RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 GPBP1L1Q9HC44 474 aaPredicted RBP9.34□□□□□ -0.91
GAPVD1-218ENST00000495588 SENP3-EIF4A1A0A087X0R7 540 aa9.33□□□□□ -0.92
GAPVD1-218ENST00000495588 CELA2BP08218 269 aaPredicted RBP9.33□□□□□ -0.92
GAPVD1-218ENST00000495588 RTL5Q5HYW3 569 aaPredicted RBP9.33□□□□□ -0.92
GAPVD1-218ENST00000495588 INTS6LQ5JSJ4 861 aaKnown RBP9.33□□□□□ -0.92
GAPVD1-218ENST00000495588 ZNF395Q9H8N7 513 aaPredicted RBP9.33□□□□□ -0.92
GAPVD1-218ENST00000495588 XP32Q5T750 250 aa9.32□□□□□ -0.92
GAPVD1-218ENST00000495588 PLA2G4EQ3MJ16 856 aa9.31□□□□□ -0.92
GAPVD1-218ENST00000495588 PODNQ7Z5L7 613 aa9.31□□□□□ -0.92
GAPVD1-218ENST00000495588 FKBPLQ9UIM3 349 aa9.31□□□□□ -0.92
GAPVD1-218ENST00000495588 ABCC8Q09428 1581 aa9.3□□□□□ -0.92
GAPVD1-218ENST00000495588 FANCD2Q9BXW9 1451 aa9.3□□□□□ -0.92
GAPVD1-218ENST00000495588 ADAM23O75077 832 aa9.3□□□□□ -0.92
GAPVD1-218ENST00000495588 KIF21AQ7Z4S6 1674 aa9.29□□□□□ -0.92
GAPVD1-218ENST00000495588 CLK2P49760 499 aaKnown RBP9.29□□□□□ -0.92
GAPVD1-218ENST00000495588 GAS6Q14393 721 aa9.29□□□□□ -0.92
GAPVD1-218ENST00000495588 NBPF20Q3BBV1 942 aa9.29□□□□□ -0.92
GAPVD1-218ENST00000495588 DCAF5Q96JK2 942 aa9.29□□□□□ -0.92
GAPVD1-218ENST00000495588 SPOCK3Q9BQ16 436 aa9.29□□□□□ -0.92
GAPVD1-218ENST00000495588 PDS5BQ9NTI5 1447 aa9.29□□□□□ -0.92
GAPVD1-218ENST00000495588 ZC3H4Q9UPT8 1303 aaKnown RBP9.29□□□□□ -0.92
GAPVD1-218ENST00000495588 ADH1AP07327 375 aa9.28□□□□□ -0.92
GAPVD1-218ENST00000495588 ERICH6Q7L0X2 663 aa9.28□□□□□ -0.92
GAPVD1-218ENST00000495588 LYSMD3Q7Z3D4 306 aa9.28□□□□□ -0.92
GAPVD1-218ENST00000495588 BEND7Q8N7W2 519 aaPredicted RBP9.28□□□□□ -0.92
GAPVD1-218ENST00000495588 GALNT6Q8NCL4 622 aa9.28□□□□□ -0.92
GAPVD1-218ENST00000495588 MBIPQ9NS73 344 aa9.28□□□□□ -0.92
GAPVD1-218ENST00000495588 PTK2Q05397 1052 aa9.27□□□□□ -0.93
GAPVD1-218ENST00000495588 CTDSPL2Q05D32 466 aa9.27□□□□□ -0.93
GAPVD1-218ENST00000495588 FOXD4L5Q5VV16 416 aaPredicted RBP9.27□□□□□ -0.93
GAPVD1-218ENST00000495588 FOXR1Q6PIV2 292 aa9.27□□□□□ -0.93
GAPVD1-218ENST00000495588 CNTNAP5Q8WYK1 1306 aa9.27□□□□□ -0.93
GAPVD1-218ENST00000495588 ZNF784Q8NCA9 323 aaPredicted RBP9.26□□□□□ -0.93
GAPVD1-218ENST00000495588 NEDD1Q8NHV4 660 aa9.26□□□□□ -0.93
GAPVD1-218ENST00000495588 GMCL1Q96IK5 515 aa9.26□□□□□ -0.93
GAPVD1-218ENST00000495588 TMPRSS4Q9NRS4 437 aa9.26□□□□□ -0.93
GAPVD1-218ENST00000495588 CUEDC1Q9NWM3 386 aaPredicted RBP9.26□□□□□ -0.93
GAPVD1-218ENST00000495588 CEP164Q9UPV0 1460 aa9.26□□□□□ -0.93
GAPVD1-218ENST00000495588 PTGIRP43119 386 aa9.25□□□□□ -0.93
GAPVD1-218ENST00000495588 RSPH6AQ9H0K4 717 aa9.25□□□□□ -0.93
GAPVD1-218ENST00000495588 TIMELESSQ9UNS1 1208 aa9.25□□□□□ -0.93
GAPVD1-218ENST00000495588 WRNQ14191 1432 aaPredicted RBP eCLIP9.24□□□□□ -0.93
GAPVD1-218ENST00000495588 RAB15P59190 212 aa9.24□□□□□ -0.93
GAPVD1-218ENST00000495588 ADAM32Q8TC27 787 aa9.24□□□□□ -0.93
GAPVD1-218ENST00000495588 ZNF837Q96EG3 531 aaPredicted RBP9.24□□□□□ -0.93
GAPVD1-218ENST00000495588 GPSM3Q9Y4H4 160 aa9.24□□□□□ -0.93
GAPVD1-218ENST00000495588 IGF1RP08069 1367 aa9.24□□□□□ -0.93
GAPVD1-218ENST00000495588 ERCC6Q03468 1493 aa9.23□□□□□ -0.93
GAPVD1-218ENST00000495588 BCRP11274 1271 aa9.23□□□□□ -0.93
GAPVD1-218ENST00000495588 TRIM22Q8IYM9 498 aa9.23□□□□□ -0.93
GAPVD1-218ENST00000495588 LRRN4Q8WUT4 740 aa9.23□□□□□ -0.93
GAPVD1-218ENST00000495588 DDRGK1Q96HY6 314 aa9.23□□□□□ -0.93
GAPVD1-218ENST00000495588 FAM117AQ9C073 453 aa9.23□□□□□ -0.93
GAPVD1-218ENST00000495588 SYNJ1O43426 1573 aa9.23□□□□□ -0.93
GAPVD1-218ENST00000495588 CUX1P39880 1505 aa9.22□□□□□ -0.93
GAPVD1-218ENST00000495588 PRICKLE2Q7Z3G6 844 aa9.22□□□□□ -0.93
GAPVD1-218ENST00000495588 IL27Q8NEV9 243 aa9.22□□□□□ -0.93
GAPVD1-218ENST00000495588 TRIM52Q96A61 297 aa9.22□□□□□ -0.93
GAPVD1-218ENST00000495588 POLR3EQ9NVU0 708 aa9.22□□□□□ -0.93
GAPVD1-218ENST00000495588 GPR25O00155 361 aa9.21□□□□□ -0.94
GAPVD1-218ENST00000495588 PROCP04070 461 aa9.21□□□□□ -0.94
GAPVD1-218ENST00000495588 NR6A1Q15406 480 aa9.21□□□□□ -0.94
GAPVD1-218ENST00000495588 MRC2Q9UBG0 1479 aa9.21□□□□□ -0.94
GAPVD1-218ENST00000495588 URB2Q14146 1524 aaKnown RBP9.21□□□□□ -0.94
GAPVD1-218ENST00000495588 TOP2BQ02880 1626 aa9.2□□□□□ -0.94
GAPVD1-218ENST00000495588 ERVH48-1M5A8F1 160 aa9.2□□□□□ -0.94
GAPVD1-218ENST00000495588 LILRA1O75019 489 aa9.2□□□□□ -0.94
GAPVD1-218ENST00000495588 ITGB2P05107 769 aa9.2□□□□□ -0.94
GAPVD1-218ENST00000495588 RHOQP17081 205 aa9.2□□□□□ -0.94
GAPVD1-218ENST00000495588 ADD1P35611 737 aaKnown RBP9.2□□□□□ -0.94
GAPVD1-218ENST00000495588 RNF144AP50876 292 aaPredicted RBP9.2□□□□□ -0.94
GAPVD1-218ENST00000495588 RIPOR1Q6ZS17 1223 aa9.2□□□□□ -0.94
GAPVD1-218ENST00000495588 OCSTAMPQ9BR26 566 aa9.2□□□□□ -0.94
GAPVD1-218ENST00000495588 DNMBPQ6XZF7 1577 aa9.2□□□□□ -0.94
GAPVD1-218ENST00000495588 BIVM-ERCC5R4GMW8 1640 aa9.2□□□□□ -0.94
GAPVD1-218ENST00000495588 DZIP3Q86Y13 1208 aaKnown RBP9.19□□□□□ -0.94
GAPVD1-218ENST00000495588 KDF1Q8NAX2 398 aaPredicted RBP9.19□□□□□ -0.94
GAPVD1-218ENST00000495588 PNMA1Q8ND90 353 aa9.19□□□□□ -0.94
GAPVD1-218ENST00000495588 TRERF1Q96PN7 1200 aa9.19□□□□□ -0.94
GAPVD1-218ENST00000495588 GOPCQ9HD26 462 aa9.19□□□□□ -0.94
GAPVD1-218ENST00000495588 TOPBP1Q92547 1522 aa9.19□□□□□ -0.94
GAPVD1-218ENST00000495588 THOC2Q8NI27 1593 aaKnown RBP9.19□□□□□ -0.94
GAPVD1-218ENST00000495588 H7C1W4 665 aa9.18□□□□□ -0.94
GAPVD1-218ENST00000495588 K7ELQ4 463 aaPredicted RBP9.18□□□□□ -0.94
GAPVD1-218ENST00000495588 LRRC4BQ9NT99 713 aa9.18□□□□□ -0.94
GAPVD1-218ENST00000495588 NSFL1CQ9UNZ2 370 aaKnown RBP9.18□□□□□ -0.94
GAPVD1-218ENST00000495588 WDR62O43379 1518 aa9.17□□□□□ -0.94
GAPVD1-218ENST00000495588 DBN1Q16643 649 aa9.17□□□□□ -0.94
GAPVD1-218ENST00000495588 ACDQ96AP0 544 aa9.17□□□□□ -0.94
GAPVD1-218ENST00000495588 GTPBP3Q969Y2 492 aaKnown RBP9.16□□□□□ -0.94
GAPVD1-218ENST00000495588 MX2P20592 715 aa9.15□□□□□ -0.94
GAPVD1-218ENST00000495588 GPC1P35052 558 aa9.15□□□□□ -0.94
GAPVD1-218ENST00000495588 PPP2R2DQ66LE6 453 aa9.15□□□□□ -0.94
GAPVD1-218ENST00000495588 CYLDQ9NQC7 956 aa9.15□□□□□ -0.94
GAPVD1-218ENST00000495588 DYRK1BQ9Y463 629 aa9.15□□□□□ -0.94
GAPVD1-218ENST00000495588 FGD5Q6ZNL6 1462 aa9.15□□□□□ -0.95
GAPVD1-218ENST00000495588 ESPNB1AK53 854 aa9.14□□□□□ -0.95
GAPVD1-218ENST00000495588 SEPT12Q8IYM1 358 aa9.14□□□□□ -0.95
GAPVD1-218ENST00000495588 ATP5J2-PTCD1G3V325 749 aa9.13□□□□□ -0.95
GAPVD1-218ENST00000495588 GAS2L1Q99501 681 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms