RNA–Protein interactions for RNA: ENST00000497739.1

PTPN3-206, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 3

Gene PTPN3, Length 781 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-206ENST00000497739 OVOS2Q6IE36 1432 aa13.45□□□□□ -0.26
PTPN3-206ENST00000497739 SRPK2P78362 688 aaKnown RBP13.44□□□□□ -0.26
PTPN3-206ENST00000497739 NBPF14Q5TI25 921 aa13.44□□□□□ -0.26
PTPN3-206ENST00000497739 PTF1AQ7RTS3 328 aa13.44□□□□□ -0.26
PTPN3-206ENST00000497739 CARD11Q9BXL7 1154 aa13.44□□□□□ -0.26
PTPN3-206ENST00000497739 STK25O00506 426 aa13.43□□□□□ -0.26
PTPN3-206ENST00000497739 CRB1P82279 1406 aa13.43□□□□□ -0.26
PTPN3-206ENST00000497739 PLCB2Q00722 1185 aa13.43□□□□□ -0.26
PTPN3-206ENST00000497739 PDGFDQ9GZP0 370 aaPredicted RBP13.43□□□□□ -0.26
PTPN3-206ENST00000497739 GOLGB1Q14789 3259 aaKnown RBP13.43□□□□□ -0.26
PTPN3-206ENST00000497739 SLIT3O75094 1523 aa13.43□□□□□ -0.26
PTPN3-206ENST00000497739 BCL9O00512 1426 aa13.42□□□□□ -0.26
PTPN3-206ENST00000497739 PLSCR1O15162 318 aa13.42□□□□□ -0.26
PTPN3-206ENST00000497739 GCP02774 474 aa13.42□□□□□ -0.26
PTPN3-206ENST00000497739 PTGER2P43116 358 aa13.42□□□□□ -0.26
PTPN3-206ENST00000497739 ATN1P54259 1190 aaPredicted RBP13.42□□□□□ -0.26
PTPN3-206ENST00000497739 EVA1CP58658 441 aa13.42□□□□□ -0.26
PTPN3-206ENST00000497739 MYOM1P52179 1685 aa13.41□□□□□ -0.26
PTPN3-206ENST00000497739 ABTB2Q8N961 1025 aa13.41□□□□□ -0.26
PTPN3-206ENST00000497739 AATKQ6ZMQ8 1374 aa13.41□□□□□ -0.26
PTPN3-206ENST00000497739 EVC2Q86UK5 1308 aa13.4□□□□□ -0.26
PTPN3-206ENST00000497739 PELP1Q8IZL8 1130 aaKnown RBP13.4□□□□□ -0.26
PTPN3-206ENST00000497739 PPP1R1BQ9UD71 204 aaPredicted RBP13.4□□□□□ -0.26
PTPN3-206ENST00000497739 STK24Q9Y6E0 443 aa13.4□□□□□ -0.26
PTPN3-206ENST00000497739 PPIP5K1Q6PFW1 1433 aa13.39□□□□□ -0.27
PTPN3-206ENST00000497739 SBF2Q86WG5 1849 aa13.39□□□□□ -0.27
PTPN3-206ENST00000497739 C11orf95C9JLR9 678 aaPredicted RBP13.39□□□□□ -0.27
PTPN3-206ENST00000497739 TIMELESSQ9UNS1 1208 aa13.39□□□□□ -0.27
PTPN3-206ENST00000497739 COL18A1P39060 1754 aa13.39□□□□□ -0.27
PTPN3-206ENST00000497739 DCBLD2Q96PD2 775 aa13.38□□□□□ -0.27
PTPN3-206ENST00000497739 WNK3Q9BYP7 1800 aa13.38□□□□□ -0.27
PTPN3-206ENST00000497739 USP6P35125 1406 aa13.38□□□□□ -0.27
PTPN3-206ENST00000497739 CEP350Q5VT06 3117 aa13.37□□□□□ -0.27
PTPN3-206ENST00000497739 BRD4O60885 1362 aaPredicted RBP13.37□□□□□ -0.27
PTPN3-206ENST00000497739 NLRP13Q86W25 1043 aa13.37□□□□□ -0.27
PTPN3-206ENST00000497739 MARCH10Q8NA82 808 aaPredicted RBP13.37□□□□□ -0.27
PTPN3-206ENST00000497739 ZNF784Q8NCA9 323 aaPredicted RBP13.37□□□□□ -0.27
PTPN3-206ENST00000497739 PIK3C2AO00443 1686 aa13.37□□□□□ -0.27
PTPN3-206ENST00000497739 CABP2Q9NPB3 220 aa13.36□□□□□ -0.27
PTPN3-206ENST00000497739 CPSF1Q10570 1443 aaKnown RBP13.36□□□□□ -0.27
PTPN3-206ENST00000497739 ZBTB7AO95365 584 aa13.35□□□□□ -0.27
PTPN3-206ENST00000497739 NKX1-1Q15270 411 aaPredicted RBP13.35□□□□□ -0.27
PTPN3-206ENST00000497739 DDB1Q16531 1140 aa13.35□□□□□ -0.27
PTPN3-206ENST00000497739 TRIM35Q9UPQ4 493 aa13.35□□□□□ -0.27
PTPN3-206ENST00000497739 AXIN2Q9Y2T1 843 aa13.35□□□□□ -0.27
PTPN3-206ENST00000497739 PAPPAQ13219 1627 aa13.34□□□□□ -0.27
PTPN3-206ENST00000497739 WDR17Q8IZU2 1322 aa13.34□□□□□ -0.27
PTPN3-206ENST00000497739 EFCAB3Q8N7B9 438 aa13.33□□□□□ -0.28
PTPN3-206ENST00000497739 BBXQ8WY36 941 aaPredicted RBP13.33□□□□□ -0.28
PTPN3-206ENST00000497739 FHDC1Q9C0D6 1143 aaPredicted RBP13.32□□□□□ -0.28
PTPN3-206ENST00000497739 NFAT5O94916 1531 aa13.32□□□□□ -0.28
PTPN3-206ENST00000497739 TXNRD1Q16881 649 aa13.31□□□□□ -0.28
PTPN3-206ENST00000497739 TOM1L2Q6ZVM7 507 aa13.31□□□□□ -0.28
PTPN3-206ENST00000497739 SYT17Q9BSW7 474 aa13.31□□□□□ -0.28
PTPN3-206ENST00000497739 MAP3K5Q99683 1374 aa13.31□□□□□ -0.28
PTPN3-206ENST00000497739 SBNO2Q9Y2G9 1366 aa13.31□□□□□ -0.28
PTPN3-206ENST00000497739 TNS2Q63HR2 1409 aa13.3□□□□□ -0.28
PTPN3-206ENST00000497739 NLRP6P59044 892 aa13.3□□□□□ -0.28
PTPN3-206ENST00000497739 SLC15A2Q16348 729 aa13.3□□□□□ -0.28
PTPN3-206ENST00000497739 ARHGEF25Q86VW2 580 aa13.3□□□□□ -0.28
PTPN3-206ENST00000497739 CDCA7Q9BWT1 371 aaPredicted RBP13.3□□□□□ -0.28
PTPN3-206ENST00000497739 CABP1Q9NZU7 370 aa13.3□□□□□ -0.28
PTPN3-206ENST00000497739 ABCC6O95255 1503 aa13.29□□□□□ -0.28
PTPN3-206ENST00000497739 CARD10Q9BWT7 1032 aa13.29□□□□□ -0.28
PTPN3-206ENST00000497739 AKAP12Q02952 1782 aa13.29□□□□□ -0.28
PTPN3-206ENST00000497739 USP47Q96K76 1375 aa13.29□□□□□ -0.28
PTPN3-206ENST00000497739 NHSQ6T4R5 1651 aa13.28□□□□□ -0.28
PTPN3-206ENST00000497739 ZBTB7CA1YPR0 619 aa13.28□□□□□ -0.28
PTPN3-206ENST00000497739 TMC1Q8TDI8 760 aa13.28□□□□□ -0.28
PTPN3-206ENST00000497739 MTFR1LQ9H019 292 aa13.28□□□□□ -0.28
PTPN3-206ENST00000497739 CDCA8Q53HL2 280 aa13.27□□□□□ -0.29
PTPN3-206ENST00000497739 STK32BQ9NY57 414 aa13.27□□□□□ -0.29
PTPN3-206ENST00000497739 ST20-MTHFSA0A0A6YYL1 179 aa13.26□□□□□ -0.29
PTPN3-206ENST00000497739 SOX12O15370 315 aa13.26□□□□□ -0.29
PTPN3-206ENST00000497739 TMF1P82094 1093 aa13.26□□□□□ -0.29
PTPN3-206ENST00000497739 HDGFL2Q7Z4V5 671 aaPredicted RBP13.26□□□□□ -0.29
PTPN3-206ENST00000497739 MFRPQ9BY79 579 aa13.26□□□□□ -0.29
PTPN3-206ENST00000497739 TTC21BQ7Z4L5 1316 aa13.25□□□□□ -0.29
PTPN3-206ENST00000497739 C1QTNF8P60827 252 aa13.25□□□□□ -0.29
PTPN3-206ENST00000497739 KTN1Q86UP2 1357 aaKnown RBP13.24□□□□□ -0.29
PTPN3-206ENST00000497739 CCDC7Q96M83 1385 aa13.24□□□□□ -0.29
PTPN3-206ENST00000497739 ZNF827Q17R98 1081 aa13.24□□□□□ -0.29
PTPN3-206ENST00000497739 IER5LQ5T953 404 aa13.24□□□□□ -0.29
PTPN3-206ENST00000497739 FBXO22Q8NEZ5 403 aa13.24□□□□□ -0.29
PTPN3-206ENST00000497739 TERF2IPQ9NYB0 399 aa13.24□□□□□ -0.29
PTPN3-206ENST00000497739 RGPD5Q99666 1765 aa13.23□□□□□ -0.29
PTPN3-206ENST00000497739 POTEFA5A3E0 1075 aa13.23□□□□□ -0.29
PTPN3-206ENST00000497739 IRX5P78411 483 aaPredicted RBP13.23□□□□□ -0.29
PTPN3-206ENST00000497739 MKRN3Q13064 507 aaKnown RBP13.23□□□□□ -0.29
PTPN3-206ENST00000497739 MON2Q7Z3U7 1717 aa13.22□□□□□ -0.29
PTPN3-206ENST00000497739 USP54Q70EL1 1684 aa13.22□□□□□ -0.29
PTPN3-206ENST00000497739 SENP3-EIF4A1A0A087X0R7 540 aa13.22□□□□□ -0.29
PTPN3-206ENST00000497739 KCNH5Q8NCM2 988 aa13.22□□□□□ -0.29
PTPN3-206ENST00000497739 ARXQ96QS3 562 aa13.22□□□□□ -0.29
PTPN3-206ENST00000497739 LRRC4BQ9NT99 713 aa13.22□□□□□ -0.29
PTPN3-206ENST00000497739 COL24A1Q17RW2 1714 aa13.22□□□□□ -0.29
PTPN3-206ENST00000497739 ERBB3P21860 1342 aa13.21□□□□□ -0.29
PTPN3-206ENST00000497739 TTC21AQ8NDW8 1320 aa13.21□□□□□ -0.29
PTPN3-206ENST00000497739 EXOC5O00471 708 aa13.21□□□□□ -0.29
PTPN3-206ENST00000497739 GTPBP6O43824 516 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms