RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 PRPF38BQ5VTL8 546 aaKnown RBP4.57□□□□□ -1.68
CALD1-216ENST00000473714 TRIM22Q8IYM9 498 aa4.57□□□□□ -1.68
CALD1-216ENST00000473714 ZBTB3Q9H5J0 574 aa4.57□□□□□ -1.68
CALD1-216ENST00000473714 OIP5O43482 229 aa4.56□□□□□ -1.68
CALD1-216ENST00000473714 HRCP23327 699 aa4.56□□□□□ -1.68
CALD1-216ENST00000473714 DIXDC1Q155Q3 683 aa4.56□□□□□ -1.68
CALD1-216ENST00000473714 ZMYM1Q5SVZ6 1142 aa4.56□□□□□ -1.68
CALD1-216ENST00000473714 RIPOR1Q6ZS17 1223 aa4.56□□□□□ -1.68
CALD1-216ENST00000473714 SH3BP5LQ7L8J4 393 aa4.56□□□□□ -1.68
CALD1-216ENST00000473714 LYSMD3Q7Z3D4 306 aa4.56□□□□□ -1.68
CALD1-216ENST00000473714 TSC1Q92574 1164 aa4.56□□□□□ -1.68
CALD1-216ENST00000473714 ZNF837Q96EG3 531 aaPredicted RBP4.56□□□□□ -1.68
CALD1-216ENST00000473714 TRERF1Q96PN7 1200 aa4.56□□□□□ -1.68
CALD1-216ENST00000473714 KCTD15Q96SI1 283 aaPredicted RBP4.56□□□□□ -1.68
CALD1-216ENST00000473714 TULP1O00294 542 aaPredicted RBP4.55□□□□□ -1.68
CALD1-216ENST00000473714 PER1O15534 1290 aaPredicted RBP4.55□□□□□ -1.68
CALD1-216ENST00000473714 MX2P20592 715 aa4.55□□□□□ -1.68
CALD1-216ENST00000473714 SNRPNP63162 240 aaKnown RBP4.55□□□□□ -1.68
CALD1-216ENST00000473714 ERFEQ4G0M1 354 aa4.55□□□□□ -1.68
CALD1-216ENST00000473714 RSBN1LQ6PCB5 846 aaPredicted RBP4.55□□□□□ -1.68
CALD1-216ENST00000473714 KRTAP4-12Q9BQ66 201 aa4.55□□□□□ -1.68
CALD1-216ENST00000473714 SEMA6BQ9H3T3 888 aa4.55□□□□□ -1.68
CALD1-216ENST00000473714 RRAGCQ9HB90 399 aa4.55□□□□□ -1.68
CALD1-216ENST00000473714 CDV3Q9UKY7 258 aaKnown RBP4.55□□□□□ -1.68
CALD1-216ENST00000473714 PCDHB15Q9Y5E8 787 aa4.55□□□□□ -1.68
CALD1-216ENST00000473714 H7C1W4 665 aa4.54□□□□□ -1.68
CALD1-216ENST00000473714 COL8A1P27658 744 aa4.54□□□□□ -1.68
CALD1-216ENST00000473714 PRICKLE2Q7Z3G6 844 aa4.54□□□□□ -1.68
CALD1-216ENST00000473714 GPKOWQ92917 476 aaPredicted RBP eCLIP4.54□□□□□ -1.68
CALD1-216ENST00000473714 GTPBP3Q969Y2 492 aaKnown RBP4.54□□□□□ -1.68
CALD1-216ENST00000473714 CHD1O14646 1710 aa4.54□□□□□ -1.68
CALD1-216ENST00000473714 ADGRL1O94910 1474 aa4.54□□□□□ -1.68
CALD1-216ENST00000473714 KIF13AQ9H1H9 1805 aa4.53□□□□□ -1.68
CALD1-216ENST00000473714 SCO2A0A1W2PP80 73 aa4.53□□□□□ -1.68
CALD1-216ENST00000473714 GRIN2CQ14957 1233 aa4.53□□□□□ -1.68
CALD1-216ENST00000473714 DBN1Q16643 649 aa4.53□□□□□ -1.68
CALD1-216ENST00000473714 FOXD4L5Q5VV16 416 aaPredicted RBP4.53□□□□□ -1.68
CALD1-216ENST00000473714 SLC10A4Q96EP9 437 aa4.53□□□□□ -1.68
CALD1-216ENST00000473714 BEGAINQ9BUH8 593 aa4.53□□□□□ -1.68
CALD1-216ENST00000473714 C1QTNF9BB2RNN3 333 aa4.52□□□□□ -1.69
CALD1-216ENST00000473714 PIK3R2O00459 728 aa4.52□□□□□ -1.69
CALD1-216ENST00000473714 RHOQP17081 205 aa4.52□□□□□ -1.69
CALD1-216ENST00000473714 PTGIRP43119 386 aa4.52□□□□□ -1.69
CALD1-216ENST00000473714 TTLL12Q14166 644 aaPredicted RBP4.52□□□□□ -1.69
CALD1-216ENST00000473714 OXCT2Q9BYC2 517 aaPredicted RBP4.52□□□□□ -1.69
CALD1-216ENST00000473714 TBC1D2Q9BYX2 928 aa4.52□□□□□ -1.69
CALD1-216ENST00000473714 CADPSQ9ULU8 1353 aa4.52□□□□□ -1.69
CALD1-216ENST00000473714 NUTM2BA6NNL0 878 aaPredicted RBP4.51□□□□□ -1.69
CALD1-216ENST00000473714 NUTM2EB1AL46 878 aaPredicted RBP4.51□□□□□ -1.69
CALD1-216ENST00000473714 ADH1AP07327 375 aa4.51□□□□□ -1.69
CALD1-216ENST00000473714 MAP2K3P46734 347 aa4.51□□□□□ -1.69
CALD1-216ENST00000473714 INTS6LQ5JSJ4 861 aaKnown RBP4.51□□□□□ -1.69
CALD1-216ENST00000473714 NUTM2DQ5VT03 806 aaPredicted RBP4.51□□□□□ -1.69
CALD1-216ENST00000473714 ZBTB33Q86T24 672 aa4.51□□□□□ -1.69
CALD1-216ENST00000473714 NUTM2AQ8IVF1 878 aaPredicted RBP4.51□□□□□ -1.69
CALD1-216ENST00000473714 CABLES1Q8TDN4 633 aa4.51□□□□□ -1.69
CALD1-216ENST00000473714 GAS2L1Q99501 681 aaPredicted RBP4.51□□□□□ -1.69
CALD1-216ENST00000473714 ARHGAP9Q9BRR9 750 aa4.51□□□□□ -1.69
CALD1-216ENST00000473714 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
CALD1-216ENST00000473714 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
CALD1-216ENST00000473714 DCAF1Q9Y4B6 1507 aa4.51□□□□□ -1.69
CALD1-216ENST00000473714 ITGB7P26010 798 aa4.5□□□□□ -1.69
CALD1-216ENST00000473714 DOC2BQ14184 412 aa4.5□□□□□ -1.69
CALD1-216ENST00000473714 CSPP1Q1MSJ5 1256 aa4.5□□□□□ -1.69
CALD1-216ENST00000473714 RIC3Q7Z5B4 369 aa4.5□□□□□ -1.69
CALD1-216ENST00000473714 CD163Q86VB7 1156 aa4.5□□□□□ -1.69
CALD1-216ENST00000473714 DYRK1BQ9Y463 629 aa4.5□□□□□ -1.69
CALD1-216ENST00000473714 KDM6BO15054 1643 aa4.5□□□□□ -1.69
CALD1-216ENST00000473714 SMARCA4P51532 1647 aa4.5□□□□□ -1.69
CALD1-216ENST00000473714 CEP164Q9UPV0 1460 aa4.49□□□□□ -1.69
CALD1-216ENST00000473714 SHISA8B8ZZ34 492 aa4.49□□□□□ -1.69
CALD1-216ENST00000473714 RNF144AP50876 292 aaPredicted RBP4.49□□□□□ -1.69
CALD1-216ENST00000473714 PDXDC2PQ6P474 469 aa4.49□□□□□ -1.69
CALD1-216ENST00000473714 NBPF11Q86T75 865 aa4.49□□□□□ -1.69
CALD1-216ENST00000473714 HELBQ8NG08 1087 aaPredicted RBP4.49□□□□□ -1.69
CALD1-216ENST00000473714 EDARADDQ8WWZ3 215 aa4.49□□□□□ -1.69
CALD1-216ENST00000473714 TMPRSS4Q9NRS4 437 aa4.49□□□□□ -1.69
CALD1-216ENST00000473714 ZNF608Q9ULD9 1512 aaPredicted RBP4.48□□□□□ -1.69
CALD1-216ENST00000473714 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
CALD1-216ENST00000473714 AMPD1P23109 780 aa4.48□□□□□ -1.69
CALD1-216ENST00000473714 GIGYF2Q6Y7W6 1299 aaKnown RBP4.48□□□□□ -1.69
CALD1-216ENST00000473714 ZNF784Q8NCA9 323 aaPredicted RBP4.48□□□□□ -1.69
CALD1-216ENST00000473714 SUV39H2Q9H5I1 410 aa4.48□□□□□ -1.69
CALD1-216ENST00000473714 GDF2Q9UK05 429 aaPredicted RBP4.48□□□□□ -1.69
CALD1-216ENST00000473714 GNB5O14775 395 aa4.47□□□□□ -1.69
CALD1-216ENST00000473714 ADD1P35611 737 aaKnown RBP4.47□□□□□ -1.69
CALD1-216ENST00000473714 RAB15P59190 212 aa4.47□□□□□ -1.69
CALD1-216ENST00000473714 TRIM52Q96A61 297 aa4.47□□□□□ -1.69
CALD1-216ENST00000473714 KLRG1Q96E93 195 aa4.47□□□□□ -1.69
CALD1-216ENST00000473714 GOLGA2P5Q9HBQ8 144 aa4.47□□□□□ -1.69
CALD1-216ENST00000473714 ZFP64Q9NPA5 681 aa4.47□□□□□ -1.69
CALD1-216ENST00000473714 NOP53Q9NZM5 478 aaKnown RBP4.47□□□□□ -1.69
CALD1-216ENST00000473714 GAPVD1Q14C86 1478 aa4.47□□□□□ -1.69
CALD1-216ENST00000473714 BAZ1BQ9UIG0 1483 aaKnown RBP4.47□□□□□ -1.69
CALD1-216ENST00000473714 IFT140Q96RY7 1462 aa4.46□□□□□ -1.7
CALD1-216ENST00000473714 LILRA1O75019 489 aa4.46□□□□□ -1.7
CALD1-216ENST00000473714 CHRNA4P43681 627 aa4.46□□□□□ -1.7
CALD1-216ENST00000473714 GATA4P43694 442 aa4.46□□□□□ -1.7
CALD1-216ENST00000473714 NBPF20Q3BBV1 942 aa4.46□□□□□ -1.7
CALD1-216ENST00000473714 ARTNQ5T4W7 220 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms