PRU2 124 aa9.48□□□□□ -0.89
CCDC38-206ENST00000548771 ITGB2P05107 769 aa9.48□□□□□ -0.89
CCDC38-206ENST00000548771 GPC1P35052 558 aa9.48□□□□□ -0.89
CCDC38-206ENST00000548771 XP32Q5T750 250 aa9.48□□□□□ -0.89
CCDC38-206ENST00000548771 CDCA7Q9BWT1 371 aaPredicted RBP9.48□□□□□ -0.89
CCDC38-206ENST00000548771 GDPD2Q9HCC8 539 aa9.48□□□□□ -0.89
CCDC38-206ENST00000548771 PRM3Q9NNZ6 103 aa9.48□□□□□ -0.89
CCDC38-206ENST00000548771 PCDHB11Q9Y5F2 797 aa9.48□□□□□ -0.89
CCDC38-206ENST00000548771 CNTNAP5Q8WYK1 1306 aa9.48□□□□□ -0.89
CCDC38-206ENST00000548771 TSGA10IPQ3SY00 556 aa9.47□□□□□ -0.89
CCDC38-206ENST00000548771 EIF4G2P78344 907 aaKnown RBP eCLIP9.46□□□□□ -0.9
CCDC38-206ENST00000548771 SRSF11Q05519 484 aaKnown RBP9.46□□□□□ -0.9
CCDC38-206ENST00000548771 LYSMD3Q7Z3D4 306 aa9.46□□□□□ -0.9
CCDC38-206ENST00000548771 GPR25O00155 361 aa9.45□□□□□ -0.9
CCDC38-206ENST00000548771 RHOQP17081 205 aa9.45□□□□□ -0.9
CCDC38-206ENST00000548771 FOXK2Q01167 660 aa9.45□□□□□ -0.9
CCDC38-206ENST00000548771 MAP3K10Q02779 954 aa9.45□□□□□ -0.9
CCDC38-206ENST00000548771 CLN3Q13286 438 aa9.45□□□□□ -0.9
CCDC38-206ENST00000548771 PLA2G4EQ3MJ16 856 aa9.45□□□□□ -0.9
CCDC38-206ENST00000548771 GRIP2Q9C0E4 1043 aa9.45□□□□□ -0.9
CCDC38-206ENST00000548771 VAC14Q08AM6 782 aa9.44□□□□□ -0.9
CCDC38-206ENST00000548771 CYP2U1Q7Z449 544 aa9.44□□□□□ -0.9
CCDC38-206ENST00000548771 HRH3Q9Y5N1 445 aa9.44□□□□□ -0.9
CCDC38-206ENST00000548771 PRICKLE2Q7Z3G6 844 aa9.43□□□□□ -0.9
CCDC38-206ENST00000548771 DCAF5Q96JK2 942 aa9.43□□□□□ -0.9
CCDC38-206ENST00000548771 COG6Q9Y2V7 657 aa9.43□□□□□ -0.9
CCDC38-206ENST00000548771 ADAM23O75077 832 aa9.42□□□□□ -0.9
CCDC38-206ENST00000548771 WASHC4Q2M389 1173 aa9.42□□□□□ -0.9
CCDC38-206ENST00000548771 SPOCK3Q9BQ16 436 aa9.42□□□□□ -0.9
CCDC38-206ENST00000548771 SPATA31C2B4DYI2 1134 aa9.41□□□□□ -0.9
CCDC38-206ENST00000548771 MSTNO14793 375 aa9.41□□□□□ -0.9
CCDC38-206ENST00000548771 GNRH1P01148 92 aa9.41□□□□□ -0.9
CCDC38-206ENST00000548771 ABL2P42684 1182 aa9.41□□□□□ -0.9
CCDC38-206ENST00000548771 ZNF837Q96EG3 531 aaPredicted RBP9.41□□□□□ -0.9
CCDC38-206ENST00000548771 MEN1O00255 615 aa9.4□□□□□ -0.9
CCDC38-206ENST00000548771 ARHGEF10LQ9HCE6 1279 aa9.4□□□□□ -0.9
CCDC38-206ENST00000548771 IGF1RP08069 1367 aa9.39□□□□□ -0.91
CCDC38-206ENST00000548771 IL2RAP01589 272 aa9.39□□□□□ -0.91
CCDC38-206ENST00000548771 XAGE2Q96GT9 111 aa9.39□□□□□ -0.91
CCDC38-206ENST00000548771 ESYT1Q9BSJ8 1104 aa9.39□□□□□ -0.91
CCDC38-206ENST00000548771 DBN1Q16643 649 aa9.38□□□□□ -0.91
CCDC38-206ENST00000548771 WDR44Q5JSH3 913 aa9.38□□□□□ -0.91
CCDC38-206ENST00000548771 PROCP04070 461 aa9.37□□□□□ -0.91
CCDC38-206ENST00000548771 SOX11P35716 441 aa9.37□□□□□ -0.91
CCDC38-206ENST00000548771 CENPCQ03188 943 aa9.37□□□□□ -0.91
CCDC38-206ENST00000548771 POU4F2Q12837 409 aa9.37□□□□□ -0.91
CCDC38-206ENST00000548771 USP4Q13107 963 aa9.37□□□□□ -0.91
CCDC38-206ENST00000548771 SLFNL1Q499Z3 407 aa9.37□□□□□ -0.91
CCDC38-206ENST00000548771 CNKSR1Q969H4 720 aa9.37□□□□□ -0.91
CCDC38-206ENST00000548771 ACDQ96AP0 544 aa9.37□□□□□ -0.91
CCDC38-206ENST00000548771 NLRP3Q96P20 1036 aa9.37□□□□□ -0.91
CCDC38-206ENST00000548771 ENAMQ9NRM1 1142 aa9.37□□□□□ -0.91
CCDC38-206ENST00000548771 MBIPQ9NS73 344 aa9.37□□□□□ -0.91
CCDC38-206ENST00000548771 DYRK1BQ9Y463 629 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms