RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 THSD7AQ9UPZ6 1657 aa20.21■□□□□ 0.83
PDCD6-211ENST00000515587 TNS1Q9HBL0 1735 aaKnown RBP20.21■□□□□ 0.83
PDCD6-211ENST00000515587 PARP4Q9UKK3 1724 aaKnown RBP20.2■□□□□ 0.82
PDCD6-211ENST00000515587 IL2RBP14784 551 aa20.19■□□□□ 0.82
PDCD6-211ENST00000515587 RAPGEF4Q8WZA2 1011 aa20.19■□□□□ 0.82
PDCD6-211ENST00000515587 PPP1R1BQ9UD71 204 aaPredicted RBP20.19■□□□□ 0.82
PDCD6-211ENST00000515587 IGSF1Q8N6C5 1336 aa20.19■□□□□ 0.82
PDCD6-211ENST00000515587 SENP3-EIF4A1A0A087X0R7 540 aa20.18■□□□□ 0.82
PDCD6-211ENST00000515587 DCAF8L1A6NGE4 600 aa20.18■□□□□ 0.82
PDCD6-211ENST00000515587 U2SURPO15042 1029 aaKnown RBP20.18■□□□□ 0.82
PDCD6-211ENST00000515587 DIEXFQ68CQ4 756 aaKnown RBP20.18■□□□□ 0.82
PDCD6-211ENST00000515587 APBA3O96018 575 aa20.17■□□□□ 0.82
PDCD6-211ENST00000515587 TATP17735 454 aaPredicted RBP20.17■□□□□ 0.82
PDCD6-211ENST00000515587 ZNF784Q8NCA9 323 aaPredicted RBP20.17■□□□□ 0.82
PDCD6-211ENST00000515587 NCAPD2Q15021 1401 aa20.17■□□□□ 0.82
PDCD6-211ENST00000515587 LRRC37A3O60309 1634 aa20.16■□□□□ 0.82
PDCD6-211ENST00000515587 EXOC5O00471 708 aa20.15■□□□□ 0.82
PDCD6-211ENST00000515587 DDB1Q16531 1140 aa20.15■□□□□ 0.82
PDCD6-211ENST00000515587 SULT6B1Q6IMI4 303 aa20.15■□□□□ 0.82
PDCD6-211ENST00000515587 SPON1Q9HCB6 807 aa20.15■□□□□ 0.82
PDCD6-211ENST00000515587 PDE3BQ13370 1112 aa20.14■□□□□ 0.81
PDCD6-211ENST00000515587 KCNQ2O43526 872 aa20.13■□□□□ 0.81
PDCD6-211ENST00000515587 FAM196AQ6ZSG2 479 aa20.13■□□□□ 0.81
PDCD6-211ENST00000515587 MEGF6O75095 1541 aa20.12■□□□□ 0.81
PDCD6-211ENST00000515587 U2AF1L5P0DN76 240 aaPredicted RBP20.12■□□□□ 0.81
PDCD6-211ENST00000515587 U2AF1Q01081 240 aaKnown RBP eCLIP20.12■□□□□ 0.81
PDCD6-211ENST00000515587 OVOS2A0A0G2JMS6 1433 aa20.11■□□□□ 0.81
PDCD6-211ENST00000515587 TNS2Q63HR2 1409 aa20.11■□□□□ 0.81
PDCD6-211ENST00000515587 HMOX1P09601 288 aa20.11■□□□□ 0.81
PDCD6-211ENST00000515587 NBPF14Q5TI25 921 aa20.11■□□□□ 0.81
PDCD6-211ENST00000515587 KDRP35968 1356 aa20.1■□□□□ 0.81
PDCD6-211ENST00000515587 PLEKHG2Q9H7P9 1386 aa20.1■□□□□ 0.81
PDCD6-211ENST00000515587 WDR43Q15061 677 aaKnown RBP eCLIP20.1■□□□□ 0.81
PDCD6-211ENST00000515587 AEBP1Q8IUX7 1158 aa20.1■□□□□ 0.81
PDCD6-211ENST00000515587 ZCRB1Q8TBF4 217 aaKnown RBP20.1■□□□□ 0.81
PDCD6-211ENST00000515587 PKD1L3Q7Z443 1732 aa20.1■□□□□ 0.81
PDCD6-211ENST00000515587 SPG7Q9UQ90 795 aa20.09■□□□□ 0.81
PDCD6-211ENST00000515587 PLEKHO1Q53GL0 409 aaPredicted RBP20.07■□□□□ 0.8
PDCD6-211ENST00000515587 PNNQ9H307 717 aaKnown RBP20.07■□□□□ 0.8
PDCD6-211ENST00000515587 MRS2Q9HD23 443 aa20.07■□□□□ 0.8
PDCD6-211ENST00000515587 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.07■□□□□ 0.8
PDCD6-211ENST00000515587 FCHSD2O94868 740 aa20.06■□□□□ 0.8
PDCD6-211ENST00000515587 NEFMP07197 916 aa20.06■□□□□ 0.8
PDCD6-211ENST00000515587 C1QTNF8P60827 252 aa20.06■□□□□ 0.8
PDCD6-211ENST00000515587 AMOTQ4VCS5 1084 aa20.06■□□□□ 0.8
PDCD6-211ENST00000515587 NUP188Q5SRE5 1749 aa20.06■□□□□ 0.8
PDCD6-211ENST00000515587 DDX54Q8TDD1 881 aaKnown RBP20.06■□□□□ 0.8
PDCD6-211ENST00000515587 SHANK3Q9BYB0 1731 aa20.06■□□□□ 0.8
PDCD6-211ENST00000515587 RREB1Q92766 1687 aa20.06■□□□□ 0.8
PDCD6-211ENST00000515587 PCDH11XQ9BZA7 1347 aa20.05■□□□□ 0.8
PDCD6-211ENST00000515587 PCDH11YQ9BZA8 1340 aa20.05■□□□□ 0.8
PDCD6-211ENST00000515587 PRKAR2BP31323 418 aa20.03■□□□□ 0.8
PDCD6-211ENST00000515587 MARCH10Q8NA82 808 aaPredicted RBP20.03■□□□□ 0.8
PDCD6-211ENST00000515587 RSPH6AQ9H0K4 717 aa20.03■□□□□ 0.8
PDCD6-211ENST00000515587 KAT6BQ8WYB5 2073 aa20.03■□□□□ 0.8
PDCD6-211ENST00000515587 CCDC184Q52MB2 194 aa20.01■□□□□ 0.79
PDCD6-211ENST00000515587 C1orf141Q5JVX7 400 aa20.01■□□□□ 0.79
PDCD6-211ENST00000515587 ZNF530Q6P9A1 599 aaPredicted RBP20.01■□□□□ 0.79
PDCD6-211ENST00000515587 IFNL2Q8IZJ0 200 aa20■□□□□ 0.79
PDCD6-211ENST00000515587 MAPK8IP3Q9UPT6 1336 aa20■□□□□ 0.79
PDCD6-211ENST00000515587 CCER2I3L3R5 266 aa19.99■□□□□ 0.79
PDCD6-211ENST00000515587 GAS2L2Q8NHY3 880 aa19.99■□□□□ 0.79
PDCD6-211ENST00000515587 SBF2Q86WG5 1849 aa19.98■□□□□ 0.79
PDCD6-211ENST00000515587 PDGFDQ9GZP0 370 aaPredicted RBP19.98■□□□□ 0.79
PDCD6-211ENST00000515587 ADAMTS8Q9UP79 889 aa19.98■□□□□ 0.79
PDCD6-211ENST00000515587 UTRNP46939 3433 aa19.97■□□□□ 0.79
PDCD6-211ENST00000515587 CYP27B1O15528 508 aa19.97■□□□□ 0.79
PDCD6-211ENST00000515587 HSP90AB1P08238 724 aaKnown RBP19.97■□□□□ 0.79
PDCD6-211ENST00000515587 PHKG2P15735 406 aa19.97■□□□□ 0.79
PDCD6-211ENST00000515587 MIER1Q8N108 512 aa19.97■□□□□ 0.79
PDCD6-211ENST00000515587 BCL9O00512 1426 aa19.96■□□□□ 0.79
PDCD6-211ENST00000515587 MTHFSDQ2M296 383 aaKnown RBP19.96■□□□□ 0.79
PDCD6-211ENST00000515587 PNISRQ8TF01 805 aaKnown RBP19.96■□□□□ 0.79
PDCD6-211ENST00000515587 ANO8Q9HCE9 1232 aaPredicted RBP19.96■□□□□ 0.79
PDCD6-211ENST00000515587 DOT1LQ8TEK3 1739 aa19.96■□□□□ 0.79
PDCD6-211ENST00000515587 AKAP4Q5JQC9 854 aa19.95■□□□□ 0.78
PDCD6-211ENST00000515587 PHACTR3Q96KR7 559 aa19.95■□□□□ 0.78
PDCD6-211ENST00000515587 ZBTB7AO95365 584 aa19.94■□□□□ 0.78
PDCD6-211ENST00000515587 RUNDC1Q96C34 613 aa19.94■□□□□ 0.78
PDCD6-211ENST00000515587 PLEKHF1Q96S99 279 aa19.94■□□□□ 0.78
PDCD6-211ENST00000515587 VIRMAQ69YN4 1812 aaKnown RBP19.94■□□□□ 0.78
PDCD6-211ENST00000515587 NKX1-1Q15270 411 aaPredicted RBP19.93■□□□□ 0.78
PDCD6-211ENST00000515587 NHSQ6T4R5 1651 aa19.93■□□□□ 0.78
PDCD6-211ENST00000515587 PTGER2P43116 358 aa19.92■□□□□ 0.78
PDCD6-211ENST00000515587 CCDC146Q8IYE0 955 aa19.92■□□□□ 0.78
PDCD6-211ENST00000515587 DCAF5Q96JK2 942 aa19.92■□□□□ 0.78
PDCD6-211ENST00000515587 MAP3K5Q99683 1374 aa19.92■□□□□ 0.78
PDCD6-211ENST00000515587 DLG5Q8TDM6 1919 aa19.92■□□□□ 0.78
PDCD6-211ENST00000515587 SCN11AQ9UI33 1791 aa19.91■□□□□ 0.78
PDCD6-211ENST00000515587 ITGB4P16144 1822 aa19.91■□□□□ 0.78
PDCD6-211ENST00000515587 GNAT3A8MTJ3 354 aa19.91■□□□□ 0.78
PDCD6-211ENST00000515587 FAM9BQ8IZU0 186 aa19.91■□□□□ 0.78
PDCD6-211ENST00000515587 ACSBG1Q96GR2 724 aa19.91■□□□□ 0.78
PDCD6-211ENST00000515587 NFE2L2Q16236 605 aa19.9■□□□□ 0.78
PDCD6-211ENST00000515587 SYTL4Q96C24 671 aaPredicted RBP19.9■□□□□ 0.78
PDCD6-211ENST00000515587 SYT17Q9BSW7 474 aa19.9■□□□□ 0.78
PDCD6-211ENST00000515587 FHDC1Q9C0D6 1143 aaPredicted RBP19.9■□□□□ 0.78
PDCD6-211ENST00000515587 ATF5Q9Y2D1 282 aaPredicted RBP19.9■□□□□ 0.78
PDCD6-211ENST00000515587 TOGARAM1Q9Y4F4 1720 aa19.9■□□□□ 0.78
PDCD6-211ENST00000515587 RTF1Q92541 710 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms