RNA–Protein interactions for RNA: ENST00000468108.1

CCDC66-211, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-211ENST00000468108 FOXR1Q6PIV2 292 aa9.47□□□□□ -0.89
CCDC66-211ENST00000468108 ZNF784Q8NCA9 323 aaPredicted RBP9.47□□□□□ -0.89
CCDC66-211ENST00000468108 KDF1Q8NAX2 398 aaPredicted RBP9.46□□□□□ -0.9
CCDC66-211ENST00000468108 FKBPLQ9UIM3 349 aa9.46□□□□□ -0.9
CCDC66-211ENST00000468108 RHOQP17081 205 aa9.45□□□□□ -0.9
CCDC66-211ENST00000468108 PRICKLE2Q7Z3G6 844 aa9.45□□□□□ -0.9
CCDC66-211ENST00000468108 NACADO15069 1562 aa9.45□□□□□ -0.9
CCDC66-211ENST00000468108 KRBA1A5PL33 1030 aa9.44□□□□□ -0.9
CCDC66-211ENST00000468108 ADD1P35611 737 aaKnown RBP9.44□□□□□ -0.9
CCDC66-211ENST00000468108 LRRC4BQ9NT99 713 aa9.44□□□□□ -0.9
CCDC66-211ENST00000468108 KRTAP9-6A0A140TA67 174 aa9.43□□□□□ -0.9
CCDC66-211ENST00000468108 LILRA1O75019 489 aa9.43□□□□□ -0.9
CCDC66-211ENST00000468108 FURINP09958 794 aa9.43□□□□□ -0.9
CCDC66-211ENST00000468108 RAB15P59190 212 aa9.43□□□□□ -0.9
CCDC66-211ENST00000468108 DBN1Q16643 649 aa9.43□□□□□ -0.9
CCDC66-211ENST00000468108 RIPOR1Q6ZS17 1223 aa9.43□□□□□ -0.9
CCDC66-211ENST00000468108 NBPF20Q3BBV1 942 aa9.42□□□□□ -0.9
CCDC66-211ENST00000468108 GTPBP3Q969Y2 492 aaKnown RBP9.42□□□□□ -0.9
CCDC66-211ENST00000468108 OCSTAMPQ9BR26 566 aa9.42□□□□□ -0.9
CCDC66-211ENST00000468108 ZC3H4Q9UPT8 1303 aaKnown RBP9.41□□□□□ -0.9
CCDC66-211ENST00000468108 RNF144AP50876 292 aaPredicted RBP9.41□□□□□ -0.9
CCDC66-211ENST00000468108 TRIM66O15016 1216 aa9.4□□□□□ -0.9
CCDC66-211ENST00000468108 OIP5O43482 229 aa9.4□□□□□ -0.9
CCDC66-211ENST00000468108 SNRPNP63162 240 aaKnown RBP9.4□□□□□ -0.9
CCDC66-211ENST00000468108 CTDSPL2Q05D32 466 aa9.4□□□□□ -0.9
CCDC66-211ENST00000468108 TRERF1Q96PN7 1200 aa9.4□□□□□ -0.9
CCDC66-211ENST00000468108 H7C1W4 665 aa9.39□□□□□ -0.91
CCDC66-211ENST00000468108 ERVH48-1M5A8F1 160 aa9.39□□□□□ -0.91
CCDC66-211ENST00000468108 MX2P20592 715 aa9.39□□□□□ -0.91
CCDC66-211ENST00000468108 PTK2Q05397 1052 aa9.39□□□□□ -0.91
CCDC66-211ENST00000468108 ADAM32Q8TC27 787 aa9.39□□□□□ -0.91
CCDC66-211ENST00000468108 NSFL1CQ9UNZ2 370 aaKnown RBP9.39□□□□□ -0.91
CCDC66-211ENST00000468108 CLK2P49760 499 aaKnown RBP9.38□□□□□ -0.91
CCDC66-211ENST00000468108 LRRN4Q8WUT4 740 aa9.38□□□□□ -0.91
CCDC66-211ENST00000468108 ALYREFQ86V81 257 aaKnown RBP9.37□□□□□ -0.91
CCDC66-211ENST00000468108 MKL2Q9ULH7 1088 aa9.37□□□□□ -0.91
CCDC66-211ENST00000468108 DYRK1BQ9Y463 629 aa9.37□□□□□ -0.91
CCDC66-211ENST00000468108 GPSM3Q9Y4H4 160 aa9.37□□□□□ -0.91
CCDC66-211ENST00000468108 NR6A1Q15406 480 aa9.36□□□□□ -0.91
CCDC66-211ENST00000468108 AK7Q96M32 723 aa9.36□□□□□ -0.91
CCDC66-211ENST00000468108 OXCT2Q9BYC2 517 aaPredicted RBP9.36□□□□□ -0.91
CCDC66-211ENST00000468108 RB1CC1Q8TDY2 1594 aa9.36□□□□□ -0.91
CCDC66-211ENST00000468108 COL8A1P27658 744 aa9.35□□□□□ -0.91
CCDC66-211ENST00000468108 GAS2L1Q99501 681 aaPredicted RBP9.35□□□□□ -0.91
CCDC66-211ENST00000468108 SLC24A3Q9HC58 644 aa9.35□□□□□ -0.91
CCDC66-211ENST00000468108 SHISA8B8ZZ34 492 aa9.34□□□□□ -0.91
CCDC66-211ENST00000468108 CYLDQ9NQC7 956 aa9.34□□□□□ -0.91
CCDC66-211ENST00000468108 GPC1P35052 558 aa9.33□□□□□ -0.92
CCDC66-211ENST00000468108 ESPNB1AK53 854 aa9.32□□□□□ -0.92
CCDC66-211ENST00000468108 MAP2K3P46734 347 aa9.32□□□□□ -0.92
CCDC66-211ENST00000468108 KRTAP1-3Q8IUG1 177 aa9.32□□□□□ -0.92
CCDC66-211ENST00000468108 ATP5J2-PTCD1G3V325 749 aa9.31□□□□□ -0.92
CCDC66-211ENST00000468108 MEN1O00255 615 aa9.31□□□□□ -0.92
CCDC66-211ENST00000468108 POU4F2Q12837 409 aa9.31□□□□□ -0.92
CCDC66-211ENST00000468108 DZIP3Q86Y13 1208 aaKnown RBP9.31□□□□□ -0.92
CCDC66-211ENST00000468108 RRAGCQ9HB90 399 aa9.31□□□□□ -0.92
CCDC66-211ENST00000468108 SHROOM4Q9ULL8 1493 aa9.31□□□□□ -0.92
CCDC66-211ENST00000468108 GRIN2CQ14957 1233 aa9.3□□□□□ -0.92
CCDC66-211ENST00000468108 NUCKS1Q9H1E3 243 aaKnown RBP9.3□□□□□ -0.92
CCDC66-211ENST00000468108 POLR3EQ9NVU0 708 aa9.3□□□□□ -0.92
CCDC66-211ENST00000468108 PPP2R2DQ66LE6 453 aa9.29□□□□□ -0.92
CCDC66-211ENST00000468108 C1orf229Q6ZS94 237 aaPredicted RBP9.29□□□□□ -0.92
CCDC66-211ENST00000468108 TRIM52Q96A61 297 aa9.28□□□□□ -0.92
CCDC66-211ENST00000468108 PDE4DQ08499 809 aa9.27□□□□□ -0.93
CCDC66-211ENST00000468108 SLC27A3Q5K4L6 730 aa9.27□□□□□ -0.93
CCDC66-211ENST00000468108 NBPF10Q6P3W6 841 aaKnown RBP9.27□□□□□ -0.93
CCDC66-211ENST00000468108 SEPT12Q8IYM1 358 aa9.27□□□□□ -0.93
CCDC66-211ENST00000468108 NBPF15Q8N660 670 aa9.27□□□□□ -0.93
CCDC66-211ENST00000468108 A0A1W2PRU2 124 aa9.26□□□□□ -0.93
CCDC66-211ENST00000468108 EDARADDQ8WWZ3 215 aa9.26□□□□□ -0.93
CCDC66-211ENST00000468108 KLRG1Q96E93 195 aa9.26□□□□□ -0.93
CCDC66-211ENST00000468108 RSPH6AQ9H0K4 717 aa9.26□□□□□ -0.93
CCDC66-211ENST00000468108 SUV39H2Q9H5I1 410 aa9.26□□□□□ -0.93
CCDC66-211ENST00000468108 GDF2Q9UK05 429 aaPredicted RBP9.26□□□□□ -0.93
CCDC66-211ENST00000468108 C1QTNF9BB2RNN3 333 aa9.25□□□□□ -0.93
CCDC66-211ENST00000468108 ITGB7P26010 798 aa9.25□□□□□ -0.93
CCDC66-211ENST00000468108 CFHR5Q9BXR6 569 aa9.25□□□□□ -0.93
CCDC66-211ENST00000468108 F11P03951 625 aa9.24□□□□□ -0.93
CCDC66-211ENST00000468108 LINC00114Q6XXX2 140 aa9.24□□□□□ -0.93
CCDC66-211ENST00000468108 NLRP3Q96P20 1036 aa9.24□□□□□ -0.93
CCDC66-211ENST00000468108 TIMMDC1Q9NPL8 285 aa9.24□□□□□ -0.93
CCDC66-211ENST00000468108 SPATA31C2B4DYI2 1134 aa9.23□□□□□ -0.93
CCDC66-211ENST00000468108 TPRNQ4KMQ1 711 aa9.23□□□□□ -0.93
CCDC66-211ENST00000468108 CD163Q86VB7 1156 aa9.23□□□□□ -0.93
CCDC66-211ENST00000468108 PNMA1Q8ND90 353 aa9.23□□□□□ -0.93
CCDC66-211ENST00000468108 EPS8L1Q8TE68 723 aa9.23□□□□□ -0.93
CCDC66-211ENST00000468108 GRIP2Q9C0E4 1043 aa9.23□□□□□ -0.93
CCDC66-211ENST00000468108 SCRIBQ14160 1630 aa9.23□□□□□ -0.93
CCDC66-211ENST00000468108 THBS1P07996 1170 aa9.22□□□□□ -0.93
CCDC66-211ENST00000468108 HOXB4P17483 251 aaPredicted RBP9.22□□□□□ -0.93
CCDC66-211ENST00000468108 WDR44Q5JSH3 913 aa9.22□□□□□ -0.93
CCDC66-211ENST00000468108 PIK3R2O00459 728 aa9.21□□□□□ -0.94
CCDC66-211ENST00000468108 AMPD1P23109 780 aa9.21□□□□□ -0.94
CCDC66-211ENST00000468108 CHRNA4P43681 627 aa9.21□□□□□ -0.94
CCDC66-211ENST00000468108 ZMYM1Q5SVZ6 1142 aa9.21□□□□□ -0.94
CCDC66-211ENST00000468108 FBXO31Q5XUX0 539 aaPredicted RBP9.21□□□□□ -0.94
CCDC66-211ENST00000468108 TAS1R3Q7RTX0 852 aa9.21□□□□□ -0.94
CCDC66-211ENST00000468108 GOLGA6L1Q8N7Z2 621 aa9.21□□□□□ -0.94
CCDC66-211ENST00000468108 SEMA6BQ9H3T3 888 aa9.21□□□□□ -0.94
CCDC66-211ENST00000468108 PHF24Q9UPV7 400 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms