RNA–Protein interactions for RNA: ENST00000527296.1

NPAT-202, Transcript of nuclear protein, coactivator of histone transcription, humanhuman

APPRIS ALT2 TSL 3

Gene NPAT, Length 898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAT-202ENST00000527296 DOLKQ9UPQ8 538 aa11.8□□□□□ -0.52
NPAT-202ENST00000527296 CARNS1A5YM72 827 aa11.79□□□□□ -0.52
NPAT-202ENST00000527296 CCER2I3L3R5 266 aa11.79□□□□□ -0.52
NPAT-202ENST00000527296 INTS6LQ5JSJ4 861 aaKnown RBP11.79□□□□□ -0.52
NPAT-202ENST00000527296 SEPT12Q8IYM1 358 aa11.79□□□□□ -0.52
NPAT-202ENST00000527296 CRTC2Q53ET0 693 aaPredicted RBP11.78□□□□□ -0.52
NPAT-202ENST00000527296 RNF20Q5VTR2 975 aa11.78□□□□□ -0.52
NPAT-202ENST00000527296 SPRYD7Q5W111 196 aa11.78□□□□□ -0.52
NPAT-202ENST00000527296 VASH1Q7L8A9 365 aaPredicted RBP11.78□□□□□ -0.52
NPAT-202ENST00000527296 ZMIZ1Q9ULJ6 1067 aa11.78□□□□□ -0.52
NPAT-202ENST00000527296 TLL2Q9Y6L7 1015 aa11.78□□□□□ -0.52
NPAT-202ENST00000527296 TIAM1Q13009 1591 aa11.78□□□□□ -0.52
NPAT-202ENST00000527296 MAPKBP1O60336 1514 aa11.77□□□□□ -0.52
NPAT-202ENST00000527296 WNT7AO00755 349 aa11.77□□□□□ -0.53
NPAT-202ENST00000527296 GRM5P41594 1212 aa11.77□□□□□ -0.53
NPAT-202ENST00000527296 EML3Q32P44 896 aa11.77□□□□□ -0.53
NPAT-202ENST00000527296 MPNDQ8N594 471 aa11.77□□□□□ -0.53
NPAT-202ENST00000527296 SETD5Q9C0A6 1442 aa11.77□□□□□ -0.53
NPAT-202ENST00000527296 HMGXB3Q12766 1538 aa11.76□□□□□ -0.53
NPAT-202ENST00000527296 TMEM88BA6NKF7 163 aa11.76□□□□□ -0.53
NPAT-202ENST00000527296 FAM196BA6NMK8 535 aa11.76□□□□□ -0.53
NPAT-202ENST00000527296 CLDN10P78369 228 aa11.76□□□□□ -0.53
NPAT-202ENST00000527296 ELOAQ14241 798 aaKnown RBP11.76□□□□□ -0.53
NPAT-202ENST00000527296 OXLD1Q5BKU9 147 aa11.76□□□□□ -0.53
NPAT-202ENST00000527296 MRGPRX2Q96LB1 330 aa11.76□□□□□ -0.53
NPAT-202ENST00000527296 PCDHB11Q9Y5F2 797 aa11.76□□□□□ -0.53
NPAT-202ENST00000527296 ATP5J2-PTCD1G3V325 749 aa11.75□□□□□ -0.53
NPAT-202ENST00000527296 CSB-PGBD3P0DP91 1061 aa11.75□□□□□ -0.53
NPAT-202ENST00000527296 RAB15P59190 212 aa11.75□□□□□ -0.53
NPAT-202ENST00000527296 PTK7Q13308 1070 aa11.75□□□□□ -0.53
NPAT-202ENST00000527296 ARID5BQ14865 1188 aa11.75□□□□□ -0.53
NPAT-202ENST00000527296 USTQ9Y2C2 406 aa11.75□□□□□ -0.53
NPAT-202ENST00000527296 RAB3GAP2Q9H2M9 1393 aa11.75□□□□□ -0.53
NPAT-202ENST00000527296 ARHGAP35Q9NRY4 1499 aa11.75□□□□□ -0.53
NPAT-202ENST00000527296 USP17L15C9J2P7 530 aa11.74□□□□□ -0.53
NPAT-202ENST00000527296 USP17L10C9JJH3 530 aa11.74□□□□□ -0.53
NPAT-202ENST00000527296 USP17L13C9JLJ4 530 aa11.74□□□□□ -0.53
NPAT-202ENST00000527296 USP17L12C9JPN9 530 aa11.74□□□□□ -0.53
NPAT-202ENST00000527296 USP17L11C9JVI0 530 aa11.74□□□□□ -0.53
NPAT-202ENST00000527296 USP17L21D6R901 530 aa11.74□□□□□ -0.53
NPAT-202ENST00000527296 USP17L18D6R9N7 530 aa11.74□□□□□ -0.53
NPAT-202ENST00000527296 USP17L22D6RA61 530 aa11.74□□□□□ -0.53
NPAT-202ENST00000527296 USP17L17D6RBQ6 530 aa11.74□□□□□ -0.53
NPAT-202ENST00000527296 USP17L19D6RCP7 530 aa11.74□□□□□ -0.53
NPAT-202ENST00000527296 USP17L20D6RJB6 530 aa11.74□□□□□ -0.53
NPAT-202ENST00000527296 ERVH48-1M5A8F1 160 aa11.74□□□□□ -0.53
NPAT-202ENST00000527296 RASA1P20936 1047 aa11.74□□□□□ -0.53
NPAT-202ENST00000527296 USP17L24Q0WX57 530 aa11.74□□□□□ -0.53
NPAT-202ENST00000527296 STK32AQ8WU08 396 aa11.74□□□□□ -0.53
NPAT-202ENST00000527296 CFAP43Q8NDM7 1665 aa11.74□□□□□ -0.53
NPAT-202ENST00000527296 FHAD1B1AJZ9 1412 aa11.73□□□□□ -0.53
NPAT-202ENST00000527296 ZBTB7BO15156 539 aaPredicted RBP11.73□□□□□ -0.53
NPAT-202ENST00000527296 DKK1O94907 266 aa11.73□□□□□ -0.53
NPAT-202ENST00000527296 OGFOD1Q8N543 542 aa11.73□□□□□ -0.53
NPAT-202ENST00000527296 KIAA1024Q9UPX6 916 aa11.73□□□□□ -0.53
NPAT-202ENST00000527296 NOD1Q9Y239 953 aa11.73□□□□□ -0.53
NPAT-202ENST00000527296 FSHRP23945 695 aa11.72□□□□□ -0.53
NPAT-202ENST00000527296 SCTRP47872 440 aa11.72□□□□□ -0.53
NPAT-202ENST00000527296 ZNF697Q5TEC3 545 aa11.72□□□□□ -0.53
NPAT-202ENST00000527296 TMEM164Q5U3C3 297 aa11.72□□□□□ -0.53
NPAT-202ENST00000527296 ZNF598Q86UK7 904 aaKnown RBP11.72□□□□□ -0.53
NPAT-202ENST00000527296 CCDC125Q86Z20 511 aa11.72□□□□□ -0.53
NPAT-202ENST00000527296 PKD2L1Q9P0L9 805 aa11.72□□□□□ -0.53
NPAT-202ENST00000527296 NOVA2Q9UNW9 492 aaKnown RBP11.72□□□□□ -0.53
NPAT-202ENST00000527296 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.71□□□□□ -0.53
NPAT-202ENST00000527296 LARP1Q6PKG0 1096 aaKnown RBP11.71□□□□□ -0.53
NPAT-202ENST00000527296 PRKD2Q9BZL6 878 aa11.71□□□□□ -0.53
NPAT-202ENST00000527296 BCL11AQ9H165 835 aa11.71□□□□□ -0.53
NPAT-202ENST00000527296 PCDHGA11Q9Y5H2 935 aa11.71□□□□□ -0.53
NPAT-202ENST00000527296 CUX1P39880 1505 aa11.7□□□□□ -0.54
NPAT-202ENST00000527296 ANP32CO43423 234 aa11.7□□□□□ -0.54
NPAT-202ENST00000527296 ADH1CP00326 375 aa11.7□□□□□ -0.54
NPAT-202ENST00000527296 GTF2IP78347 998 aa11.7□□□□□ -0.54
NPAT-202ENST00000527296 TMPRSS4Q9NRS4 437 aa11.7□□□□□ -0.54
NPAT-202ENST00000527296 DNAAF2Q9NVR5 837 aaKnown RBP11.7□□□□□ -0.54
NPAT-202ENST00000527296 PRDM2Q13029 1718 aa11.69□□□□□ -0.54
NPAT-202ENST00000527296 NR3C2P08235 984 aa11.69□□□□□ -0.54
NPAT-202ENST00000527296 RANGAP1P46060 587 aaPredicted RBP11.69□□□□□ -0.54
NPAT-202ENST00000527296 TRIM50Q86XT4 487 aa11.69□□□□□ -0.54
NPAT-202ENST00000527296 LRRC9Q6ZRR7 1453 aa11.69□□□□□ -0.54
NPAT-202ENST00000527296 FAM69CQ0P6D2 419 aa11.68□□□□□ -0.54
NPAT-202ENST00000527296 USP4Q13107 963 aa11.68□□□□□ -0.54
NPAT-202ENST00000527296 ERICH6BQ5W0A0 696 aa11.68□□□□□ -0.54
NPAT-202ENST00000527296 ANKMY2Q8IV38 441 aa11.68□□□□□ -0.54
NPAT-202ENST00000527296 ZNF594Q96JF6 807 aaPredicted RBP11.68□□□□□ -0.54
NPAT-202ENST00000527296 V9GY48 417 aaPredicted RBP11.68□□□□□ -0.54
NPAT-202ENST00000527296 ATP1A2P50993 1020 aa11.67□□□□□ -0.54
NPAT-202ENST00000527296 ERVK-9P63128 1117 aa11.67□□□□□ -0.54
NPAT-202ENST00000527296 PDE4CQ08493 712 aa11.67□□□□□ -0.54
NPAT-202ENST00000527296 DPYDQ12882 1025 aa11.67□□□□□ -0.54
NPAT-202ENST00000527296 SIX5Q8N196 739 aa11.67□□□□□ -0.54
NPAT-202ENST00000527296 LARGE2Q8N3Y3 721 aa11.67□□□□□ -0.54
NPAT-202ENST00000527296 SLAIN2Q9P270 581 aa11.67□□□□□ -0.54
NPAT-202ENST00000527296 WDR97A6NE52 1622 aa11.67□□□□□ -0.54
NPAT-202ENST00000527296 FOXC1Q12948 553 aa11.66□□□□□ -0.54
NPAT-202ENST00000527296 LILRA1O75019 489 aa11.65□□□□□ -0.54
NPAT-202ENST00000527296 NR5A1Q13285 461 aa11.65□□□□□ -0.54
NPAT-202ENST00000527296 PPP1R26Q5T8A7 1209 aaPredicted RBP11.65□□□□□ -0.54
NPAT-202ENST00000527296 CCDC116Q8IYX3 515 aa11.65□□□□□ -0.54
NPAT-202ENST00000527296 NCAPD3P42695 1498 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms