RNA–Protein interactions for RNA: ENST00000519542.1

GABRA1-205, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 3

Gene GABRA1, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-205ENST00000519542 AEBP2Q6ZN18 517 aaPredicted RBP19.86■□□□□ 0.77
GABRA1-205ENST00000519542 CHIC1Q5VXU3 224 aa18.98■□□□□ 0.63
GABRA1-205ENST00000519542 SENP3Q9H4L4 574 aaPredicted RBP16.85■□□□□ 0.29
GABRA1-205ENST00000519542 PHF23Q9BUL5 403 aaPredicted RBP16.67■□□□□ 0.26
GABRA1-205ENST00000519542 FOXD1Q16676 465 aa15.73■□□□□ 0.11
GABRA1-205ENST00000519542 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
GABRA1-205ENST00000519542 PPP6R1Q9UPN7 881 aa14.83□□□□□ -0.04
GABRA1-205ENST00000519542 ADRA2BP18089 450 aa14.76□□□□□ -0.05
GABRA1-205ENST00000519542 PIAS4Q8N2W9 510 aaPredicted RBP14.67□□□□□ -0.06
GABRA1-205ENST00000519542 MSH5O43196 834 aa14.62□□□□□ -0.07
GABRA1-205ENST00000519542 POTEDQ86YR6 584 aa14.06□□□□□ -0.16
GABRA1-205ENST00000519542 MAPK8IP2Q13387 824 aaPredicted RBP13.52□□□□□ -0.25
GABRA1-205ENST00000519542 SCAF1Q9H7N4 1312 aaKnown RBP13.44□□□□□ -0.26
GABRA1-205ENST00000519542 DMRT2Q9Y5R5 561 aa13.42□□□□□ -0.26
GABRA1-205ENST00000519542 PPP4R3CPQ6ZMV5 832 aa13.34□□□□□ -0.27
GABRA1-205ENST00000519542 CNKSR2Q8WXI2 1034 aa13.05□□□□□ -0.32
GABRA1-205ENST00000519542 HOXD11P31277 338 aaPredicted RBP13□□□□□ -0.33
GABRA1-205ENST00000519542 RNF216Q9NWF9 866 aaPredicted RBP12.91□□□□□ -0.34
GABRA1-205ENST00000519542 NCBP3Q53F19 620 aaKnown RBP12.82□□□□□ -0.36
GABRA1-205ENST00000519542 DCAF8L1A6NGE4 600 aa12.74□□□□□ -0.37
GABRA1-205ENST00000519542 NPM3O75607 178 aaKnown RBP12.7□□□□□ -0.38
GABRA1-205ENST00000519542 KCNA4P22459 653 aa12.58□□□□□ -0.4
GABRA1-205ENST00000519542 DNAJC5BQ9UF47 199 aa12.54□□□□□ -0.4
GABRA1-205ENST00000519542 RNF39Q9H2S5 420 aa12.53□□□□□ -0.4
GABRA1-205ENST00000519542 CACNB1Q02641 598 aaPredicted RBP12.43□□□□□ -0.42
GABRA1-205ENST00000519542 C1QBPQ07021 282 aaKnown RBP12.33□□□□□ -0.44
GABRA1-205ENST00000519542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.29□□□□□ -0.44
GABRA1-205ENST00000519542 SLC4A2P04920 1241 aa12.12□□□□□ -0.47
GABRA1-205ENST00000519542 U3KPZ7 1027 aaPredicted RBP12.12□□□□□ -0.47
GABRA1-205ENST00000519542 SPINK5Q9NQ38 1064 aaPredicted RBP11.89□□□□□ -0.51
GABRA1-205ENST00000519542 SLC4A1APQ9BWU0 796 aaKnown RBP11.87□□□□□ -0.51
GABRA1-205ENST00000519542 CAPN15O75808 1086 aa11.8□□□□□ -0.52
GABRA1-205ENST00000519542 DSG3P32926 999 aa11.78□□□□□ -0.52
GABRA1-205ENST00000519542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.76□□□□□ -0.53
GABRA1-205ENST00000519542 HNRNPUL2Q1KMD3 747 aaKnown RBP11.76□□□□□ -0.53
GABRA1-205ENST00000519542 MYCNP04198 464 aaPredicted RBP11.72□□□□□ -0.53
GABRA1-205ENST00000519542 APLP2Q06481 763 aa11.72□□□□□ -0.53
GABRA1-205ENST00000519542 SAMD1Q6SPF0 538 aaPredicted RBP11.72□□□□□ -0.53
GABRA1-205ENST00000519542 FOXD4L1Q9NU39 408 aa11.68□□□□□ -0.54
GABRA1-205ENST00000519542 ZNF219Q9P2Y4 722 aaPredicted RBP11.66□□□□□ -0.54
GABRA1-205ENST00000519542 TRHP20396 242 aaPredicted RBP11.65□□□□□ -0.54
GABRA1-205ENST00000519542 ZBTB22O15209 634 aa11.6□□□□□ -0.55
GABRA1-205ENST00000519542 ABCB7O75027 752 aa11.56□□□□□ -0.56
GABRA1-205ENST00000519542 ATF5Q9Y2D1 282 aaPredicted RBP11.48□□□□□ -0.57
GABRA1-205ENST00000519542 POLA2Q14181 598 aa11.39□□□□□ -0.59
GABRA1-205ENST00000519542 ATXN8OSP0DMR3 200 aa11.32□□□□□ -0.6
GABRA1-205ENST00000519542 CSRNP3Q8WYN3 585 aa11.18□□□□□ -0.62
GABRA1-205ENST00000519542 RBM42Q9BTD8 480 aaKnown RBP11.18□□□□□ -0.62
GABRA1-205ENST00000519542 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
GABRA1-205ENST00000519542 OSCARQ8IYS5 282 aa11.04□□□□□ -0.64
GABRA1-205ENST00000519542 POTEHQ6S545 545 aa11.03□□□□□ -0.64
GABRA1-205ENST00000519542 EHMT2Q96KQ7 1210 aa11.02□□□□□ -0.65
GABRA1-205ENST00000519542 AKT1S1Q96B36 256 aa10.98□□□□□ -0.65
GABRA1-205ENST00000519542 MKRN4PQ13434 485 aaPredicted RBP10.97□□□□□ -0.65
GABRA1-205ENST00000519542 FBLN2P98095 1184 aa10.94□□□□□ -0.66
GABRA1-205ENST00000519542 CHRDL2Q6WN34 429 aa10.9□□□□□ -0.66
GABRA1-205ENST00000519542 REM2Q8IYK8 340 aaPredicted RBP10.88□□□□□ -0.67
GABRA1-205ENST00000519542 SPDYE2BA6NHP3 402 aa10.86□□□□□ -0.67
GABRA1-205ENST00000519542 SPDYE6P0CI01 402 aa10.86□□□□□ -0.67
GABRA1-205ENST00000519542 SPDYE2Q495Y8 402 aa10.86□□□□□ -0.67
GABRA1-205ENST00000519542 SSUH2Q9Y2M2 353 aa10.77□□□□□ -0.69
GABRA1-205ENST00000519542 PITPNM1O00562 1244 aa10.76□□□□□ -0.69
GABRA1-205ENST00000519542 ZNF692Q9BU19 519 aaPredicted RBP10.71□□□□□ -0.69
GABRA1-205ENST00000519542 PIP4P2Q8N4L2 257 aa10.69□□□□□ -0.7
GABRA1-205ENST00000519542 FXR2P51116 673 aaKnown RBP eCLIP10.67□□□□□ -0.7
GABRA1-205ENST00000519542 SPDYE1Q8NFV5 336 aaPredicted RBP10.62□□□□□ -0.71
GABRA1-205ENST00000519542 PABPN1Q86U42 306 aaKnown RBP eCLIP10.58□□□□□ -0.72
GABRA1-205ENST00000519542 CLEC11AQ9Y240 323 aa10.55□□□□□ -0.72
GABRA1-205ENST00000519542 SPDYE4A6NLX3 237 aa10.46□□□□□ -0.73
GABRA1-205ENST00000519542 PRKAR2AP13861 404 aaKnown RBP10.46□□□□□ -0.73
GABRA1-205ENST00000519542 PRR29P0C7W0 189 aa10.41□□□□□ -0.74
GABRA1-205ENST00000519542 SP7Q8TDD2 431 aaPredicted RBP10.4□□□□□ -0.74
GABRA1-205ENST00000519542 HAX1O00165 279 aa10.39□□□□□ -0.75
GABRA1-205ENST00000519542 CHADLQ6NUI6 762 aa10.38□□□□□ -0.75
GABRA1-205ENST00000519542 EVX2Q03828 476 aa10.36□□□□□ -0.75
GABRA1-205ENST00000519542 C19orf67A6NJJ6 358 aa10.32□□□□□ -0.76
GABRA1-205ENST00000519542 PROM2Q8N271 834 aa10.32□□□□□ -0.76
GABRA1-205ENST00000519542 STAG3Q9UJ98 1225 aa10.31□□□□□ -0.76
GABRA1-205ENST00000519542 CREBZFQ9NS37 354 aa10.26□□□□□ -0.77
GABRA1-205ENST00000519542 FARP1Q9Y4F1 1045 aaPredicted RBP10.25□□□□□ -0.77
GABRA1-205ENST00000519542 CD44P16070 742 aaKnown RBP10.13□□□□□ -0.79
GABRA1-205ENST00000519542 MNX1P50219 401 aaPredicted RBP10.13□□□□□ -0.79
GABRA1-205ENST00000519542 GABBR2O75899 941 aa10.11□□□□□ -0.79
GABRA1-205ENST00000519542 FKBP8Q14318 412 aa10.07□□□□□ -0.8
GABRA1-205ENST00000519542 ZNF579Q8NAF0 562 aaKnown RBP10.03□□□□□ -0.8
GABRA1-205ENST00000519542 ZRANB1Q9UGI0 708 aa10.01□□□□□ -0.81
GABRA1-205ENST00000519542 NPM1P06748 294 aaKnown RBP eCLIP10□□□□□ -0.81
GABRA1-205ENST00000519542 CLCN6P51797 869 aa9.98□□□□□ -0.81
GABRA1-205ENST00000519542 POTEIP0CG38 1075 aa9.95□□□□□ -0.82
GABRA1-205ENST00000519542 MIER1Q8N108 512 aa9.92□□□□□ -0.82
GABRA1-205ENST00000519542 PAK3O75914 559 aaPredicted RBP9.91□□□□□ -0.82
GABRA1-205ENST00000519542 PHF12Q96QT6 1004 aa9.9□□□□□ -0.82
GABRA1-205ENST00000519542 GALR2O43603 387 aaPredicted RBP9.88□□□□□ -0.83
GABRA1-205ENST00000519542 PLEKHG5O94827 1062 aa9.86□□□□□ -0.83
GABRA1-205ENST00000519542 PLCD3Q8N3E9 789 aa9.85□□□□□ -0.83
GABRA1-205ENST00000519542 CCDC61Q9Y6R9 512 aa9.84□□□□□ -0.83
GABRA1-205ENST00000519542 RASEFQ8IZ41 740 aa9.83□□□□□ -0.84
GABRA1-205ENST00000519542 TSPYL2Q9H2G4 693 aaPredicted RBP9.83□□□□□ -0.84
GABRA1-205ENST00000519542 NUBP1P53384 320 aa9.8□□□□□ -0.84
GABRA1-205ENST00000519542 DCBLD2Q96PD2 775 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms