RNA–Protein interactions for RNA: ENST00000519542.1

GABRA1-205, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 3

Gene GABRA1, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-205ENST00000519542 KRT76Q01546 638 aa6.72□□□□□ -1.33
GABRA1-205ENST00000519542 BANK1Q8NDB2 785 aa6.72□□□□□ -1.33
GABRA1-205ENST00000519542 RNF217Q8TC41 542 aa6.72□□□□□ -1.33
GABRA1-205ENST00000519542 NANOS1Q8WY41 292 aaKnown RBP6.72□□□□□ -1.33
GABRA1-205ENST00000519542 PTGIRP43119 386 aa6.71□□□□□ -1.34
GABRA1-205ENST00000519542 RAB15P59190 212 aa6.71□□□□□ -1.34
GABRA1-205ENST00000519542 FOXD4L5Q5VV16 416 aaPredicted RBP6.71□□□□□ -1.34
GABRA1-205ENST00000519542 CCDC155Q8N6L0 562 aa6.71□□□□□ -1.34
GABRA1-205ENST00000519542 MTMR14Q8NCE2 650 aa6.71□□□□□ -1.34
GABRA1-205ENST00000519542 SMARCA2P51531 1590 aa6.7□□□□□ -1.34
GABRA1-205ENST00000519542 BAZ1AQ9NRL2 1556 aaPredicted RBP6.7□□□□□ -1.34
GABRA1-205ENST00000519542 SENP3-EIF4A1A0A087X0R7 540 aa6.7□□□□□ -1.34
GABRA1-205ENST00000519542 FAM181BA6NEQ2 426 aa6.7□□□□□ -1.34
GABRA1-205ENST00000519542 GIGYF1O75420 1035 aaPredicted RBP6.7□□□□□ -1.34
GABRA1-205ENST00000519542 ZNF395Q9H8N7 513 aaPredicted RBP6.7□□□□□ -1.34
GABRA1-205ENST00000519542 MROH2BQ7Z745 1585 aa6.69□□□□□ -1.34
GABRA1-205ENST00000519542 PCDHB9Q9Y5E1 797 aa6.69□□□□□ -1.34
GABRA1-205ENST00000519542 ITGA6P23229 1130 aa6.68□□□□□ -1.34
GABRA1-205ENST00000519542 NR1H3Q13133 447 aa6.68□□□□□ -1.34
GABRA1-205ENST00000519542 POLMQ9NP87 494 aaPredicted RBP6.68□□□□□ -1.34
GABRA1-205ENST00000519542 CYLDQ9NQC7 956 aa6.68□□□□□ -1.34
GABRA1-205ENST00000519542 SNRKQ9NRH2 765 aa6.67□□□□□ -1.34
GABRA1-205ENST00000519542 RNF144AP50876 292 aaPredicted RBP6.66□□□□□ -1.34
GABRA1-205ENST00000519542 MCCD1P59942 119 aaPredicted RBP6.66□□□□□ -1.34
GABRA1-205ENST00000519542 ERVK-9P63128 1117 aa6.66□□□□□ -1.34
GABRA1-205ENST00000519542 CCDC125Q86Z20 511 aa6.66□□□□□ -1.34
GABRA1-205ENST00000519542 RNFT1Q5M7Z0 435 aa6.65□□□□□ -1.34
GABRA1-205ENST00000519542 CNTNAP3BQ96NU0 1288 aa6.65□□□□□ -1.34
GABRA1-205ENST00000519542 COL25A1Q9BXS0 654 aaPredicted RBP6.65□□□□□ -1.34
GABRA1-205ENST00000519542 CNTNAP3Q9BZ76 1288 aa6.65□□□□□ -1.34
GABRA1-205ENST00000519542 NDUFB9Q9Y6M9 179 aa6.65□□□□□ -1.34
GABRA1-205ENST00000519542 THOC2Q8NI27 1593 aaKnown RBP6.65□□□□□ -1.35
GABRA1-205ENST00000519542 CC2D2BQ6DHV5 1058 aa6.64□□□□□ -1.35
GABRA1-205ENST00000519542 LYSMD3Q7Z3D4 306 aa6.64□□□□□ -1.35
GABRA1-205ENST00000519542 VWA5B2Q8N398 1253 aa6.64□□□□□ -1.35
GABRA1-205ENST00000519542 CUEDC1Q9NWM3 386 aaPredicted RBP6.64□□□□□ -1.35
GABRA1-205ENST00000519542 BAZ1BQ9UIG0 1483 aaKnown RBP6.64□□□□□ -1.35
GABRA1-205ENST00000519542 ATP5J2-PTCD1G3V325 749 aa6.63□□□□□ -1.35
GABRA1-205ENST00000519542 TRAK2O60296 914 aa6.63□□□□□ -1.35
GABRA1-205ENST00000519542 UBTFP17480 764 aaKnown RBP6.63□□□□□ -1.35
GABRA1-205ENST00000519542 GPC1P35052 558 aa6.63□□□□□ -1.35
GABRA1-205ENST00000519542 SCTRP47872 440 aa6.63□□□□□ -1.35
GABRA1-205ENST00000519542 NESP48681 1621 aa6.63□□□□□ -1.35
GABRA1-205ENST00000519542 RNF20Q5VTR2 975 aa6.63□□□□□ -1.35
GABRA1-205ENST00000519542 GSK3AP49840 483 aa6.62□□□□□ -1.35
GABRA1-205ENST00000519542 SV2AQ7L0J3 742 aa6.62□□□□□ -1.35
GABRA1-205ENST00000519542 TRIM52Q96A61 297 aa6.62□□□□□ -1.35
GABRA1-205ENST00000519542 OSBPL3Q9H4L5 887 aa6.62□□□□□ -1.35
GABRA1-205ENST00000519542 WIZO95785 1651 aa6.61□□□□□ -1.35
GABRA1-205ENST00000519542 KIF21AQ7Z4S6 1674 aa6.61□□□□□ -1.35
GABRA1-205ENST00000519542 A0A1W2PRU2 124 aa6.61□□□□□ -1.35
GABRA1-205ENST00000519542 SLURP2P0DP57 97 aa6.61□□□□□ -1.35
GABRA1-205ENST00000519542 ZNF385CQ66K41 422 aaPredicted RBP6.61□□□□□ -1.35
GABRA1-205ENST00000519542 PRICKLE2Q7Z3G6 844 aa6.61□□□□□ -1.35
GABRA1-205ENST00000519542 ZNF592Q92610 1267 aa6.61□□□□□ -1.35
GABRA1-205ENST00000519542 CDC14CA4D256 554 aa6.6□□□□□ -1.35
GABRA1-205ENST00000519542 RHOQP17081 205 aa6.6□□□□□ -1.35
GABRA1-205ENST00000519542 CLN3Q13286 438 aa6.6□□□□□ -1.35
GABRA1-205ENST00000519542 GAS6Q14393 721 aa6.6□□□□□ -1.35
GABRA1-205ENST00000519542 GRIP2Q9C0E4 1043 aa6.6□□□□□ -1.35
GABRA1-205ENST00000519542 ZNF330Q9Y3S2 320 aaPredicted RBP6.6□□□□□ -1.35
GABRA1-205ENST00000519542 PCDHB11Q9Y5F2 797 aa6.6□□□□□ -1.35
GABRA1-205ENST00000519542 CUX2O14529 1486 aa6.6□□□□□ -1.35
GABRA1-205ENST00000519542 APBB1O00213 710 aa6.59□□□□□ -1.35
GABRA1-205ENST00000519542 MEN1O00255 615 aa6.59□□□□□ -1.35
GABRA1-205ENST00000519542 KCNMA1Q12791 1236 aa6.59□□□□□ -1.35
GABRA1-205ENST00000519542 TRIM26Q12899 539 aaPredicted RBP6.59□□□□□ -1.35
GABRA1-205ENST00000519542 IRF5Q13568 498 aa6.59□□□□□ -1.35
GABRA1-205ENST00000519542 CYP2U1Q7Z449 544 aa6.59□□□□□ -1.35
GABRA1-205ENST00000519542 WHAMMQ8TF30 809 aa6.59□□□□□ -1.35
GABRA1-205ENST00000519542 CCDC85AQ96PX6 553 aaPredicted RBP6.59□□□□□ -1.35
GABRA1-205ENST00000519542 CEP126Q9P2H0 1117 aa6.59□□□□□ -1.35
GABRA1-205ENST00000519542 TBC1D2BQ9UPU7 963 aa6.59□□□□□ -1.35
GABRA1-205ENST00000519542 LAMC3Q9Y6N6 1575 aa6.59□□□□□ -1.35
GABRA1-205ENST00000519542 SPATA31C2B4DYI2 1134 aa6.58□□□□□ -1.36
GABRA1-205ENST00000519542 ARHGEF15O94989 841 aa6.58□□□□□ -1.36
GABRA1-205ENST00000519542 NPM2Q86SE8 214 aaKnown RBP6.58□□□□□ -1.36
GABRA1-205ENST00000519542 ZNF837Q96EG3 531 aaPredicted RBP6.58□□□□□ -1.36
GABRA1-205ENST00000519542 CDCA7Q9BWT1 371 aaPredicted RBP6.58□□□□□ -1.36
GABRA1-205ENST00000519542 ADAMTS8Q9UP79 889 aa6.58□□□□□ -1.36
GABRA1-205ENST00000519542 HRH3Q9Y5N1 445 aa6.58□□□□□ -1.36
GABRA1-205ENST00000519542 TRIM22Q8IYM9 498 aa6.57□□□□□ -1.36
GABRA1-205ENST00000519542 PHTF2Q8N3S3 785 aa6.57□□□□□ -1.36
GABRA1-205ENST00000519542 ARHGEF10LQ9HCE6 1279 aa6.57□□□□□ -1.36
GABRA1-205ENST00000519542 DYRK1BQ9Y463 629 aa6.57□□□□□ -1.36
GABRA1-205ENST00000519542 POU4F2Q12837 409 aa6.56□□□□□ -1.36
GABRA1-205ENST00000519542 DBN1Q16643 649 aa6.56□□□□□ -1.36
GABRA1-205ENST00000519542 WDR44Q5JSH3 913 aa6.56□□□□□ -1.36
GABRA1-205ENST00000519542 NBPF10Q6P3W6 841 aaKnown RBP6.56□□□□□ -1.36
GABRA1-205ENST00000519542 NBPF15Q8N660 670 aa6.56□□□□□ -1.36
GABRA1-205ENST00000519542 GMCL1Q96IK5 515 aa6.56□□□□□ -1.36
GABRA1-205ENST00000519542 CHIC2Q9UKJ5 165 aa6.56□□□□□ -1.36
GABRA1-205ENST00000519542 ADAMTS2O95450 1211 aa6.55□□□□□ -1.36
GABRA1-205ENST00000519542 GNRH1P01148 92 aa6.55□□□□□ -1.36
GABRA1-205ENST00000519542 IL2RAP01589 272 aa6.55□□□□□ -1.36
GABRA1-205ENST00000519542 SRSF11Q05519 484 aaKnown RBP6.55□□□□□ -1.36
GABRA1-205ENST00000519542 NLRP3Q96P20 1036 aa6.55□□□□□ -1.36
GABRA1-205ENST00000519542 ERCC6Q03468 1493 aa6.54□□□□□ -1.36
GABRA1-205ENST00000519542 RSF1Q96T23 1441 aaPredicted RBP6.54□□□□□ -1.36
GABRA1-205ENST00000519542 TSGA10IPQ3SY00 556 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms