RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 LMO7Q8WWI1 1683 aa16.56■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 PAPPAQ13219 1627 aa16.56■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 APLP1P51693 650 aa16.55■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 MRS2Q9HD23 443 aa16.54■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 SLIT3O75094 1523 aa16.54■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 YBX3P16989 372 aaKnown RBP eCLIP16.53■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 CNGB1Q14028 1251 aaPredicted RBP16.53■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 KIF24Q5T7B8 1368 aa16.52■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 MAP2P11137 1827 aaKnown RBP16.52■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 TXNRD1Q16881 649 aa16.52■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 LARP1Q6PKG0 1096 aaKnown RBP16.52■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 ABTB2Q8N961 1025 aa16.52■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 WDR90Q96KV7 1748 aa16.52■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 GRIN3BO60391 1043 aa16.51■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 PAK3O75914 559 aaPredicted RBP16.51■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 THRAP3Q9Y2W1 955 aaKnown RBP16.51■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 INSRP06213 1382 aa16.51■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 USP19O94966 1318 aa16.5■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 WNK3Q9BYP7 1800 aa16.5■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 NLRP6P59044 892 aa16.5■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 KCNH5Q8NCM2 988 aa16.5■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 NLGN2Q8NFZ4 835 aa16.5■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 BCL9O00512 1426 aa16.49■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 EVA1CP58658 441 aa16.49■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 QSER1Q2KHR3 1735 aa16.49■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 CFAP53Q96M91 514 aa16.49■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 NFAT5O94916 1531 aa16.49■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 KLHL34Q8N239 644 aa16.48■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 ZNF526Q8TF50 670 aaPredicted RBP16.48■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 ABCC6O95255 1503 aa16.47■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 RTL1A6NKG5 1358 aa16.47■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 COL3A1P02461 1466 aaPredicted RBP16.47■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 KIF3CO14782 793 aa16.46■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 TNNT2P45379 298 aaPredicted RBP16.46■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 MTHFSP49914 203 aa16.46■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 ZC3H6P61129 1189 aaKnown RBP16.46■□□□□ 0.23
CACNA1C-IT3-201ENST00000542680 CCDC184Q52MB2 194 aa16.45■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 JMYQ8N9B5 988 aa16.45■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 PNISRQ8TF01 805 aaKnown RBP16.45■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 POLKQ9UBT6 870 aa16.45■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 LTN1O94822 1766 aa16.45■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 COL5A2P05997 1499 aaPredicted RBP16.43■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 FLT4P35916 1363 aa16.43■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 NHSQ6T4R5 1651 aa16.41■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 TUBGCP6Q96RT7 1819 aa16.41■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 CRB1P82279 1406 aa16.41■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 MAP3K19Q56UN5 1328 aa16.41■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 CPDO75976 1380 aa16.4■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 GCP02774 474 aa16.4■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 POLD1P28340 1107 aa16.4■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 WDR43Q15061 677 aaKnown RBP eCLIP16.4■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 DDB1Q16531 1140 aa16.4■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 ZNF827Q17R98 1081 aa16.4■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 MARCH10Q8NA82 808 aaPredicted RBP16.4■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 KLRG1Q96E93 195 aa16.4■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 NUDCQ9Y266 331 aa16.4■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 EMILIN1Q9Y6C2 1016 aa16.4■□□□□ 0.22
CACNA1C-IT3-201ENST00000542680 RRS1Q15050 365 aaKnown RBP16.39■□□□□ 0.21
CACNA1C-IT3-201ENST00000542680 NUTM2GQ5VZR2 741 aa16.39■□□□□ 0.21
CACNA1C-IT3-201ENST00000542680 DIAPH1O60610 1272 aaKnown RBP16.38■□□□□ 0.21
CACNA1C-IT3-201ENST00000542680 SLC16A10Q8TF71 515 aa16.38■□□□□ 0.21
CACNA1C-IT3-201ENST00000542680 ARHGEF25Q86VW2 580 aa16.37■□□□□ 0.21
CACNA1C-IT3-201ENST00000542680 WWC3Q9ULE0 1092 aa16.37■□□□□ 0.21
CACNA1C-IT3-201ENST00000542680 AMPHP49418 695 aa16.36■□□□□ 0.21
CACNA1C-IT3-201ENST00000542680 FAM9BQ8IZU0 186 aa16.36■□□□□ 0.21
CACNA1C-IT3-201ENST00000542680 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
CACNA1C-IT3-201ENST00000542680 FAM208AQ9UK61 1670 aaKnown RBP16.35■□□□□ 0.21
CACNA1C-IT3-201ENST00000542680 IP6K1Q92551 441 aa16.35■□□□□ 0.21
CACNA1C-IT3-201ENST00000542680 BTAF1O14981 1849 aa16.35■□□□□ 0.21
CACNA1C-IT3-201ENST00000542680 COL18A1P39060 1754 aa16.34■□□□□ 0.21
CACNA1C-IT3-201ENST00000542680 PPM1GO15355 546 aaPredicted RBP16.34■□□□□ 0.21
CACNA1C-IT3-201ENST00000542680 FBLN1P23142 703 aa16.34■□□□□ 0.21
CACNA1C-IT3-201ENST00000542680 HOXC9P31274 260 aa16.34■□□□□ 0.21
CACNA1C-IT3-201ENST00000542680 SOX12O15370 315 aa16.33■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 TOMM70O94826 608 aa16.33■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 IL13P35225 146 aa16.33■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 PNNQ9H307 717 aaKnown RBP16.33■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 HTRA3P83110 453 aa16.32■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 NGEFQ8N5V2 710 aa16.31■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 ADAMTS8Q9UP79 889 aa16.31■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 PNPLA7Q6ZV29 1317 aa16.3■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 EIF4A2Q14240 407 aaKnown RBP16.3■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 HSP90AB2PQ58FF8 381 aa16.3■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 AKT1S1Q96B36 256 aa16.3■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 FCHSD2O94868 740 aa16.29■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 U2AF1L5P0DN76 240 aaPredicted RBP16.29■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 U2AF1Q01081 240 aaKnown RBP eCLIP16.29■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 NCBP3Q53F19 620 aaKnown RBP16.29■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 LRRC4BQ9NT99 713 aa16.29■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 KDRP35968 1356 aa16.28■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 PLEKHG2Q9H7P9 1386 aa16.28■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 IGSF1Q8N6C5 1336 aa16.28■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 RGPD5Q99666 1765 aa16.28■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 NCAPD2Q15021 1401 aa16.28■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 U2SURPO15042 1029 aaKnown RBP16.27■□□□□ 0.2
CACNA1C-IT3-201ENST00000542680 ERBB3P21860 1342 aa16.26■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 ZBED9Q6R2W3 1325 aa16.26■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 HNRNPUQ00839 825 aaKnown RBP eCLIP16.26■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 RUNDC1Q96C34 613 aa16.26■□□□□ 0.19
CACNA1C-IT3-201ENST00000542680 TNS2Q63HR2 1409 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms