RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 PTK2Q05397 1052 aa6.46□□□□□ -1.37
PRPF38B-205ENST00000485810 GPSM3Q9Y4H4 160 aa6.46□□□□□ -1.37
PRPF38B-205ENST00000485810 NPM2Q86SE8 214 aaKnown RBP6.45□□□□□ -1.38
PRPF38B-205ENST00000485810 IL27Q8NEV9 243 aa6.45□□□□□ -1.38
PRPF38B-205ENST00000485810 CELA2BP08218 269 aaPredicted RBP6.44□□□□□ -1.38
PRPF38B-205ENST00000485810 RAB15P59190 212 aa6.44□□□□□ -1.38
PRPF38B-205ENST00000485810 SH3D19Q5HYK7 790 aa6.44□□□□□ -1.38
PRPF38B-205ENST00000485810 DDRGK1Q96HY6 314 aa6.44□□□□□ -1.38
PRPF38B-205ENST00000485810 DNMT3AQ9Y6K1 912 aaPredicted RBP6.44□□□□□ -1.38
PRPF38B-205ENST00000485810 AP1G2O75843 785 aa6.44□□□□□ -1.38
PRPF38B-205ENST00000485810 ITGB2P05107 769 aa6.44□□□□□ -1.38
PRPF38B-205ENST00000485810 FOXK2Q01167 660 aa6.44□□□□□ -1.38
PRPF38B-205ENST00000485810 SRSF11Q05519 484 aaKnown RBP6.44□□□□□ -1.38
PRPF38B-205ENST00000485810 GPAT2Q6NUI2 795 aa6.44□□□□□ -1.38
PRPF38B-205ENST00000485810 C14orf37Q86TY3 774 aa6.44□□□□□ -1.38
PRPF38B-205ENST00000485810 RHOQP17081 205 aa6.43□□□□□ -1.38
PRPF38B-205ENST00000485810 RNF144AP50876 292 aaPredicted RBP6.42□□□□□ -1.38
PRPF38B-205ENST00000485810 BRPF1P55201 1214 aaPredicted RBP6.42□□□□□ -1.38
PRPF38B-205ENST00000485810 TMEM132AQ24JP5 1023 aa6.42□□□□□ -1.38
PRPF38B-205ENST00000485810 LYSMD3Q7Z3D4 306 aa6.42□□□□□ -1.38
PRPF38B-205ENST00000485810 TRIM34Q9BYJ4 488 aa6.42□□□□□ -1.38
PRPF38B-205ENST00000485810 DCAF1Q9Y4B6 1507 aa6.41□□□□□ -1.38
PRPF38B-205ENST00000485810 USP17L8P0C7I0 530 aa6.41□□□□□ -1.38
PRPF38B-205ENST00000485810 MARSP56192 900 aaKnown RBP6.41□□□□□ -1.38
PRPF38B-205ENST00000485810 DBN1Q16643 649 aa6.41□□□□□ -1.38
PRPF38B-205ENST00000485810 KANK3Q6NY19 840 aa6.41□□□□□ -1.38
PRPF38B-205ENST00000485810 PRICKLE2Q7Z3G6 844 aa6.41□□□□□ -1.38
PRPF38B-205ENST00000485810 ZNF837Q96EG3 531 aaPredicted RBP6.41□□□□□ -1.38
PRPF38B-205ENST00000485810 NBPF20Q3BBV1 942 aa6.4□□□□□ -1.39
PRPF38B-205ENST00000485810 DZIP3Q86Y13 1208 aaKnown RBP6.4□□□□□ -1.39
PRPF38B-205ENST00000485810 CYLDQ9NQC7 956 aa6.4□□□□□ -1.39
PRPF38B-205ENST00000485810 GPR25O00155 361 aa6.39□□□□□ -1.39
PRPF38B-205ENST00000485810 TRIM22Q8IYM9 498 aa6.39□□□□□ -1.39
PRPF38B-205ENST00000485810 SCARF2Q96GP6 870 aaPredicted RBP6.39□□□□□ -1.39
PRPF38B-205ENST00000485810 CNTNAP5Q8WYK1 1306 aa6.39□□□□□ -1.39
PRPF38B-205ENST00000485810 GIGYF1O75420 1035 aaPredicted RBP6.38□□□□□ -1.39
PRPF38B-205ENST00000485810 IGF1RP08069 1367 aa6.37□□□□□ -1.39
PRPF38B-205ENST00000485810 ACDQ96AP0 544 aa6.37□□□□□ -1.39
PRPF38B-205ENST00000485810 MBIPQ9NS73 344 aa6.37□□□□□ -1.39
PRPF38B-205ENST00000485810 THBS1P07996 1170 aa6.36□□□□□ -1.39
PRPF38B-205ENST00000485810 RFC5P40937 340 aa6.36□□□□□ -1.39
PRPF38B-205ENST00000485810 PLA2G4EQ3MJ16 856 aa6.36□□□□□ -1.39
PRPF38B-205ENST00000485810 SEPT12Q8IYM1 358 aa6.36□□□□□ -1.39
PRPF38B-205ENST00000485810 DCAF5Q96JK2 942 aa6.36□□□□□ -1.39
PRPF38B-205ENST00000485810 A0A1W2PRU2 124 aa6.35□□□□□ -1.39
PRPF38B-205ENST00000485810 ATP5J2-PTCD1G3V325 749 aa6.35□□□□□ -1.39
PRPF38B-205ENST00000485810 POU4F2Q12837 409 aa6.35□□□□□ -1.39
PRPF38B-205ENST00000485810 PCMTD1Q96MG8 357 aaPredicted RBP6.35□□□□□ -1.39
PRPF38B-205ENST00000485810 GRIP2Q9C0E4 1043 aa6.35□□□□□ -1.39
PRPF38B-205ENST00000485810 BCRP11274 1271 aa6.34□□□□□ -1.39
PRPF38B-205ENST00000485810 GPC1P35052 558 aa6.34□□□□□ -1.39
PRPF38B-205ENST00000485810 MAP3K10Q02779 954 aa6.34□□□□□ -1.39
PRPF38B-205ENST00000485810 GTPBP3Q969Y2 492 aaKnown RBP6.34□□□□□ -1.39
PRPF38B-205ENST00000485810 GMCL1Q96IK5 515 aa6.34□□□□□ -1.39
PRPF38B-205ENST00000485810 GJD4Q96KN9 370 aaPredicted RBP6.34□□□□□ -1.39
PRPF38B-205ENST00000485810 DYRK1BQ9Y463 629 aa6.34□□□□□ -1.39
PRPF38B-205ENST00000485810 MEN1O00255 615 aa6.33□□□□□ -1.4
PRPF38B-205ENST00000485810 PROCP04070 461 aa6.33□□□□□ -1.4
PRPF38B-205ENST00000485810 FBXO45P0C2W1 286 aa6.33□□□□□ -1.4
PRPF38B-205ENST00000485810 ERVK-9P63128 1117 aa6.33□□□□□ -1.4
PRPF38B-205ENST00000485810 SPOCK3Q9BQ16 436 aa6.33□□□□□ -1.4
PRPF38B-205ENST00000485810 ENAMQ9NRM1 1142 aa6.33□□□□□ -1.4
PRPF38B-205ENST00000485810 SHROOM4Q9ULL8 1493 aa6.32□□□□□ -1.4
PRPF38B-205ENST00000485810 SCTRP47872 440 aa6.32□□□□□ -1.4
PRPF38B-205ENST00000485810 NBPF10Q6P3W6 841 aaKnown RBP6.32□□□□□ -1.4
PRPF38B-205ENST00000485810 RIPOR1Q6ZS17 1223 aa6.32□□□□□ -1.4
PRPF38B-205ENST00000485810 NBPF15Q8N660 670 aa6.32□□□□□ -1.4
PRPF38B-205ENST00000485810 ZBBXA8MT70 800 aa6.31□□□□□ -1.4
PRPF38B-205ENST00000485810 SPATA31C2B4DYI2 1134 aa6.31□□□□□ -1.4
PRPF38B-205ENST00000485810 GPR37L1O60883 481 aa6.31□□□□□ -1.4
PRPF38B-205ENST00000485810 ADAM23O75077 832 aa6.31□□□□□ -1.4
PRPF38B-205ENST00000485810 XP32Q5T750 250 aa6.31□□□□□ -1.4
PRPF38B-205ENST00000485810 PCDHB9Q9Y5E1 797 aa6.31□□□□□ -1.4
PRPF38B-205ENST00000485810 MSTNO14793 375 aa6.31□□□□□ -1.4
PRPF38B-205ENST00000485810 TRAK2O60296 914 aa6.31□□□□□ -1.4
PRPF38B-205ENST00000485810 CC2D2BQ6DHV5 1058 aa6.31□□□□□ -1.4
PRPF38B-205ENST00000485810 PNMA1Q8ND90 353 aa6.31□□□□□ -1.4
PRPF38B-205ENST00000485810 GAS2L1Q99501 681 aaPredicted RBP6.31□□□□□ -1.4
PRPF38B-205ENST00000485810 OSBPL3Q9H4L5 887 aa6.31□□□□□ -1.4
PRPF38B-205ENST00000485810 GOPCQ9HD26 462 aa6.31□□□□□ -1.4
PRPF38B-205ENST00000485810 SNRPNP63162 240 aaKnown RBP6.3□□□□□ -1.4
PRPF38B-205ENST00000485810 CLN3Q13286 438 aa6.3□□□□□ -1.4
PRPF38B-205ENST00000485810 UBAP2LQ14157 1087 aaKnown RBP6.3□□□□□ -1.4
PRPF38B-205ENST00000485810 C1orf229Q6ZS94 237 aaPredicted RBP6.3□□□□□ -1.4
PRPF38B-205ENST00000485810 BEND7Q8N7W2 519 aaPredicted RBP6.3□□□□□ -1.4
PRPF38B-205ENST00000485810 PHF20L1A8MW92 1017 aa6.29□□□□□ -1.4
PRPF38B-205ENST00000485810 OIP5O43482 229 aa6.29□□□□□ -1.4
PRPF38B-205ENST00000485810 SHISA8B8ZZ34 492 aa6.28□□□□□ -1.4
PRPF38B-205ENST00000485810 FOXR1Q6PIV2 292 aa6.28□□□□□ -1.4
PRPF38B-205ENST00000485810 NEDD1Q8NHV4 660 aa6.28□□□□□ -1.4
PRPF38B-205ENST00000485810 LRRC4BQ9NT99 713 aa6.28□□□□□ -1.4
PRPF38B-205ENST00000485810 HRH3Q9Y5N1 445 aa6.28□□□□□ -1.4
PRPF38B-205ENST00000485810 KRBA1A5PL33 1030 aa6.27□□□□□ -1.41
PRPF38B-205ENST00000485810 H7C1W4 665 aa6.27□□□□□ -1.41
PRPF38B-205ENST00000485810 IL2RAP01589 272 aa6.27□□□□□ -1.41
PRPF38B-205ENST00000485810 F11P03951 625 aa6.27□□□□□ -1.41
PRPF38B-205ENST00000485810 HOXB4P17483 251 aaPredicted RBP6.27□□□□□ -1.41
PRPF38B-205ENST00000485810 MX2P20592 715 aa6.27□□□□□ -1.41
PRPF38B-205ENST00000485810 TMEM259Q4ZIN3 620 aa6.27□□□□□ -1.41
PRPF38B-205ENST00000485810 WDR44Q5JSH3 913 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms