RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 AEBP2Q6ZN18 517 aaPredicted RBP28.97■■■□□ 2.23
GAPVD1-218ENST00000495588 CHIC1Q5VXU3 224 aa27.26■■□□□ 1.95
GAPVD1-218ENST00000495588 SENP3Q9H4L4 574 aaPredicted RBP24.86■■□□□ 1.57
GAPVD1-218ENST00000495588 PHF23Q9BUL5 403 aaPredicted RBP24.45■■□□□ 1.5
GAPVD1-218ENST00000495588 FOXD1Q16676 465 aa23.15■■□□□ 1.3
GAPVD1-218ENST00000495588 MSH5O43196 834 aa21.87■■□□□ 1.09
GAPVD1-218ENST00000495588 POTEDQ86YR6 584 aa21.8■■□□□ 1.08
GAPVD1-218ENST00000495588 PLPPR3Q6T4P5 718 aa21.68■■□□□ 1.06
GAPVD1-218ENST00000495588 PIAS4Q8N2W9 510 aaPredicted RBP21.61■■□□□ 1.05
GAPVD1-218ENST00000495588 PPP6R1Q9UPN7 881 aa21.37■■□□□ 1.01
GAPVD1-218ENST00000495588 ADRA2BP18089 450 aa21.31■■□□□ 1
GAPVD1-218ENST00000495588 MAPK8IP2Q13387 824 aaPredicted RBP19.65■□□□□ 0.74
GAPVD1-218ENST00000495588 DMRT2Q9Y5R5 561 aa19.63■□□□□ 0.73
GAPVD1-218ENST00000495588 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
GAPVD1-218ENST00000495588 CACNB1Q02641 598 aaPredicted RBP18.95■□□□□ 0.62
GAPVD1-218ENST00000495588 PPP4R3CPQ6ZMV5 832 aa18.94■□□□□ 0.62
GAPVD1-218ENST00000495588 DCAF8L1A6NGE4 600 aa18.91■□□□□ 0.62
GAPVD1-218ENST00000495588 HOXD11P31277 338 aaPredicted RBP18.78■□□□□ 0.6
GAPVD1-218ENST00000495588 CNKSR2Q8WXI2 1034 aa18.68■□□□□ 0.58
GAPVD1-218ENST00000495588 RNF216Q9NWF9 866 aaPredicted RBP18.59■□□□□ 0.57
GAPVD1-218ENST00000495588 RNF39Q9H2S5 420 aa18.58■□□□□ 0.56
GAPVD1-218ENST00000495588 C1QBPQ07021 282 aaKnown RBP18.33■□□□□ 0.52
GAPVD1-218ENST00000495588 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
GAPVD1-218ENST00000495588 NCBP3Q53F19 620 aaKnown RBP18.18■□□□□ 0.5
GAPVD1-218ENST00000495588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.96■□□□□ 0.47
GAPVD1-218ENST00000495588 NPM3O75607 178 aaKnown RBP17.84■□□□□ 0.45
GAPVD1-218ENST00000495588 U3KPZ7 1027 aaPredicted RBP17.48■□□□□ 0.39
GAPVD1-218ENST00000495588 CAPN15O75808 1086 aa17.37■□□□□ 0.37
GAPVD1-218ENST00000495588 SPINK5Q9NQ38 1064 aaPredicted RBP17.32■□□□□ 0.36
GAPVD1-218ENST00000495588 DSG3P32926 999 aa17.28■□□□□ 0.36
GAPVD1-218ENST00000495588 KCNA4P22459 653 aa17.21■□□□□ 0.35
GAPVD1-218ENST00000495588 SLC4A2P04920 1241 aa17.09■□□□□ 0.33
GAPVD1-218ENST00000495588 APLP2Q06481 763 aa17.08■□□□□ 0.32
GAPVD1-218ENST00000495588 POTEHQ6S545 545 aa17.06■□□□□ 0.32
GAPVD1-218ENST00000495588 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
GAPVD1-218ENST00000495588 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
GAPVD1-218ENST00000495588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.97■□□□□ 0.31
GAPVD1-218ENST00000495588 HNRNPUL2Q1KMD3 747 aaKnown RBP16.97■□□□□ 0.31
GAPVD1-218ENST00000495588 ABCB7O75027 752 aa16.91■□□□□ 0.3
GAPVD1-218ENST00000495588 SAMD1Q6SPF0 538 aaPredicted RBP16.83■□□□□ 0.28
GAPVD1-218ENST00000495588 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.24
GAPVD1-218ENST00000495588 MYCNP04198 464 aaPredicted RBP16.56■□□□□ 0.24
GAPVD1-218ENST00000495588 POLA2Q14181 598 aa16.47■□□□□ 0.23
GAPVD1-218ENST00000495588 CHRDL2Q6WN34 429 aa16.3■□□□□ 0.2
GAPVD1-218ENST00000495588 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
GAPVD1-218ENST00000495588 FOXD4L1Q9NU39 408 aa16.2■□□□□ 0.18
GAPVD1-218ENST00000495588 ZBTB12Q9Y330 459 aaPredicted RBP16.16■□□□□ 0.18
GAPVD1-218ENST00000495588 ATF5Q9Y2D1 282 aaPredicted RBP16.11■□□□□ 0.17
GAPVD1-218ENST00000495588 AKT1S1Q96B36 256 aa16.1■□□□□ 0.17
GAPVD1-218ENST00000495588 OSCARQ8IYS5 282 aa15.94■□□□□ 0.14
GAPVD1-218ENST00000495588 REM2Q8IYK8 340 aaPredicted RBP15.92■□□□□ 0.14
GAPVD1-218ENST00000495588 SP7Q8TDD2 431 aaPredicted RBP15.85■□□□□ 0.13
GAPVD1-218ENST00000495588 PIP4P2Q8N4L2 257 aa15.82■□□□□ 0.12
GAPVD1-218ENST00000495588 ZBTB22O15209 634 aa15.78■□□□□ 0.12
GAPVD1-218ENST00000495588 PITPNM1O00562 1244 aa15.75■□□□□ 0.11
GAPVD1-218ENST00000495588 ATXN8OSP0DMR3 200 aa15.74■□□□□ 0.11
GAPVD1-218ENST00000495588 FXR2P51116 673 aaKnown RBP eCLIP15.67■□□□□ 0.1
GAPVD1-218ENST00000495588 HAX1O00165 279 aa15.66■□□□□ 0.1
GAPVD1-218ENST00000495588 FBLN2P98095 1184 aa15.63■□□□□ 0.09
GAPVD1-218ENST00000495588 SPDYE2BA6NHP3 402 aa15.6■□□□□ 0.09
GAPVD1-218ENST00000495588 SPDYE6P0CI01 402 aa15.6■□□□□ 0.09
GAPVD1-218ENST00000495588 SPDYE2Q495Y8 402 aa15.6■□□□□ 0.09
GAPVD1-218ENST00000495588 SPDYE1Q8NFV5 336 aaPredicted RBP15.42■□□□□ 0.06
GAPVD1-218ENST00000495588 CLEC11AQ9Y240 323 aa15.41■□□□□ 0.06
GAPVD1-218ENST00000495588 PRKAR2AP13861 404 aaKnown RBP15.36■□□□□ 0.05
GAPVD1-218ENST00000495588 MKRN4PQ13434 485 aaPredicted RBP15.36■□□□□ 0.05
GAPVD1-218ENST00000495588 ZNF692Q9BU19 519 aaPredicted RBP15.36■□□□□ 0.05
GAPVD1-218ENST00000495588 EVX2Q03828 476 aa15.35■□□□□ 0.05
GAPVD1-218ENST00000495588 SSUH2Q9Y2M2 353 aa15.31■□□□□ 0.04
GAPVD1-218ENST00000495588 C19orf67A6NJJ6 358 aa15.18■□□□□ 0.02
GAPVD1-218ENST00000495588 PABPN1Q86U42 306 aaKnown RBP eCLIP15.12■□□□□ 0.01
GAPVD1-218ENST00000495588 PRR29P0C7W0 189 aa15.11■□□□□ 0.01
GAPVD1-218ENST00000495588 CHADLQ6NUI6 762 aa15.09■□□□□ 0.01
GAPVD1-218ENST00000495588 GABBR2O75899 941 aa15.04■□□□□ -0
GAPVD1-218ENST00000495588 CD44P16070 742 aaKnown RBP14.87□□□□□ -0.03
GAPVD1-218ENST00000495588 LHX8Q68G74 356 aa14.86□□□□□ -0.03
GAPVD1-218ENST00000495588 FARP1Q9Y4F1 1045 aaPredicted RBP14.86□□□□□ -0.03
GAPVD1-218ENST00000495588 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
GAPVD1-218ENST00000495588 CLCN6P51797 869 aa14.77□□□□□ -0.05
GAPVD1-218ENST00000495588 STAG3Q9UJ98 1225 aa14.68□□□□□ -0.06
GAPVD1-218ENST00000495588 POTEIP0CG38 1075 aa14.67□□□□□ -0.06
GAPVD1-218ENST00000495588 DCBLD2Q96PD2 775 aa14.64□□□□□ -0.07
GAPVD1-218ENST00000495588 ZNF579Q8NAF0 562 aaKnown RBP14.61□□□□□ -0.07
GAPVD1-218ENST00000495588 ZRANB1Q9UGI0 708 aa14.61□□□□□ -0.07
GAPVD1-218ENST00000495588 CREBZFQ9NS37 354 aa14.6□□□□□ -0.07
GAPVD1-218ENST00000495588 SPDYE4A6NLX3 237 aa14.55□□□□□ -0.08
GAPVD1-218ENST00000495588 PAK3O75914 559 aaPredicted RBP14.49□□□□□ -0.09
GAPVD1-218ENST00000495588 EHMT2Q96KQ7 1210 aa14.48□□□□□ -0.09
GAPVD1-218ENST00000495588 GALR2O43603 387 aaPredicted RBP14.43□□□□□ -0.1
GAPVD1-218ENST00000495588 NPM1P06748 294 aaKnown RBP eCLIP14.41□□□□□ -0.1
GAPVD1-218ENST00000495588 PHF12Q96QT6 1004 aa14.35□□□□□ -0.11
GAPVD1-218ENST00000495588 MNX1P50219 401 aaPredicted RBP14.28□□□□□ -0.12
GAPVD1-218ENST00000495588 OTUD5Q96G74 571 aa14.22□□□□□ -0.13
GAPVD1-218ENST00000495588 PLSCR2Q9NRY7 297 aa14.19□□□□□ -0.14
GAPVD1-218ENST00000495588 POTEB2H3BUK9 544 aa14.18□□□□□ -0.14
GAPVD1-218ENST00000495588 PELP1Q8IZL8 1130 aaKnown RBP14.15□□□□□ -0.14
GAPVD1-218ENST00000495588 MS4A3Q96HJ5 214 aa14.15□□□□□ -0.14
GAPVD1-218ENST00000495588 ASTLQ6HA08 431 aaPredicted RBP14.12□□□□□ -0.15
GAPVD1-218ENST00000495588 SLC39A7Q92504 469 aa14.1□□□□□ -0.15
GAPVD1-218ENST00000495588 TSPYL2Q9H2G4 693 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms