RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 ZNF784Q8NCA9 323 aaPredicted RBP9.52□□□□□ -0.89
NCKAP1-204ENST00000477988 FKBPLQ9UIM3 349 aa9.52□□□□□ -0.89
NCKAP1-204ENST00000477988 DBN1Q16643 649 aa9.51□□□□□ -0.89
NCKAP1-204ENST00000477988 KRBA1A5PL33 1030 aa9.5□□□□□ -0.89
NCKAP1-204ENST00000477988 RNF144AP50876 292 aaPredicted RBP9.5□□□□□ -0.89
NCKAP1-204ENST00000477988 FOXR1Q6PIV2 292 aa9.49□□□□□ -0.89
NCKAP1-204ENST00000477988 ZC3H4Q9UPT8 1303 aaKnown RBP9.49□□□□□ -0.89
NCKAP1-204ENST00000477988 RHOQP17081 205 aa9.48□□□□□ -0.89
NCKAP1-204ENST00000477988 CTDSPL2Q05D32 466 aa9.48□□□□□ -0.89
NCKAP1-204ENST00000477988 PRICKLE2Q7Z3G6 844 aa9.48□□□□□ -0.89
NCKAP1-204ENST00000477988 OIP5O43482 229 aa9.47□□□□□ -0.89
NCKAP1-204ENST00000477988 ERVH48-1M5A8F1 160 aa9.46□□□□□ -0.9
NCKAP1-204ENST00000477988 NBPF20Q3BBV1 942 aa9.46□□□□□ -0.9
NCKAP1-204ENST00000477988 GPSM3Q9Y4H4 160 aa9.46□□□□□ -0.9
NCKAP1-204ENST00000477988 FURINP09958 794 aa9.45□□□□□ -0.9
NCKAP1-204ENST00000477988 SNRPNP63162 240 aaKnown RBP9.45□□□□□ -0.9
NCKAP1-204ENST00000477988 PTK2Q05397 1052 aa9.45□□□□□ -0.9
NCKAP1-204ENST00000477988 ALYREFQ86V81 257 aaKnown RBP9.45□□□□□ -0.9
NCKAP1-204ENST00000477988 ADAM32Q8TC27 787 aa9.45□□□□□ -0.9
NCKAP1-204ENST00000477988 GTPBP3Q969Y2 492 aaKnown RBP9.44□□□□□ -0.9
NCKAP1-204ENST00000477988 DYRK1BQ9Y463 629 aa9.44□□□□□ -0.9
NCKAP1-204ENST00000477988 H7C1W4 665 aa9.43□□□□□ -0.9
NCKAP1-204ENST00000477988 CLK2P49760 499 aaKnown RBP9.43□□□□□ -0.9
NCKAP1-204ENST00000477988 RIPOR1Q6ZS17 1223 aa9.43□□□□□ -0.9
NCKAP1-204ENST00000477988 LRRN4Q8WUT4 740 aa9.43□□□□□ -0.9
NCKAP1-204ENST00000477988 ESPNB1AK53 854 aa9.42□□□□□ -0.9
NCKAP1-204ENST00000477988 MX2P20592 715 aa9.42□□□□□ -0.9
NCKAP1-204ENST00000477988 COL8A1P27658 744 aa9.42□□□□□ -0.9
NCKAP1-204ENST00000477988 PDE4DQ08499 809 aa9.42□□□□□ -0.9
NCKAP1-204ENST00000477988 TRERF1Q96PN7 1200 aa9.42□□□□□ -0.9
NCKAP1-204ENST00000477988 GPC1P35052 558 aa9.41□□□□□ -0.9
NCKAP1-204ENST00000477988 NR6A1Q15406 480 aa9.41□□□□□ -0.9
NCKAP1-204ENST00000477988 NSFL1CQ9UNZ2 370 aaKnown RBP9.41□□□□□ -0.9
NCKAP1-204ENST00000477988 RAB15P59190 212 aa9.4□□□□□ -0.9
NCKAP1-204ENST00000477988 RSPH6AQ9H0K4 717 aa9.4□□□□□ -0.9
NCKAP1-204ENST00000477988 MKL2Q9ULH7 1088 aa9.4□□□□□ -0.9
NCKAP1-204ENST00000477988 SHISA8B8ZZ34 492 aa9.39□□□□□ -0.91
NCKAP1-204ENST00000477988 OXCT2Q9BYC2 517 aaPredicted RBP9.39□□□□□ -0.91
NCKAP1-204ENST00000477988 PPP2R2DQ66LE6 453 aa9.38□□□□□ -0.91
NCKAP1-204ENST00000477988 KRTAP1-3Q8IUG1 177 aa9.38□□□□□ -0.91
NCKAP1-204ENST00000477988 MAP2K3P46734 347 aa9.37□□□□□ -0.91
NCKAP1-204ENST00000477988 C1orf229Q6ZS94 237 aaPredicted RBP9.36□□□□□ -0.91
NCKAP1-204ENST00000477988 SEPT12Q8IYM1 358 aa9.36□□□□□ -0.91
NCKAP1-204ENST00000477988 GAS2L1Q99501 681 aaPredicted RBP9.36□□□□□ -0.91
NCKAP1-204ENST00000477988 CYLDQ9NQC7 956 aa9.36□□□□□ -0.91
NCKAP1-204ENST00000477988 ATP5J2-PTCD1G3V325 749 aa9.35□□□□□ -0.91
NCKAP1-204ENST00000477988 ITGB7P26010 798 aa9.35□□□□□ -0.91
NCKAP1-204ENST00000477988 POU4F2Q12837 409 aa9.35□□□□□ -0.91
NCKAP1-204ENST00000477988 DZIP3Q86Y13 1208 aaKnown RBP9.35□□□□□ -0.91
NCKAP1-204ENST00000477988 HOXB4P17483 251 aaPredicted RBP9.34□□□□□ -0.91
NCKAP1-204ENST00000477988 CFHR5Q9BXR6 569 aa9.34□□□□□ -0.91
NCKAP1-204ENST00000477988 POLR3EQ9NVU0 708 aa9.34□□□□□ -0.91
NCKAP1-204ENST00000477988 WDR44Q5JSH3 913 aa9.33□□□□□ -0.92
NCKAP1-204ENST00000477988 LINC00114Q6XXX2 140 aa9.33□□□□□ -0.92
NCKAP1-204ENST00000477988 GRIP2Q9C0E4 1043 aa9.33□□□□□ -0.92
NCKAP1-204ENST00000477988 NUCKS1Q9H1E3 243 aaKnown RBP9.33□□□□□ -0.92
NCKAP1-204ENST00000477988 A0A1W2PRU2 124 aa9.32□□□□□ -0.92
NCKAP1-204ENST00000477988 SPATA31C2B4DYI2 1134 aa9.32□□□□□ -0.92
NCKAP1-204ENST00000477988 MEN1O00255 615 aa9.32□□□□□ -0.92
NCKAP1-204ENST00000477988 THBS1P07996 1170 aa9.32□□□□□ -0.92
NCKAP1-204ENST00000477988 FBXO31Q5XUX0 539 aaPredicted RBP9.32□□□□□ -0.92
NCKAP1-204ENST00000477988 NBPF10Q6P3W6 841 aaKnown RBP9.32□□□□□ -0.92
NCKAP1-204ENST00000477988 NBPF15Q8N660 670 aa9.32□□□□□ -0.92
NCKAP1-204ENST00000477988 TRIM52Q96A61 297 aa9.32□□□□□ -0.92
NCKAP1-204ENST00000477988 KLRG1Q96E93 195 aa9.32□□□□□ -0.92
NCKAP1-204ENST00000477988 C1QTNF9BB2RNN3 333 aa9.31□□□□□ -0.92
NCKAP1-204ENST00000477988 SUV39H2Q9H5I1 410 aa9.31□□□□□ -0.92
NCKAP1-204ENST00000477988 F11P03951 625 aa9.3□□□□□ -0.92
NCKAP1-204ENST00000477988 EPS8L1Q8TE68 723 aa9.3□□□□□ -0.92
NCKAP1-204ENST00000477988 EDARADDQ8WWZ3 215 aa9.3□□□□□ -0.92
NCKAP1-204ENST00000477988 GDF2Q9UK05 429 aaPredicted RBP9.3□□□□□ -0.92
NCKAP1-204ENST00000477988 GRIN2CQ14957 1233 aa9.29□□□□□ -0.92
NCKAP1-204ENST00000477988 SLC27A3Q5K4L6 730 aa9.29□□□□□ -0.92
NCKAP1-204ENST00000477988 CD163Q86VB7 1156 aa9.29□□□□□ -0.92
NCKAP1-204ENST00000477988 RRAGCQ9HB90 399 aa9.29□□□□□ -0.92
NCKAP1-204ENST00000477988 SLC24A3Q9HC58 644 aa9.29□□□□□ -0.92
NCKAP1-204ENST00000477988 TIMMDC1Q9NPL8 285 aa9.28□□□□□ -0.92
NCKAP1-204ENST00000477988 KRTAP4-12Q9BQ66 201 aa9.27□□□□□ -0.93
NCKAP1-204ENST00000477988 ERVK-9P63128 1117 aa9.26□□□□□ -0.93
NCKAP1-204ENST00000477988 CLN3Q13286 438 aa9.26□□□□□ -0.93
NCKAP1-204ENST00000477988 UBAP2LQ14157 1087 aaKnown RBP9.26□□□□□ -0.93
NCKAP1-204ENST00000477988 SKIV2LQ15477 1246 aaKnown RBP9.26□□□□□ -0.93
NCKAP1-204ENST00000477988 GOLGA6L1Q8N7Z2 621 aa9.26□□□□□ -0.93
NCKAP1-204ENST00000477988 NLRP3Q96P20 1036 aa9.26□□□□□ -0.93
NCKAP1-204ENST00000477988 TAS1R3Q7RTX0 852 aa9.25□□□□□ -0.93
NCKAP1-204ENST00000477988 PNMA1Q8ND90 353 aa9.25□□□□□ -0.93
NCKAP1-204ENST00000477988 WASLO00401 505 aaPredicted RBP9.24□□□□□ -0.93
NCKAP1-204ENST00000477988 GNB5O14775 395 aa9.24□□□□□ -0.93
NCKAP1-204ENST00000477988 CHRNA4P43681 627 aa9.24□□□□□ -0.93
NCKAP1-204ENST00000477988 LCE3BQ5TA77 95 aa9.24□□□□□ -0.93
NCKAP1-204ENST00000477988 PHF24Q9UPV7 400 aa9.24□□□□□ -0.93
NCKAP1-204ENST00000477988 PIK3R2O00459 728 aa9.23□□□□□ -0.93
NCKAP1-204ENST00000477988 GIGYF1O75420 1035 aaPredicted RBP9.23□□□□□ -0.93
NCKAP1-204ENST00000477988 CC2D2BQ6DHV5 1058 aa9.23□□□□□ -0.93
NCKAP1-204ENST00000477988 CCDC125Q86Z20 511 aa9.23□□□□□ -0.93
NCKAP1-204ENST00000477988 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.23□□□□□ -0.93
NCKAP1-204ENST00000477988 SEMA6BQ9H3T3 888 aa9.23□□□□□ -0.93
NCKAP1-204ENST00000477988 HMX1Q9NP08 348 aaPredicted RBP9.23□□□□□ -0.93
NCKAP1-204ENST00000477988 SH3D19Q5HYK7 790 aa9.22□□□□□ -0.93
NCKAP1-204ENST00000477988 ZMYM1Q5SVZ6 1142 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms