RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 C9orf131Q5VYM1 1079 aa7.52□□□□□ -1.21
DDB1-219ENST00000541513 ZNF746Q6NUN9 644 aaPredicted RBP7.52□□□□□ -1.21
DDB1-219ENST00000541513 CHMP7Q8WUX9 453 aaPredicted RBP7.52□□□□□ -1.21
DDB1-219ENST00000541513 NUP160Q12769 1436 aa7.52□□□□□ -1.21
DDB1-219ENST00000541513 RAPGEF2Q9Y4G8 1499 aa7.51□□□□□ -1.21
DDB1-219ENST00000541513 USP17L5A8MUK1 530 aa7.51□□□□□ -1.21
DDB1-219ENST00000541513 H3BRB1 525 aa7.51□□□□□ -1.21
DDB1-219ENST00000541513 GTF2F1P35269 517 aaKnown RBP eCLIP7.51□□□□□ -1.21
DDB1-219ENST00000541513 IRX6P78412 446 aaPredicted RBP7.51□□□□□ -1.21
DDB1-219ENST00000541513 ANKRD13DQ6ZTN6 518 aa7.51□□□□□ -1.21
DDB1-219ENST00000541513 TAS1R3Q7RTX0 852 aa7.51□□□□□ -1.21
DDB1-219ENST00000541513 HELBQ8NG08 1087 aaPredicted RBP7.51□□□□□ -1.21
DDB1-219ENST00000541513 TUT1Q9H6E5 874 aaKnown RBP7.51□□□□□ -1.21
DDB1-219ENST00000541513 FAN1Q9Y2M0 1017 aa7.51□□□□□ -1.21
DDB1-219ENST00000541513 KIF21BO75037 1637 aa7.51□□□□□ -1.21
DDB1-219ENST00000541513 CLASP1Q7Z460 1538 aa7.51□□□□□ -1.21
DDB1-219ENST00000541513 CEP170Q5SW79 1584 aa7.5□□□□□ -1.21
DDB1-219ENST00000541513 PIK3CDO00329 1044 aa7.5□□□□□ -1.21
DDB1-219ENST00000541513 MAFGO15525 162 aa7.5□□□□□ -1.21
DDB1-219ENST00000541513 MAP4K4O95819 1239 aaPredicted RBP7.5□□□□□ -1.21
DDB1-219ENST00000541513 NEFLP07196 543 aa7.5□□□□□ -1.21
DDB1-219ENST00000541513 HSD3B2P26439 372 aa7.5□□□□□ -1.21
DDB1-219ENST00000541513 ITGAEP38570 1179 aa7.5□□□□□ -1.21
DDB1-219ENST00000541513 SETQ01105 290 aaPredicted RBP7.5□□□□□ -1.21
DDB1-219ENST00000541513 ECM1Q16610 540 aa7.5□□□□□ -1.21
DDB1-219ENST00000541513 LARP1Q6PKG0 1096 aaKnown RBP7.5□□□□□ -1.21
DDB1-219ENST00000541513 TMEM92Q6UXU6 159 aa7.5□□□□□ -1.21
DDB1-219ENST00000541513 LRRN4Q8WUT4 740 aa7.5□□□□□ -1.21
DDB1-219ENST00000541513 VTI1AQ96AJ9 217 aa7.5□□□□□ -1.21
DDB1-219ENST00000541513 CCSER2Q9H7U1 834 aa7.5□□□□□ -1.21
DDB1-219ENST00000541513 CTTNBP2Q8WZ74 1663 aa7.49□□□□□ -1.21
DDB1-219ENST00000541513 ATP5J2-PTCD1G3V325 749 aa7.49□□□□□ -1.21
DDB1-219ENST00000541513 C21orf2O43822 256 aa7.49□□□□□ -1.21
DDB1-219ENST00000541513 FANCCQ00597 558 aa7.49□□□□□ -1.21
DDB1-219ENST00000541513 GPR153Q6NV75 609 aa7.49□□□□□ -1.21
DDB1-219ENST00000541513 ANKMY2Q8IV38 441 aa7.49□□□□□ -1.21
DDB1-219ENST00000541513 GLYCTKQ8IVS8 523 aa7.49□□□□□ -1.21
DDB1-219ENST00000541513 EPS8L1Q8TE68 723 aa7.49□□□□□ -1.21
DDB1-219ENST00000541513 PTCD2Q8WV60 388 aaKnown RBP7.49□□□□□ -1.21
DDB1-219ENST00000541513 UBA5Q9GZZ9 404 aa7.49□□□□□ -1.21
DDB1-219ENST00000541513 CHPF2Q9P2E5 772 aa7.49□□□□□ -1.21
DDB1-219ENST00000541513 GNL2Q13823 731 aaKnown RBP7.48□□□□□ -1.21
DDB1-219ENST00000541513 RNF187Q5TA31 235 aaPredicted RBP7.48□□□□□ -1.21
DDB1-219ENST00000541513 TYW1BQ6NUM6 668 aa7.48□□□□□ -1.21
DDB1-219ENST00000541513 JAZF1Q86VZ6 243 aa7.48□□□□□ -1.21
DDB1-219ENST00000541513 SLF2Q8IX21 1173 aa7.48□□□□□ -1.21
DDB1-219ENST00000541513 OSBPL2Q9H1P3 480 aa7.48□□□□□ -1.21
DDB1-219ENST00000541513 ZSWIM4Q9H7M6 989 aa7.48□□□□□ -1.21
DDB1-219ENST00000541513 CAPN10Q9HC96 672 aa7.48□□□□□ -1.21
DDB1-219ENST00000541513 MKRN1Q9UHC7 482 aaKnown RBP7.48□□□□□ -1.21
DDB1-219ENST00000541513 IQSEC3Q9UPP2 1182 aaPredicted RBP7.48□□□□□ -1.21
DDB1-219ENST00000541513 PCDHGA10Q9Y5H3 936 aa7.48□□□□□ -1.21
DDB1-219ENST00000541513 SHROOM2Q13796 1616 aa7.48□□□□□ -1.21
DDB1-219ENST00000541513 RIMBP2O15034 1052 aa7.47□□□□□ -1.21
DDB1-219ENST00000541513 SCNN1AP37088 669 aa7.47□□□□□ -1.21
DDB1-219ENST00000541513 USP46P62068 366 aa7.47□□□□□ -1.21
DDB1-219ENST00000541513 ARHGAP4P98171 946 aa7.47□□□□□ -1.21
DDB1-219ENST00000541513 FGD1P98174 961 aa7.47□□□□□ -1.21
DDB1-219ENST00000541513 NR1H3Q13133 447 aa7.47□□□□□ -1.21
DDB1-219ENST00000541513 RNF34Q969K3 372 aa7.47□□□□□ -1.21
DDB1-219ENST00000541513 RBM33Q96EV2 1170 aaKnown RBP7.47□□□□□ -1.21
DDB1-219ENST00000541513 KIAA0586Q9BVV6 1533 aa7.47□□□□□ -1.21
DDB1-219ENST00000541513 HMGB1P1B2RPK0 211 aaPredicted RBP7.46□□□□□ -1.22
DDB1-219ENST00000541513 PEX14O75381 377 aa7.46□□□□□ -1.22
DDB1-219ENST00000541513 SKIP12755 728 aa7.46□□□□□ -1.22
DDB1-219ENST00000541513 RASA1P20936 1047 aa7.46□□□□□ -1.22
DDB1-219ENST00000541513 ZNF211Q13398 564 aaPredicted RBP7.46□□□□□ -1.22
DDB1-219ENST00000541513 TMEM87AQ8NBN3 555 aa7.46□□□□□ -1.22
DDB1-219ENST00000541513 COL4A3BPQ9Y5P4 624 aa7.46□□□□□ -1.22
DDB1-219ENST00000541513 IQGAP2Q13576 1575 aa7.46□□□□□ -1.22
DDB1-219ENST00000541513 ABL1P00519 1130 aa7.45□□□□□ -1.22
DDB1-219ENST00000541513 P4HBP07237 508 aaKnown RBP7.45□□□□□ -1.22
DDB1-219ENST00000541513 LSM11P83369 360 aaKnown RBP eCLIP7.45□□□□□ -1.22
DDB1-219ENST00000541513 RALBP1Q15311 655 aa7.45□□□□□ -1.22
DDB1-219ENST00000541513 SPTY2D1Q68D10 685 aaPredicted RBP7.45□□□□□ -1.22
DDB1-219ENST00000541513 IRF2BPLQ9H1B7 796 aa7.45□□□□□ -1.22
DDB1-219ENST00000541513 ZSWIM6Q9HCJ5 1215 aa7.45□□□□□ -1.22
DDB1-219ENST00000541513 CXXC1Q9P0U4 656 aaPredicted RBP7.45□□□□□ -1.22
DDB1-219ENST00000541513 GOLGA3Q08378 1498 aa7.44□□□□□ -1.22
DDB1-219ENST00000541513 RCCD1A6NED2 376 aa7.44□□□□□ -1.22
DDB1-219ENST00000541513 U2SURPO15042 1029 aaKnown RBP7.44□□□□□ -1.22
DDB1-219ENST00000541513 HOXA2O43364 376 aa7.44□□□□□ -1.22
DDB1-219ENST00000541513 FDX1P10109 184 aa7.44□□□□□ -1.22
DDB1-219ENST00000541513 SF3B2Q13435 895 aaKnown RBP7.44□□□□□ -1.22
DDB1-219ENST00000541513 OCLNQ16625 522 aa7.44□□□□□ -1.22
DDB1-219ENST00000541513 PLEKHG6Q3KR16 790 aa7.44□□□□□ -1.22
DDB1-219ENST00000541513 APBB1IPQ7Z5R6 666 aaPredicted RBP7.44□□□□□ -1.22
DDB1-219ENST00000541513 PMFBP1Q8TBY8 1022 aa7.44□□□□□ -1.22
DDB1-219ENST00000541513 PCDH12Q9NPG4 1184 aa7.44□□□□□ -1.22
DDB1-219ENST00000541513 ENPP3O14638 875 aa7.43□□□□□ -1.22
DDB1-219ENST00000541513 FMR1Q06787 632 aaKnown RBP eCLIP7.43□□□□□ -1.221e-8■■■■■ 35.2
DDB1-219ENST00000541513 MTMR2Q13614 643 aa7.43□□□□□ -1.22
DDB1-219ENST00000541513 PPP1R18Q6NYC8 613 aa7.43□□□□□ -1.22
DDB1-219ENST00000541513 TMC4Q7Z404 712 aa7.43□□□□□ -1.22
DDB1-219ENST00000541513 FAM174AQ8TBP5 190 aa7.43□□□□□ -1.22
DDB1-219ENST00000541513 RBCK1Q9BYM8 510 aa7.43□□□□□ -1.22
DDB1-219ENST00000541513 ACBD3Q9H3P7 528 aa7.43□□□□□ -1.22
DDB1-219ENST00000541513 DMGDHQ9UI17 866 aaKnown RBP7.43□□□□□ -1.22
DDB1-219ENST00000541513 RIMBP3CA6NJZ7 1639 aa7.42□□□□□ -1.22
DDB1-219ENST00000541513 RIMBP3BA6NNM3 1639 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms