RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ANKRD7Q92527 254 aa6.41□□□□□ -1.38
PTPRD-213ENST00000537002 TTLL5Q6EMB2 1281 aa6.4□□□□□ -1.38
PTPRD-213ENST00000537002 POLR3GO15318 223 aaPredicted RBP6.4□□□□□ -1.38
PTPRD-213ENST00000537002 ALDH1L2Q3SY69 923 aa6.4□□□□□ -1.38
PTPRD-213ENST00000537002 ZNF397Q8NF99 534 aaPredicted RBP6.4□□□□□ -1.38
PTPRD-213ENST00000537002 TRAK1Q9UPV9 953 aa6.4□□□□□ -1.38
PTPRD-213ENST00000537002 C9orf84Q5VXU9 1444 aa6.4□□□□□ -1.38
PTPRD-213ENST00000537002 WDR33Q9C0J8 1336 aaKnown RBP6.4□□□□□ -1.38
PTPRD-213ENST00000537002 ATP8B1O43520 1251 aa6.4□□□□□ -1.38
PTPRD-213ENST00000537002 ZKSCAN1P17029 563 aaPredicted RBP6.4□□□□□ -1.38
PTPRD-213ENST00000537002 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.4□□□□□ -1.38
PTPRD-213ENST00000537002 FAM107BQ9H098 131 aa6.4□□□□□ -1.38
PTPRD-213ENST00000537002 GEMIN8Q9NWZ8 242 aaKnown RBP6.4□□□□□ -1.38
PTPRD-213ENST00000537002 MYOM2P54296 1465 aa6.4□□□□□ -1.38
PTPRD-213ENST00000537002 SBNO2Q9Y2G9 1366 aa6.4□□□□□ -1.39
PTPRD-213ENST00000537002 CHD1LQ86WJ1 897 aa6.4□□□□□ -1.39
PTPRD-213ENST00000537002 DHX37Q8IY37 1157 aaKnown RBP6.4□□□□□ -1.39
PTPRD-213ENST00000537002 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.4□□□□□ -1.39
PTPRD-213ENST00000537002 DEF6Q9H4E7 631 aa6.4□□□□□ -1.39
PTPRD-213ENST00000537002 KDM6BO15054 1643 aa6.4□□□□□ -1.39
PTPRD-213ENST00000537002 SEC24BO95487 1268 aa6.4□□□□□ -1.39
PTPRD-213ENST00000537002 BMS1Q14692 1282 aaKnown RBP6.4□□□□□ -1.39
PTPRD-213ENST00000537002 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.4□□□□□ -1.39
PTPRD-213ENST00000537002 WWC1Q8IX03 1113 aa6.4□□□□□ -1.39
PTPRD-213ENST00000537002 C16orf45Q96MC5 204 aaPredicted RBP6.4□□□□□ -1.39
PTPRD-213ENST00000537002 TESK2Q96S53 571 aa6.4□□□□□ -1.39
PTPRD-213ENST00000537002 NOL10Q9BSC4 688 aaKnown RBP6.4□□□□□ -1.39
PTPRD-213ENST00000537002 CCDC9Q9Y3X0 531 aaKnown RBP6.4□□□□□ -1.39
PTPRD-213ENST00000537002 CROCC2H7BZ55 1655 aa6.4□□□□□ -1.39
PTPRD-213ENST00000537002 CCDC171Q6TFL3 1326 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 FAM135AQ9P2D6 1515 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 LMOD3Q0VAK6 560 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 CCDC183Q5T5S1 534 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 PAXIP1Q6ZW49 1069 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-213ENST00000537002 ARHGAP45Q92619 1136 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 ZNF622Q969S3 477 aaKnown RBP eCLIP6.39□□□□□ -1.39
PTPRD-213ENST00000537002 FMNL2Q96PY5 1086 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 ELP1O95163 1332 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 USP8P40818 1118 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 TUBB4BP68371 445 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 RUFY1Q96T51 708 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-213ENST00000537002 A0A0G2JS52 829 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 IBSPP21815 317 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-213ENST00000537002 ANAPC15P60006 121 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 TNMDQ9H2S6 317 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 ARHGEF5Q12774 1597 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 CDK13Q14004 1512 aaKnown RBP6.39□□□□□ -1.39
PTPRD-213ENST00000537002 NUCB1Q02818 461 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 CAMK4Q16566 473 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 RPAINQ86UA6 219 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 TACO1Q9BSH4 297 aaKnown RBP6.39□□□□□ -1.39
PTPRD-213ENST00000537002 LMBRD1Q9NUN5 540 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 PPP6R1Q9UPN7 881 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 FAM177A1Q8N128 213 aaPredicted RBP6.39□□□□□ -1.39
PTPRD-213ENST00000537002 PUS7Q96PZ0 661 aaKnown RBP6.39□□□□□ -1.39
PTPRD-213ENST00000537002 ASXL2Q76L83 1435 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 ATF7IPQ6VMQ6 1270 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 RASSF8Q8NHQ8 419 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 KIF24Q5T7B8 1368 aa6.39□□□□□ -1.39
PTPRD-213ENST00000537002 NAT10Q9H0A0 1025 aaKnown RBP6.39□□□□□ -1.39
PTPRD-213ENST00000537002 CEBPZQ03701 1054 aaKnown RBP6.38□□□□□ -1.39
PTPRD-213ENST00000537002 TMCO3Q6UWJ1 677 aa6.38□□□□□ -1.39
PTPRD-213ENST00000537002 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.38□□□□□ -1.39
PTPRD-213ENST00000537002 ADCY10Q96PN6 1610 aa6.38□□□□□ -1.39
PTPRD-213ENST00000537002 ZNF644Q9H582 1327 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-213ENST00000537002 ADCY5O95622 1261 aa6.38□□□□□ -1.39
PTPRD-213ENST00000537002 TNNT1P13805 278 aa6.38□□□□□ -1.39
PTPRD-213ENST00000537002 FILIP1Q7Z7B0 1213 aa6.38□□□□□ -1.39
PTPRD-213ENST00000537002 THEMISQ8N1K5 641 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-213ENST00000537002 BCL2L12Q9HB09 334 aa6.38□□□□□ -1.39
PTPRD-213ENST00000537002 TMEM51Q9NW97 253 aa6.38□□□□□ -1.39
PTPRD-213ENST00000537002 MORC2Q9Y6X9 1032 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-213ENST00000537002 MAGI3Q5TCQ9 1506 aa6.38□□□□□ -1.39
PTPRD-213ENST00000537002 ERCC4Q92889 916 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-213ENST00000537002 CCDC34Q96HJ3 373 aa6.38□□□□□ -1.39
PTPRD-213ENST00000537002 DDX41Q9UJV9 622 aaKnown RBP6.38□□□□□ -1.39
PTPRD-213ENST00000537002 IVLP07476 585 aa6.38□□□□□ -1.39
PTPRD-213ENST00000537002 PHF23Q9BUL5 403 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-213ENST00000537002 CYP2E1P05181 493 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-213ENST00000537002 PRIM1P49642 420 aaKnown RBP6.38□□□□□ -1.39
PTPRD-213ENST00000537002 BRPF1P55201 1214 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-213ENST00000537002 CEP120Q8N960 986 aa6.38□□□□□ -1.39
PTPRD-213ENST00000537002 SRRTQ9BXP5 876 aaKnown RBP6.38□□□□□ -1.39
PTPRD-213ENST00000537002 SHROOM2Q13796 1616 aa6.38□□□□□ -1.39
PTPRD-213ENST00000537002 TERF2IPQ9NYB0 399 aa6.37□□□□□ -1.39
PTPRD-213ENST00000537002 TERF2Q15554 542 aa6.37□□□□□ -1.39
PTPRD-213ENST00000537002 RUFY2Q8WXA3 655 aa6.37□□□□□ -1.39
PTPRD-213ENST00000537002 CCDC102AQ96A19 550 aa6.37□□□□□ -1.39
PTPRD-213ENST00000537002 RBSNQ9H1K0 784 aa6.37□□□□□ -1.39
PTPRD-213ENST00000537002 WDR7Q9Y4E6 1490 aa6.37□□□□□ -1.39
PTPRD-213ENST00000537002 TSR1Q2NL82 804 aaKnown RBP6.37□□□□□ -1.39
PTPRD-213ENST00000537002 RASSF4Q9H2L5 321 aa6.37□□□□□ -1.39
PTPRD-213ENST00000537002 PCDHB15Q9Y5E8 787 aa6.37□□□□□ -1.39
PTPRD-213ENST00000537002 NECTIN2Q92692 538 aa6.37□□□□□ -1.39
PTPRD-213ENST00000537002 TRIM34Q9BYJ4 488 aa6.37□□□□□ -1.39
PTPRD-213ENST00000537002 GDPD2Q9HCC8 539 aa6.37□□□□□ -1.39
PTPRD-213ENST00000537002 ADAMTS12P58397 1594 aa6.37□□□□□ -1.39
PTPRD-213ENST00000537002 ERC2O15083 957 aa6.37□□□□□ -1.39
PTPRD-213ENST00000537002 DIAPH1O60610 1272 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms