RNA–Protein interactions for RNA: ENST00000527296.1

NPAT-202, Transcript of nuclear protein, coactivator of histone transcription, humanhuman

APPRIS ALT2 TSL 3

Gene NPAT, Length 898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAT-202ENST00000527296 AEBP2Q6ZN18 517 aaPredicted RBP29.62■■■□□ 2.33
NPAT-202ENST00000527296 CHIC1Q5VXU3 224 aa29.32■■■□□ 2.28
NPAT-202ENST00000527296 PHF23Q9BUL5 403 aaPredicted RBP25.92■■□□□ 1.74
NPAT-202ENST00000527296 SENP3Q9H4L4 574 aaPredicted RBP24.91■■□□□ 1.58
NPAT-202ENST00000527296 PLPPR3Q6T4P5 718 aa23.95■■□□□ 1.42
NPAT-202ENST00000527296 FOXD1Q16676 465 aa23.15■■□□□ 1.3
NPAT-202ENST00000527296 PPP6R1Q9UPN7 881 aa22.71■■□□□ 1.23
NPAT-202ENST00000527296 ADRA2BP18089 450 aa22.67■■□□□ 1.22
NPAT-202ENST00000527296 PIAS4Q8N2W9 510 aaPredicted RBP21.88■■□□□ 1.09
NPAT-202ENST00000527296 KCNA4P22459 653 aa21.33■■□□□ 1.01
NPAT-202ENST00000527296 PPP4R3CPQ6ZMV5 832 aa21.22■□□□□ 0.99
NPAT-202ENST00000527296 MSH5O43196 834 aa21.11■□□□□ 0.97
NPAT-202ENST00000527296 NCBP3Q53F19 620 aaKnown RBP20.7■□□□□ 0.9
NPAT-202ENST00000527296 POTEDQ86YR6 584 aa20.67■□□□□ 0.9
NPAT-202ENST00000527296 SCAF1Q9H7N4 1312 aaKnown RBP20.58■□□□□ 0.89
NPAT-202ENST00000527296 NPM3O75607 178 aaKnown RBP20.52■□□□□ 0.88
NPAT-202ENST00000527296 CNKSR2Q8WXI2 1034 aa20.48■□□□□ 0.87
NPAT-202ENST00000527296 MAPK8IP2Q13387 824 aaPredicted RBP20.45■□□□□ 0.86
NPAT-202ENST00000527296 SLC4A1APQ9BWU0 796 aaKnown RBP20.33■□□□□ 0.85
NPAT-202ENST00000527296 EHMT2Q96KQ7 1210 aa20.32■□□□□ 0.84
NPAT-202ENST00000527296 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
NPAT-202ENST00000527296 RNF216Q9NWF9 866 aaPredicted RBP19.98■□□□□ 0.79
NPAT-202ENST00000527296 CSRNP3Q8WYN3 585 aa19.94■□□□□ 0.78
NPAT-202ENST00000527296 DNAJC5BQ9UF47 199 aa19.87■□□□□ 0.77
NPAT-202ENST00000527296 HOXD11P31277 338 aaPredicted RBP19.8■□□□□ 0.76
NPAT-202ENST00000527296 ZBTB22O15209 634 aa19.69■□□□□ 0.74
NPAT-202ENST00000527296 FOXD4L1Q9NU39 408 aa19.42■□□□□ 0.7
NPAT-202ENST00000527296 SLC4A2P04920 1241 aa19.31■□□□□ 0.68
NPAT-202ENST00000527296 DCAF8L1A6NGE4 600 aa19.02■□□□□ 0.64
NPAT-202ENST00000527296 MYCNP04198 464 aaPredicted RBP18.89■□□□□ 0.61
NPAT-202ENST00000527296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.78■□□□□ 0.6
NPAT-202ENST00000527296 ATXN8OSP0DMR3 200 aa18.68■□□□□ 0.58
NPAT-202ENST00000527296 U3KPZ7 1027 aaPredicted RBP18.64■□□□□ 0.57
NPAT-202ENST00000527296 ATF5Q9Y2D1 282 aaPredicted RBP18.47■□□□□ 0.55
NPAT-202ENST00000527296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.41■□□□□ 0.54
NPAT-202ENST00000527296 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
NPAT-202ENST00000527296 SAMD1Q6SPF0 538 aaPredicted RBP18.41■□□□□ 0.54
NPAT-202ENST00000527296 RNF39Q9H2S5 420 aa18.16■□□□□ 0.5
NPAT-202ENST00000527296 CACNB1Q02641 598 aaPredicted RBP18.09■□□□□ 0.49
NPAT-202ENST00000527296 APLP2Q06481 763 aa18.06■□□□□ 0.48
NPAT-202ENST00000527296 ZNF219Q9P2Y4 722 aaPredicted RBP18.03■□□□□ 0.48
NPAT-202ENST00000527296 SPINK5Q9NQ38 1064 aaPredicted RBP17.98■□□□□ 0.47
NPAT-202ENST00000527296 FKBP8Q14318 412 aa17.92■□□□□ 0.46
NPAT-202ENST00000527296 C1QBPQ07021 282 aaKnown RBP17.9■□□□□ 0.46
NPAT-202ENST00000527296 TRHP20396 242 aaPredicted RBP17.84■□□□□ 0.45
NPAT-202ENST00000527296 CAPN15O75808 1086 aa17.78■□□□□ 0.44
NPAT-202ENST00000527296 MKRN4PQ13434 485 aaPredicted RBP17.69■□□□□ 0.42
NPAT-202ENST00000527296 POLA2Q14181 598 aa17.68■□□□□ 0.42
NPAT-202ENST00000527296 ABCB7O75027 752 aa17.55■□□□□ 0.4
NPAT-202ENST00000527296 FBLN2P98095 1184 aa17.48■□□□□ 0.39
NPAT-202ENST00000527296 DSG3P32926 999 aa17.45■□□□□ 0.38
NPAT-202ENST00000527296 SPDYE4A6NLX3 237 aa17.42■□□□□ 0.38
NPAT-202ENST00000527296 ZBTB12Q9Y330 459 aaPredicted RBP17.33■□□□□ 0.36
NPAT-202ENST00000527296 PROM2Q8N271 834 aa17.29■□□□□ 0.36
NPAT-202ENST00000527296 RTN4Q9NQC3 1192 aaKnown RBP17.21■□□□□ 0.35
NPAT-202ENST00000527296 AMER1Q5JTC6 1135 aaPredicted RBP17.13■□□□□ 0.33
NPAT-202ENST00000527296 OSCARQ8IYS5 282 aa17.08■□□□□ 0.32
NPAT-202ENST00000527296 FBXO3Q9UK99 471 aa17.06■□□□□ 0.32
NPAT-202ENST00000527296 SPDYE2BA6NHP3 402 aa16.97■□□□□ 0.31
NPAT-202ENST00000527296 SPDYE6P0CI01 402 aa16.97■□□□□ 0.31
NPAT-202ENST00000527296 SPDYE2Q495Y8 402 aa16.97■□□□□ 0.31
NPAT-202ENST00000527296 ZNF692Q9BU19 519 aaPredicted RBP16.97■□□□□ 0.31
NPAT-202ENST00000527296 SSUH2Q9Y2M2 353 aa16.96■□□□□ 0.31
NPAT-202ENST00000527296 VASPP50552 380 aaPredicted RBP16.9■□□□□ 0.3
NPAT-202ENST00000527296 PABPN1Q86U42 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
NPAT-202ENST00000527296 IFNLR1Q8IU57 520 aaPredicted RBP16.76■□□□□ 0.27
NPAT-202ENST00000527296 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
NPAT-202ENST00000527296 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
NPAT-202ENST00000527296 AKT1S1Q96B36 256 aa16.45■□□□□ 0.22
NPAT-202ENST00000527296 PLCD3Q8N3E9 789 aa16.44■□□□□ 0.22
NPAT-202ENST00000527296 MIER1Q8N108 512 aa16.43■□□□□ 0.22
NPAT-202ENST00000527296 KLHL34Q8N239 644 aa16.42■□□□□ 0.22
NPAT-202ENST00000527296 PKD2Q13563 968 aa16.4■□□□□ 0.22
NPAT-202ENST00000527296 SPOCK2Q92563 424 aa16.4■□□□□ 0.22
NPAT-202ENST00000527296 REM2Q8IYK8 340 aaPredicted RBP16.34■□□□□ 0.21
NPAT-202ENST00000527296 SPDYE1Q8NFV5 336 aaPredicted RBP16.33■□□□□ 0.2
NPAT-202ENST00000527296 SLC24A1O60721 1099 aa16.27■□□□□ 0.2
NPAT-202ENST00000527296 NISCHQ9Y2I1 1504 aa16.25■□□□□ 0.19
NPAT-202ENST00000527296 CLEC11AQ9Y240 323 aa16.23■□□□□ 0.19
NPAT-202ENST00000527296 POTEHQ6S545 545 aa16.21■□□□□ 0.19
NPAT-202ENST00000527296 PLEKHG5O94827 1062 aa16.2■□□□□ 0.18
NPAT-202ENST00000527296 ZBTB47Q9UFB7 747 aaPredicted RBP16.18■□□□□ 0.18
NPAT-202ENST00000527296 CREBZFQ9NS37 354 aa16.16■□□□□ 0.18
NPAT-202ENST00000527296 PITPNM1O00562 1244 aa16.15■□□□□ 0.18
NPAT-202ENST00000527296 PRR29P0C7W0 189 aa16.15■□□□□ 0.18
NPAT-202ENST00000527296 ECM2O94769 699 aaPredicted RBP16.12■□□□□ 0.17
NPAT-202ENST00000527296 MNX1P50219 401 aaPredicted RBP16.09■□□□□ 0.17
NPAT-202ENST00000527296 DCAF8L2P0C7V8 631 aa16.06■□□□□ 0.16
NPAT-202ENST00000527296 NUBP1P53384 320 aa16.06■□□□□ 0.16
NPAT-202ENST00000527296 CIZ1Q9ULV3 898 aaPredicted RBP16.04■□□□□ 0.16
NPAT-202ENST00000527296 RGL2O15211 777 aa16.02■□□□□ 0.16
NPAT-202ENST00000527296 NPM1P06748 294 aaKnown RBP eCLIP15.91■□□□□ 0.14
NPAT-202ENST00000527296 PLCB2Q00722 1185 aa15.9■□□□□ 0.14
NPAT-202ENST00000527296 GSE1Q14687 1217 aa15.9■□□□□ 0.14
NPAT-202ENST00000527296 TRIM41Q8WV44 630 aa15.88■□□□□ 0.13
NPAT-202ENST00000527296 RASEFQ8IZ41 740 aa15.87■□□□□ 0.13
NPAT-202ENST00000527296 DCAF8Q5TAQ9 597 aa15.86■□□□□ 0.13
NPAT-202ENST00000527296 CHADLQ6NUI6 762 aa15.86■□□□□ 0.13
NPAT-202ENST00000527296 RNF25Q96BH1 459 aaPredicted RBP15.83■□□□□ 0.12
NPAT-202ENST00000527296 FAM212AQ96EL1 285 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms