RNA–Protein interactions for RNA: ENST00000489377.1

MSANTD3-205, Transcript of Myb/SANT DNA binding domain containing 3, human

TSL 2

Gene MSANTD3, Length 1,991 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSANTD3-205	ENST00000489377	KIAA1210	Q9ULL0	1709 aa		11.5	□□□□□ -0.57
MSANTD3-205	ENST00000489377	LETM1	O95202	739 aa	Predicted RBP	11.5	□□□□□ -0.57
MSANTD3-205	ENST00000489377	EVI5L	Q96CN4	794 aa		11.5	□□□□□ -0.57
MSANTD3-205	ENST00000489377	MRVI1	Q9Y6F6	885 aa		11.5	□□□□□ -0.57
MSANTD3-205	ENST00000489377	PRAG1	Q86YV5	1406 aa		11.49	□□□□□ -0.57
MSANTD3-205	ENST00000489377	KTN1	Q86UP2	1357 aa	Known RBP	11.49	□□□□□ -0.57
MSANTD3-205	ENST00000489377	PIK3R4	Q99570	1358 aa		11.49	□□□□□ -0.57
MSANTD3-205	ENST00000489377	ZNF280D	Q6N043	979 aa		11.49	□□□□□ -0.57
MSANTD3-205	ENST00000489377	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.49	□□□□□ -0.57
MSANTD3-205	ENST00000489377	SLC26A8	Q96RN1	970 aa		11.49	□□□□□ -0.57
MSANTD3-205	ENST00000489377	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.49	□□□□□ -0.57
MSANTD3-205	ENST00000489377	GTPBP4	Q9BZE4	634 aa	Known RBP	11.48	□□□□□ -0.57
MSANTD3-205	ENST00000489377	SETD1A	O15047	1707 aa	Known RBP	11.48	□□□□□ -0.57
MSANTD3-205	ENST00000489377	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
MSANTD3-205	ENST00000489377	CSPP1	Q1MSJ5	1256 aa		11.48	□□□□□ -0.57
MSANTD3-205	ENST00000489377	LONRF3	Q496Y0	759 aa		11.48	□□□□□ -0.57
MSANTD3-205	ENST00000489377	RNF217	Q8TC41	542 aa		11.48	□□□□□ -0.57
MSANTD3-205	ENST00000489377	SENP3	Q9H4L4	574 aa	Predicted RBP	11.48	□□□□□ -0.57
MSANTD3-205	ENST00000489377	C14orf93	Q9H972	538 aa	Known RBP	11.48	□□□□□ -0.57
MSANTD3-205	ENST00000489377	RCAN3	Q9UKA8	241 aa		11.48	□□□□□ -0.57
MSANTD3-205	ENST00000489377	RIOK3	O14730	519 aa	Known RBP	11.47	□□□□□ -0.57
MSANTD3-205	ENST00000489377	GRPEL1	Q9HAV7	217 aa		11.47	□□□□□ -0.57
MSANTD3-205	ENST00000489377	BECN1	Q14457	450 aa		11.47	□□□□□ -0.57
MSANTD3-205	ENST00000489377	FAM13B	Q9NYF5	915 aa		11.47	□□□□□ -0.57
MSANTD3-205	ENST00000489377	KDM2B	Q8NHM5	1336 aa		11.46	□□□□□ -0.57
MSANTD3-205	ENST00000489377	CHD2	O14647	1828 aa	Known RBP	11.46	□□□□□ -0.57
MSANTD3-205	ENST00000489377	PRR29	P0C7W0	189 aa		11.46	□□□□□ -0.58
MSANTD3-205	ENST00000489377	ZSCAN20	P17040	1043 aa	Predicted RBP	11.46	□□□□□ -0.58
MSANTD3-205	ENST00000489377	CXorf38	Q8TB03	319 aa		11.46	□□□□□ -0.58
MSANTD3-205	ENST00000489377	ANTXR1	Q9H6X2	564 aa		11.46	□□□□□ -0.58
MSANTD3-205	ENST00000489377	NWD1	Q149M9	1564 aa		11.46	□□□□□ -0.58
MSANTD3-205	ENST00000489377	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.46	□□□□□ -0.58
MSANTD3-205	ENST00000489377	TRPM1	Q7Z4N2	1603 aa		11.45	□□□□□ -0.58
MSANTD3-205	ENST00000489377	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.45	□□□□□ -0.58
MSANTD3-205	ENST00000489377	CFAP70	Q5T0N1	1121 aa		11.45	□□□□□ -0.58
MSANTD3-205	ENST00000489377	GET4	Q7L5D6	327 aa	Predicted RBP	11.45	□□□□□ -0.58
MSANTD3-205	ENST00000489377	KCNA6	P17658	529 aa		11.45	□□□□□ -0.58
MSANTD3-205	ENST00000489377	NKTR	P30414	1462 aa	Known RBP	11.44	□□□□□ -0.58
MSANTD3-205	ENST00000489377	MET	P08581	1390 aa		11.44	□□□□□ -0.58
MSANTD3-205	ENST00000489377	PPFIA4	O75335	1185 aa		11.44	□□□□□ -0.58
MSANTD3-205	ENST00000489377	CCDC181	Q5TID7	509 aa		11.44	□□□□□ -0.58
MSANTD3-205	ENST00000489377	SKAP1	Q86WV1	359 aa		11.44	□□□□□ -0.58
MSANTD3-205	ENST00000489377	CPS1	P31327	1500 aa		11.44	□□□□□ -0.58
MSANTD3-205	ENST00000489377	RALGAPB	Q86X10	1494 aa		11.43	□□□□□ -0.58
MSANTD3-205	ENST00000489377	RHBDL3	P58872	404 aa		11.43	□□□□□ -0.58
MSANTD3-205	ENST00000489377	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.43	□□□□□ -0.58
MSANTD3-205	ENST00000489377	STK26	Q9P289	416 aa		11.43	□□□□□ -0.58
MSANTD3-205	ENST00000489377	KNDC1	Q76NI1	1749 aa		11.43	□□□□□ -0.58
MSANTD3-205	ENST00000489377	XRN1	Q8IZH2	1706 aa	Known RBP	11.43	□□□□□ -0.58
MSANTD3-205	ENST00000489377	LRPPRC	P42704	1394 aa	Known RBP	11.43	□□□□□ -0.58
MSANTD3-205	ENST00000489377	MCCD1	P59942	119 aa	Predicted RBP	11.43	□□□□□ -0.58
MSANTD3-205	ENST00000489377	ZRSR2	Q15696	482 aa	Known RBP	11.43	□□□□□ -0.58
MSANTD3-205	ENST00000489377	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.43	□□□□□ -0.58
MSANTD3-205	ENST00000489377	ATL2	Q8NHH9	583 aa		11.43	□□□□□ -0.58
MSANTD3-205	ENST00000489377	CCDC94	Q9BW85	323 aa	Predicted RBP	11.43	□□□□□ -0.58
MSANTD3-205	ENST00000489377	UBA5	Q9GZZ9	404 aa		11.43	□□□□□ -0.58
MSANTD3-205	ENST00000489377	ASXL1	Q8IXJ9	1541 aa		11.43	□□□□□ -0.58
MSANTD3-205	ENST00000489377	ROCK2	O75116	1388 aa	Known RBP	11.42	□□□□□ -0.58
MSANTD3-205	ENST00000489377	DYNC1I1	O14576	645 aa		11.42	□□□□□ -0.58
MSANTD3-205	ENST00000489377	EPB41L2	O43491	1005 aa	Known RBP	11.42	□□□□□ -0.58
MSANTD3-205	ENST00000489377	MCM4	P33991	863 aa		11.42	□□□□□ -0.58
MSANTD3-205	ENST00000489377	WDR78	Q5VTH9	848 aa		11.42	□□□□□ -0.58
MSANTD3-205	ENST00000489377	ZSCAN30	Q86W11	494 aa		11.42	□□□□□ -0.58
MSANTD3-205	ENST00000489377	ITFG2	Q969R8	447 aa		11.42	□□□□□ -0.58
MSANTD3-205	ENST00000489377	BORCS6	Q96GS4	357 aa		11.42	□□□□□ -0.58
MSANTD3-205	ENST00000489377	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.42	□□□□□ -0.58
MSANTD3-205	ENST00000489377	ADGRB1	O14514	1584 aa		11.42	□□□□□ -0.58
MSANTD3-205	ENST00000489377	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.42	□□□□□ -0.58
MSANTD3-205	ENST00000489377	PTPRU	Q92729	1446 aa		11.41	□□□□□ -0.58
MSANTD3-205	ENST00000489377	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
MSANTD3-205	ENST00000489377	NBPF8	Q3BBV2	869 aa		11.41	□□□□□ -0.58
MSANTD3-205	ENST00000489377	AMOTL2	Q9Y2J4	779 aa		11.41	□□□□□ -0.58
MSANTD3-205	ENST00000489377	FRMD4B	Q9Y2L6	1034 aa		11.41	□□□□□ -0.58
MSANTD3-205	ENST00000489377	CEP83	Q9Y592	693 aa		11.41	□□□□□ -0.58
MSANTD3-205	ENST00000489377	STRCP1	A6NGW2	1772 aa		11.41	□□□□□ -0.58
MSANTD3-205	ENST00000489377	TMEM132E	Q6IEE7	984 aa		11.41	□□□□□ -0.58
MSANTD3-205	ENST00000489377	HELB	Q8NG08	1087 aa	Predicted RBP	11.41	□□□□□ -0.58
MSANTD3-205	ENST00000489377	PNISR	Q8TF01	805 aa	Known RBP	11.41	□□□□□ -0.58
MSANTD3-205	ENST00000489377	FBXW7	Q969H0	707 aa		11.41	□□□□□ -0.58
MSANTD3-205	ENST00000489377	ABCC11	Q96J66	1382 aa		11.4	□□□□□ -0.58
MSANTD3-205	ENST00000489377	TECPR2	O15040	1411 aa		11.4	□□□□□ -0.58
MSANTD3-205	ENST00000489377	PTCH1	Q13635	1447 aa		11.4	□□□□□ -0.58
MSANTD3-205	ENST00000489377	ANKRD62	A6NC57	917 aa		11.4	□□□□□ -0.58
MSANTD3-205	ENST00000489377	LIG1	P18858	919 aa		11.4	□□□□□ -0.58
MSANTD3-205	ENST00000489377	PDE3B	Q13370	1112 aa		11.4	□□□□□ -0.58
MSANTD3-205	ENST00000489377	ZKSCAN2	Q63HK3	967 aa		11.4	□□□□□ -0.58
MSANTD3-205	ENST00000489377	CACTIN-AS1	Q8N1I8	211 aa		11.4	□□□□□ -0.58
MSANTD3-205	ENST00000489377	DLC1	Q96QB1	1528 aa		11.4	□□□□□ -0.58
MSANTD3-205	ENST00000489377	VIRMA	Q69YN4	1812 aa	Known RBP	11.4	□□□□□ -0.58
MSANTD3-205	ENST00000489377	EXOC5	O00471	708 aa		11.39	□□□□□ -0.59
MSANTD3-205	ENST00000489377	TRAK2	O60296	914 aa		11.39	□□□□□ -0.59
MSANTD3-205	ENST00000489377	CREBRF	Q8IUR6	639 aa		11.39	□□□□□ -0.59
MSANTD3-205	ENST00000489377	MICAL1	Q8TDZ2	1067 aa		11.39	□□□□□ -0.59
MSANTD3-205	ENST00000489377	SLK	Q9H2G2	1235 aa	Predicted RBP	11.39	□□□□□ -0.59
MSANTD3-205	ENST00000489377	USP19	O94966	1318 aa		11.39	□□□□□ -0.59
MSANTD3-205	ENST00000489377	GPRASP1	Q5JY77	1395 aa		11.39	□□□□□ -0.59
MSANTD3-205	ENST00000489377	LTBP4	Q8N2S1	1624 aa		11.39	□□□□□ -0.59
MSANTD3-205	ENST00000489377	IPO8	O15397	1037 aa	Known RBP	11.39	□□□□□ -0.59
MSANTD3-205	ENST00000489377	CCDC97	Q96F63	343 aa	Predicted RBP	11.39	□□□□□ -0.59
MSANTD3-205	ENST00000489377	TSPYL1	Q9H0U9	437 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms