RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 ZFYVE9O95405 1425 aa15.34■□□□□ 0.05
RFC5-209ENST00000543153 NUTM2DQ5VT03 806 aaPredicted RBP15.34■□□□□ 0.05
RFC5-209ENST00000543153 ROBO1Q9Y6N7 1651 aa15.34■□□□□ 0.05
RFC5-209ENST00000543153 ROCK1Q13464 1354 aa15.34■□□□□ 0.05
RFC5-209ENST00000543153 PPARGC1BQ86YN6 1023 aaKnown RBP15.33■□□□□ 0.04
RFC5-209ENST00000543153 NUP155O75694 1391 aa15.33■□□□□ 0.04
RFC5-209ENST00000543153 SKIV2LQ15477 1246 aaKnown RBP15.32■□□□□ 0.04
RFC5-209ENST00000543153 NECTIN2Q92692 538 aa15.32■□□□□ 0.04
RFC5-209ENST00000543153 LRCH3Q96II8 777 aa15.32■□□□□ 0.04
RFC5-209ENST00000543153 TBC1D2Q9BYX2 928 aa15.32■□□□□ 0.04
RFC5-209ENST00000543153 TMEM131LA2VDJ0 1609 aa15.32■□□□□ 0.04
RFC5-209ENST00000543153 RNF40O75150 1001 aa15.31■□□□□ 0.04
RFC5-209ENST00000543153 POTEGQ6S5H5 508 aa15.3■□□□□ 0.04
RFC5-209ENST00000543153 ANKK1Q8NFD2 765 aa15.3■□□□□ 0.04
RFC5-209ENST00000543153 SLAIN2Q9P270 581 aa15.3■□□□□ 0.04
RFC5-209ENST00000543153 E9PCH4 1651 aa15.29■□□□□ 0.04
RFC5-209ENST00000543153 IQGAP3Q86VI3 1631 aa15.29■□□□□ 0.04
RFC5-209ENST00000543153 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.29■□□□□ 0.04
RFC5-209ENST00000543153 MYO5BQ9ULV0 1848 aa15.29■□□□□ 0.04
RFC5-209ENST00000543153 MYSM1Q5VVJ2 828 aa15.28■□□□□ 0.04
RFC5-209ENST00000543153 SPIRE2Q8WWL2 714 aa15.28■□□□□ 0.04
RFC5-209ENST00000543153 TBX22Q9Y458 520 aa15.28■□□□□ 0.04
RFC5-209ENST00000543153 SLC10A3P09131 477 aa15.27■□□□□ 0.04
RFC5-209ENST00000543153 GCGRP47871 477 aa15.27■□□□□ 0.04
RFC5-209ENST00000543153 KRTAP3-3Q9BYR6 98 aa15.27■□□□□ 0.04
RFC5-209ENST00000543153 KRTAP3-2Q9BYR7 98 aa15.27■□□□□ 0.04
RFC5-209ENST00000543153 POLR3EQ9NVU0 708 aa15.27■□□□□ 0.04
RFC5-209ENST00000543153 DIP2AQ14689 1571 aa15.27■□□□□ 0.03
RFC5-209ENST00000543153 POTEMA6NI47 508 aa15.26■□□□□ 0.03
RFC5-209ENST00000543153 KDM4AO75164 1064 aa15.26■□□□□ 0.03
RFC5-209ENST00000543153 ATF3P18847 181 aa15.26■□□□□ 0.03
RFC5-209ENST00000543153 ZNF326Q5BKZ1 582 aaKnown RBP15.26■□□□□ 0.03
RFC5-209ENST00000543153 ERICH6Q7L0X2 663 aa15.26■□□□□ 0.03
RFC5-209ENST00000543153 USP46P62068 366 aa15.25■□□□□ 0.03
RFC5-209ENST00000543153 PHLPP1O60346 1717 aa15.25■□□□□ 0.03
RFC5-209ENST00000543153 JCADQ9P266 1359 aa15.24■□□□□ 0.03
RFC5-209ENST00000543153 TRPM2O94759 1503 aa15.24■□□□□ 0.03
RFC5-209ENST00000543153 CDAN1Q8IWY9 1227 aa15.24■□□□□ 0.03
RFC5-209ENST00000543153 RGS17Q9UGC6 210 aaPredicted RBP15.24■□□□□ 0.03
RFC5-209ENST00000543153 ADAMTS13Q76LX8 1427 aa15.24■□□□□ 0.03
RFC5-209ENST00000543153 CHD2O14647 1828 aaKnown RBP15.24■□□□□ 0.03
RFC5-209ENST00000543153 CLK2P49760 499 aaKnown RBP15.23■□□□□ 0.03
RFC5-209ENST00000543153 MEX3CQ5U5Q3 659 aaKnown RBP15.23■□□□□ 0.03
RFC5-209ENST00000543153 WNT2BQ93097 391 aa15.23■□□□□ 0.03
RFC5-209ENST00000543153 NCOA3Q9Y6Q9 1424 aa15.23■□□□□ 0.03
RFC5-209ENST00000543153 PIK3R4Q99570 1358 aa15.23■□□□□ 0.03
RFC5-209ENST00000543153 KMT5BQ4FZB7 885 aa15.22■□□□□ 0.03
RFC5-209ENST00000543153 AMOTL2Q9Y2J4 779 aa15.22■□□□□ 0.03
RFC5-209ENST00000543153 CFHP08603 1231 aa15.21■□□□□ 0.03
RFC5-209ENST00000543153 GRIPAP1Q4V328 841 aa15.21■□□□□ 0.03
RFC5-209ENST00000543153 RIC3Q7Z5B4 369 aa15.21■□□□□ 0.03
RFC5-209ENST00000543153 C19orf44Q9H6X5 657 aa15.21■□□□□ 0.03
RFC5-209ENST00000543153 SOWAHBA6NEL2 793 aa15.2■□□□□ 0.02
RFC5-209ENST00000543153 POTEAQ6S8J7 498 aa15.2■□□□□ 0.02
RFC5-209ENST00000543153 GJA5P36382 358 aa15.19■□□□□ 0.02
RFC5-209ENST00000543153 PPP4CP60510 307 aa15.19■□□□□ 0.02
RFC5-209ENST00000543153 PRR14Q9BWN1 585 aa15.19■□□□□ 0.02
RFC5-209ENST00000543153 SPHKAPQ2M3C7 1700 aa15.18■□□□□ 0.02
RFC5-209ENST00000543153 SPTLC1O15269 473 aa15.18■□□□□ 0.02
RFC5-209ENST00000543153 PROCA1Q8NCQ7 364 aaPredicted RBP15.18■□□□□ 0.02
RFC5-209ENST00000543153 MOXD2PA6NHM9 499 aa15.17■□□□□ 0.02
RFC5-209ENST00000543153 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.17■□□□□ 0.02
RFC5-209ENST00000543153 COL16A1Q07092 1604 aaPredicted RBP15.17■□□□□ 0.02
RFC5-209ENST00000543153 RSBN1LQ6PCB5 846 aaPredicted RBP15.16■□□□□ 0.02
RFC5-209ENST00000543153 TSR3Q9UJK0 312 aaKnown RBP15.16■□□□□ 0.02
RFC5-209ENST00000543153 HPS5Q9UPZ3 1129 aa15.16■□□□□ 0.02
RFC5-209ENST00000543153 PTPRUQ92729 1446 aa15.16■□□□□ 0.02
RFC5-209ENST00000543153 SPATA31A6Q5VVP1 1343 aa15.16■□□□□ 0.02
RFC5-209ENST00000543153 TUSC1Q2TAM9 212 aa15.15■□□□□ 0.02
RFC5-209ENST00000543153 TRIM52Q96A61 297 aa15.15■□□□□ 0.02
RFC5-209ENST00000543153 SETBP1Q9Y6X0 1596 aa15.15■□□□□ 0.02
RFC5-209ENST00000543153 NUTM2BA6NNL0 878 aaPredicted RBP15.14■□□□□ 0.01
RFC5-209ENST00000543153 NUTM2EB1AL46 878 aaPredicted RBP15.14■□□□□ 0.01
RFC5-209ENST00000543153 HOXA2O43364 376 aa15.14■□□□□ 0.01
RFC5-209ENST00000543153 BCAMP50895 628 aa15.14■□□□□ 0.01
RFC5-209ENST00000543153 NUTM2AQ8IVF1 878 aaPredicted RBP15.14■□□□□ 0.01
RFC5-209ENST00000543153 DCCP43146 1447 aa15.14■□□□□ 0.01
RFC5-209ENST00000543153 AHDC1Q5TGY3 1603 aaPredicted RBP15.14■□□□□ 0.01
RFC5-209ENST00000543153 NDUFV2P19404 249 aa15.13■□□□□ 0.01
RFC5-209ENST00000543153 BRINP3Q76B58 766 aa15.13■□□□□ 0.01
RFC5-209ENST00000543153 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.13■□□□□ 0.01
RFC5-209ENST00000543153 LIMD1Q9UGP4 676 aa15.13■□□□□ 0.01
RFC5-209ENST00000543153 RRBP1Q9P2E9 1410 aaKnown RBP15.12■□□□□ 0.01
RFC5-209ENST00000543153 ATP6V1AP38606 617 aa15.12■□□□□ 0.01
RFC5-209ENST00000543153 FUT2Q10981 343 aa15.12■□□□□ 0.01
RFC5-209ENST00000543153 ZNF772Q68DY9 489 aaPredicted RBP15.12■□□□□ 0.01
RFC5-209ENST00000543153 LRP6O75581 1613 aa15.12■□□□□ 0.01
RFC5-209ENST00000543153 CLTCL1P53675 1640 aa15.12■□□□□ 0.01
RFC5-209ENST00000543153 XRN1Q8IZH2 1706 aaKnown RBP15.12■□□□□ 0.01
RFC5-209ENST00000543153 METP08581 1390 aa15.11■□□□□ 0.01
RFC5-209ENST00000543153 NRXN3Q9Y4C0 1643 aa15.11■□□□□ 0.01
RFC5-209ENST00000543153 FDX1P10109 184 aa15.11■□□□□ 0.01
RFC5-209ENST00000543153 ASXL1Q8IXJ9 1541 aa15.11■□□□□ 0.01
RFC5-209ENST00000543153 NAIPQ13075 1403 aa15.1■□□□□ 0.01
RFC5-209ENST00000543153 ACTN4O43707 911 aaKnown RBP15.1■□□□□ 0.01
RFC5-209ENST00000543153 CSPP1Q1MSJ5 1256 aa15.1■□□□□ 0.01
RFC5-209ENST00000543153 ADGRL3Q9HAR2 1447 aa15.09■□□□□ 0.01
RFC5-209ENST00000543153 NEXMIFQ5QGS0 1516 aa15.09■□□□□ 0.01
RFC5-209ENST00000543153 KCTD12Q96CX2 325 aaKnown RBP15.09■□□□□ 0.01
RFC5-209ENST00000543153 SHPRHQ149N8 1683 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms