RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 PSMG3-AS1Q96PY0 264 aa7.38□□□□□ -1.23
PSPC1-205ENST00000497722 MAP3K10Q02779 954 aa7.37□□□□□ -1.23
PSPC1-205ENST00000497722 NR1H3Q13133 447 aa7.37□□□□□ -1.23
PSPC1-205ENST00000497722 PLA2G4EQ3MJ16 856 aa7.37□□□□□ -1.23
PSPC1-205ENST00000497722 SPOCK3Q9BQ16 436 aa7.37□□□□□ -1.23
PSPC1-205ENST00000497722 NDUFB9Q9Y6M9 179 aa7.37□□□□□ -1.23
PSPC1-205ENST00000497722 TTLL8A6PVC2 850 aa7.36□□□□□ -1.23
PSPC1-205ENST00000497722 GIGYF1O75420 1035 aaPredicted RBP7.36□□□□□ -1.23
PSPC1-205ENST00000497722 GALNT6Q8NCL4 622 aa7.36□□□□□ -1.23
PSPC1-205ENST00000497722 AGBL1Q96MI9 1066 aa7.36□□□□□ -1.23
PSPC1-205ENST00000497722 CCDC155Q8N6L0 562 aa7.35□□□□□ -1.23
PSPC1-205ENST00000497722 PHF20L1A8MW92 1017 aa7.34□□□□□ -1.23
PSPC1-205ENST00000497722 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.34□□□□□ -1.23
PSPC1-205ENST00000497722 ADH1AP07327 375 aa7.34□□□□□ -1.23
PSPC1-205ENST00000497722 KRTAP9-2Q9BYQ4 174 aa7.34□□□□□ -1.23
PSPC1-205ENST00000497722 PCDHB9Q9Y5E1 797 aa7.34□□□□□ -1.23
PSPC1-205ENST00000497722 K7ELQ4 463 aaPredicted RBP7.33□□□□□ -1.24
PSPC1-205ENST00000497722 CTSOP43234 321 aaPredicted RBP7.33□□□□□ -1.24
PSPC1-205ENST00000497722 RAB15P59190 212 aa7.33□□□□□ -1.24
PSPC1-205ENST00000497722 MCCD1P59942 119 aaPredicted RBP7.33□□□□□ -1.24
PSPC1-205ENST00000497722 IRF5Q13568 498 aa7.33□□□□□ -1.24
PSPC1-205ENST00000497722 SV2AQ7L0J3 742 aa7.33□□□□□ -1.24
PSPC1-205ENST00000497722 DCAF5Q96JK2 942 aa7.33□□□□□ -1.24
PSPC1-205ENST00000497722 ENAMQ9NRM1 1142 aa7.33□□□□□ -1.24
PSPC1-205ENST00000497722 CDC14CA4D256 554 aa7.32□□□□□ -1.24
PSPC1-205ENST00000497722 ADAMTS2O95450 1211 aa7.32□□□□□ -1.24
PSPC1-205ENST00000497722 ITGA6P23229 1130 aa7.32□□□□□ -1.24
PSPC1-205ENST00000497722 PTGIRP43119 386 aa7.32□□□□□ -1.24
PSPC1-205ENST00000497722 RELBQ01201 579 aa7.32□□□□□ -1.24
PSPC1-205ENST00000497722 CCDC125Q86Z20 511 aa7.32□□□□□ -1.24
PSPC1-205ENST00000497722 Q8N3U1 123 aa7.32□□□□□ -1.24
PSPC1-205ENST00000497722 INSM2Q96T92 566 aaPredicted RBP7.32□□□□□ -1.24
PSPC1-205ENST00000497722 TBC1D2BQ9UPU7 963 aa7.32□□□□□ -1.24
PSPC1-205ENST00000497722 APBB1O00213 710 aa7.31□□□□□ -1.24
PSPC1-205ENST00000497722 PROCP04070 461 aa7.31□□□□□ -1.24
PSPC1-205ENST00000497722 ERVK-9P63128 1117 aa7.31□□□□□ -1.24
PSPC1-205ENST00000497722 FIGNL2A6NMB9 653 aa7.3□□□□□ -1.24
PSPC1-205ENST00000497722 FOXD4L5Q5VV16 416 aaPredicted RBP7.3□□□□□ -1.24
PSPC1-205ENST00000497722 VWA5B2Q8N398 1253 aa7.3□□□□□ -1.24
PSPC1-205ENST00000497722 RNF217Q8TC41 542 aa7.3□□□□□ -1.24
PSPC1-205ENST00000497722 ZNF395Q9H8N7 513 aaPredicted RBP7.3□□□□□ -1.24
PSPC1-205ENST00000497722 CYLDQ9NQC7 956 aa7.3□□□□□ -1.24
PSPC1-205ENST00000497722 KRTAP9-6A0A140TA67 174 aa7.29□□□□□ -1.24
PSPC1-205ENST00000497722 SLC35F4A4IF30 521 aa7.29□□□□□ -1.24
PSPC1-205ENST00000497722 SRSF11Q05519 484 aaKnown RBP7.29□□□□□ -1.24
PSPC1-205ENST00000497722 LYPD4Q6UWN0 246 aa7.29□□□□□ -1.24
PSPC1-205ENST00000497722 PODNQ7Z5L7 613 aa7.29□□□□□ -1.24
PSPC1-205ENST00000497722 SENP3-EIF4A1A0A087X0R7 540 aa7.28□□□□□ -1.24
PSPC1-205ENST00000497722 TRAK2O60296 914 aa7.28□□□□□ -1.24
PSPC1-205ENST00000497722 SCTRP47872 440 aa7.28□□□□□ -1.24
PSPC1-205ENST00000497722 RNF20Q5VTR2 975 aa7.28□□□□□ -1.24
PSPC1-205ENST00000497722 PHTF2Q8N3S3 785 aa7.28□□□□□ -1.24
PSPC1-205ENST00000497722 ZNF592Q92610 1267 aa7.28□□□□□ -1.24
PSPC1-205ENST00000497722 CEP126Q9P2H0 1117 aa7.28□□□□□ -1.24
PSPC1-205ENST00000497722 ITGB2P05107 769 aa7.27□□□□□ -1.25
PSPC1-205ENST00000497722 CELA2BP08218 269 aaPredicted RBP7.27□□□□□ -1.25
PSPC1-205ENST00000497722 MCM6Q14566 821 aa7.27□□□□□ -1.25
PSPC1-205ENST00000497722 CC2D2BQ6DHV5 1058 aa7.27□□□□□ -1.25
PSPC1-205ENST00000497722 ZNF330Q9Y3S2 320 aaPredicted RBP7.27□□□□□ -1.25
PSPC1-205ENST00000497722 RNF144AP50876 292 aaPredicted RBP7.26□□□□□ -1.25
PSPC1-205ENST00000497722 BEND7Q8N7W2 519 aaPredicted RBP7.26□□□□□ -1.25
PSPC1-205ENST00000497722 CCDC85AQ96PX6 553 aaPredicted RBP7.26□□□□□ -1.25
PSPC1-205ENST00000497722 OSBPL3Q9H4L5 887 aa7.26□□□□□ -1.25
PSPC1-205ENST00000497722 CHIC2Q9UKJ5 165 aa7.26□□□□□ -1.25
PSPC1-205ENST00000497722 ATP5J2-PTCD1G3V325 749 aa7.25□□□□□ -1.25
PSPC1-205ENST00000497722 POLMQ9NP87 494 aaPredicted RBP7.25□□□□□ -1.25
PSPC1-205ENST00000497722 KRTAP1-3Q8IUG1 177 aa7.24□□□□□ -1.25
PSPC1-205ENST00000497722 TRIM52Q96A61 297 aa7.24□□□□□ -1.25
PSPC1-205ENST00000497722 CDCA7Q9BWT1 371 aaPredicted RBP7.24□□□□□ -1.25
PSPC1-205ENST00000497722 GDPD2Q9HCC8 539 aa7.24□□□□□ -1.25
PSPC1-205ENST00000497722 PCDHB11Q9Y5F2 797 aa7.24□□□□□ -1.25
PSPC1-205ENST00000497722 A0A1W2PRU2 124 aa7.23□□□□□ -1.25
PSPC1-205ENST00000497722 GPC1P35052 558 aa7.23□□□□□ -1.25
PSPC1-205ENST00000497722 TSGA10IPQ3SY00 556 aa7.23□□□□□ -1.25
PSPC1-205ENST00000497722 CNTNAP5Q8WYK1 1306 aa7.23□□□□□ -1.25
PSPC1-205ENST00000497722 CLN3Q13286 438 aa7.22□□□□□ -1.25
PSPC1-205ENST00000497722 GRIP2Q9C0E4 1043 aa7.22□□□□□ -1.25
PSPC1-205ENST00000497722 PRM3Q9NNZ6 103 aa7.22□□□□□ -1.25
PSPC1-205ENST00000497722 HRH3Q9Y5N1 445 aa7.22□□□□□ -1.25
PSPC1-205ENST00000497722 BAG6P46379 1132 aa7.21□□□□□ -1.26
PSPC1-205ENST00000497722 EIF4G2P78344 907 aaKnown RBP eCLIP7.21□□□□□ -1.26
PSPC1-205ENST00000497722 VAC14Q08AM6 782 aa7.21□□□□□ -1.26
PSPC1-205ENST00000497722 LYSMD3Q7Z3D4 306 aa7.21□□□□□ -1.26
PSPC1-205ENST00000497722 CYP2U1Q7Z449 544 aa7.21□□□□□ -1.26
PSPC1-205ENST00000497722 COG6Q9Y2V7 657 aa7.21□□□□□ -1.26
PSPC1-205ENST00000497722 NEDD1Q8NHV4 660 aa7.2□□□□□ -1.26
PSPC1-205ENST00000497722 CUEDC1Q9NWM3 386 aaPredicted RBP7.2□□□□□ -1.26
PSPC1-205ENST00000497722 ABL2P42684 1182 aa7.19□□□□□ -1.26
PSPC1-205ENST00000497722 GAS6Q14393 721 aa7.19□□□□□ -1.26
PSPC1-205ENST00000497722 WASHC4Q2M389 1173 aa7.19□□□□□ -1.26
PSPC1-205ENST00000497722 PRICKLE2Q7Z3G6 844 aa7.19□□□□□ -1.26
PSPC1-205ENST00000497722 SPATA31C2B4DYI2 1134 aa7.18□□□□□ -1.26
PSPC1-205ENST00000497722 MEN1O00255 615 aa7.18□□□□□ -1.26
PSPC1-205ENST00000497722 GNRH1P01148 92 aa7.18□□□□□ -1.26
PSPC1-205ENST00000497722 IL2RAP01589 272 aa7.18□□□□□ -1.26
PSPC1-205ENST00000497722 ARHGEF10LQ9HCE6 1279 aa7.18□□□□□ -1.26
PSPC1-205ENST00000497722 MBIPQ9NS73 344 aa7.18□□□□□ -1.26
PSPC1-205ENST00000497722 BCRP11274 1271 aa7.17□□□□□ -1.26
PSPC1-205ENST00000497722 RHOQP17081 205 aa7.17□□□□□ -1.26
PSPC1-205ENST00000497722 XAGE2Q96GT9 111 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms