RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 NUDT12Q9BQG2 462 aa6.66□□□□□ -1.34
MSH2-205ENST00000467323 CHMP4AQ9BY43 222 aa6.66□□□□□ -1.34
MSH2-205ENST00000467323 METTL5Q9NRN9 209 aaKnown RBP6.66□□□□□ -1.34
MSH2-205ENST00000467323 CUEDC1Q9NWM3 386 aaPredicted RBP6.66□□□□□ -1.34
MSH2-205ENST00000467323 PCDHGA11Q9Y5H2 935 aa6.66□□□□□ -1.34
MSH2-205ENST00000467323 ARHGAP33O14559 1287 aa6.65□□□□□ -1.34
MSH2-205ENST00000467323 NPR3P17342 541 aa6.65□□□□□ -1.34
MSH2-205ENST00000467323 FKBP5Q13451 457 aaPredicted RBP6.65□□□□□ -1.34
MSH2-205ENST00000467323 C9orf131Q5VYM1 1079 aa6.65□□□□□ -1.34
MSH2-205ENST00000467323 TMC7Q7Z402 723 aa6.65□□□□□ -1.34
MSH2-205ENST00000467323 SCUBE3Q8IX30 993 aa6.65□□□□□ -1.34
MSH2-205ENST00000467323 SLC43A3Q8NBI5 491 aa6.65□□□□□ -1.34
MSH2-205ENST00000467323 LRCH3Q96II8 777 aa6.65□□□□□ -1.34
MSH2-205ENST00000467323 HIRIP3Q9BW71 556 aaPredicted RBP6.65□□□□□ -1.34
MSH2-205ENST00000467323 NLRP2Q9NX02 1062 aa6.65□□□□□ -1.34
MSH2-205ENST00000467323 SNPHO15079 494 aa6.64□□□□□ -1.35
MSH2-205ENST00000467323 TREHO43280 583 aa6.64□□□□□ -1.35
MSH2-205ENST00000467323 PRPF40AO75400 957 aaKnown RBP6.64□□□□□ -1.35
MSH2-205ENST00000467323 LDHBP07195 334 aaKnown RBP6.64□□□□□ -1.35
MSH2-205ENST00000467323 FMR1Q06787 632 aaKnown RBP eCLIP6.64□□□□□ -1.35
MSH2-205ENST00000467323 RAD51AP2Q09MP3 1159 aa6.64□□□□□ -1.35
MSH2-205ENST00000467323 GNL2Q13823 731 aaKnown RBP6.64□□□□□ -1.35
MSH2-205ENST00000467323 MSS51Q4VC12 460 aa6.64□□□□□ -1.35
MSH2-205ENST00000467323 GIMAP6Q6P9H5 292 aa6.64□□□□□ -1.35
MSH2-205ENST00000467323 NT5DC4Q86YG4 428 aa6.64□□□□□ -1.35
MSH2-205ENST00000467323 THAP11Q96EK4 314 aa6.64□□□□□ -1.35
MSH2-205ENST00000467323 ZFRQ96KR1 1074 aaKnown RBP6.64□□□□□ -1.35
MSH2-205ENST00000467323 TGIF2Q9GZN2 237 aa6.64□□□□□ -1.35
MSH2-205ENST00000467323 CCSER2Q9H7U1 834 aa6.64□□□□□ -1.35
MSH2-205ENST00000467323 BRPF3Q9ULD4 1205 aa6.64□□□□□ -1.35
MSH2-205ENST00000467323 FOXO3O43524 673 aa6.63□□□□□ -1.35
MSH2-205ENST00000467323 SORBS3O60504 671 aa6.63□□□□□ -1.35
MSH2-205ENST00000467323 EIF5BO60841 1220 aaKnown RBP6.63□□□□□ -1.35
MSH2-205ENST00000467323 GIGYF1O75420 1035 aaPredicted RBP6.63□□□□□ -1.35
MSH2-205ENST00000467323 DXOO77932 396 aaKnown RBP6.63□□□□□ -1.35
MSH2-205ENST00000467323 ATP2B1P20020 1258 aa6.63□□□□□ -1.35
MSH2-205ENST00000467323 SH3BP5LQ7L8J4 393 aa6.63□□□□□ -1.35
MSH2-205ENST00000467323 TMC1Q8TDI8 760 aa6.63□□□□□ -1.35
MSH2-205ENST00000467323 RNF34Q969K3 372 aa6.63□□□□□ -1.35
MSH2-205ENST00000467323 ARMC5Q96C12 935 aa6.63□□□□□ -1.35
MSH2-205ENST00000467323 DMRTB1Q96MA1 342 aa6.63□□□□□ -1.35
MSH2-205ENST00000467323 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.63□□□□□ -1.35
MSH2-205ENST00000467323 PARP2Q9UGN5 583 aa6.63□□□□□ -1.35
MSH2-205ENST00000467323 TMA7Q9Y2S6 64 aaKnown RBP6.63□□□□□ -1.35
MSH2-205ENST00000467323 IGFBP4P22692 258 aa6.62□□□□□ -1.35
MSH2-205ENST00000467323 ATP2B2Q01814 1243 aa6.62□□□□□ -1.35
MSH2-205ENST00000467323 PLCB3Q01970 1234 aa6.62□□□□□ -1.35
MSH2-205ENST00000467323 NAA30Q147X3 362 aaPredicted RBP6.62□□□□□ -1.35
MSH2-205ENST00000467323 NBPF20Q3BBV1 942 aa6.62□□□□□ -1.35
MSH2-205ENST00000467323 TMC4Q7Z404 712 aa6.62□□□□□ -1.35
MSH2-205ENST00000467323 TSEN2Q8NCE0 465 aaKnown RBP6.62□□□□□ -1.35
MSH2-205ENST00000467323 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.62□□□□□ -1.35
MSH2-205ENST00000467323 PRKAG2Q9UGJ0 569 aa6.62□□□□□ -1.35
MSH2-205ENST00000467323 VPS9D1Q9Y2B5 631 aa6.62□□□□□ -1.35
MSH2-205ENST00000467323 LGR5O75473 907 aa6.61□□□□□ -1.35
MSH2-205ENST00000467323 POTEIP0CG38 1075 aa6.61□□□□□ -1.35
MSH2-205ENST00000467323 LDLRAD1Q5T700 205 aa6.61□□□□□ -1.35
MSH2-205ENST00000467323 ALKBH2Q6NS38 261 aa6.61□□□□□ -1.35
MSH2-205ENST00000467323 CAPN12Q6ZSI9 719 aa6.61□□□□□ -1.35
MSH2-205ENST00000467323 METTL16Q86W50 562 aaKnown RBP6.61□□□□□ -1.35
MSH2-205ENST00000467323 VTI1AQ96AJ9 217 aa6.61□□□□□ -1.35
MSH2-205ENST00000467323 DNAJC2Q99543 621 aaKnown RBP6.61□□□□□ -1.35
MSH2-205ENST00000467323 TINF2Q9BSI4 451 aa6.61□□□□□ -1.35
MSH2-205ENST00000467323 CARD14Q9BXL6 1004 aa6.61□□□□□ -1.35
MSH2-205ENST00000467323 PRKD2Q9BZL6 878 aa6.61□□□□□ -1.35
MSH2-205ENST00000467323 VTI1BQ9UEU0 232 aa6.61□□□□□ -1.35
MSH2-205ENST00000467323 PCDHB3Q9Y5E6 796 aa6.61□□□□□ -1.35
MSH2-205ENST00000467323 PCDHB11Q9Y5F2 797 aa6.61□□□□□ -1.35
MSH2-205ENST00000467323 MAGEB6P1A0A0J9YX57 407 aa6.6□□□□□ -1.35
MSH2-205ENST00000467323 MYCP01106 439 aaPredicted RBP6.6□□□□□ -1.35
MSH2-205ENST00000467323 MPSTP25325 297 aa6.6□□□□□ -1.35
MSH2-205ENST00000467323 ZNF76P36508 570 aa6.6□□□□□ -1.35
MSH2-205ENST00000467323 MAPK8P45983 427 aa6.6□□□□□ -1.35
MSH2-205ENST00000467323 MMP16P51512 607 aa6.6□□□□□ -1.35
MSH2-205ENST00000467323 PSMD2Q13200 908 aa6.6□□□□□ -1.35
MSH2-205ENST00000467323 PDE3BQ13370 1112 aa6.6□□□□□ -1.35
MSH2-205ENST00000467323 SEPT12Q8IYM1 358 aa6.6□□□□□ -1.35
MSH2-205ENST00000467323 DUSP9Q99956 384 aaKnown RBP6.6□□□□□ -1.35
MSH2-205ENST00000467323 LNPKQ9C0E8 428 aa6.6□□□□□ -1.35
MSH2-205ENST00000467323 CAPN10Q9HC96 672 aa6.6□□□□□ -1.35
MSH2-205ENST00000467323 SCUBE2Q9NQ36 999 aa6.6□□□□□ -1.35
MSH2-205ENST00000467323 GTF2F1P35269 517 aaKnown RBP eCLIP6.59□□□□□ -1.35
MSH2-205ENST00000467323 PBX2P40425 430 aa6.59□□□□□ -1.35
MSH2-205ENST00000467323 DAB2P98082 770 aa6.59□□□□□ -1.35
MSH2-205ENST00000467323 FANCCQ00597 558 aa6.59□□□□□ -1.35
MSH2-205ENST00000467323 EHHADHQ08426 723 aa6.59□□□□□ -1.35
MSH2-205ENST00000467323 AAMPQ13685 434 aa6.59□□□□□ -1.35
MSH2-205ENST00000467323 DSC3Q14574 896 aa6.59□□□□□ -1.35
MSH2-205ENST00000467323 DMRTA1Q5VZB9 504 aa6.59□□□□□ -1.35
MSH2-205ENST00000467323 BPHLQ86WA6 291 aaPredicted RBP6.59□□□□□ -1.35
MSH2-205ENST00000467323 GAS2L2Q8NHY3 880 aa6.59□□□□□ -1.35
MSH2-205ENST00000467323 SLC10A4Q96EP9 437 aa6.59□□□□□ -1.35
MSH2-205ENST00000467323 PURBQ96QR8 312 aaKnown RBP6.59□□□□□ -1.35
MSH2-205ENST00000467323 UNC93B1Q9H1C4 597 aa6.59□□□□□ -1.35
MSH2-205ENST00000467323 CDV3Q9UKY7 258 aaKnown RBP6.59□□□□□ -1.35
MSH2-205ENST00000467323 PPP4CP60510 307 aa6.58□□□□□ -1.36
MSH2-205ENST00000467323 SOGA3Q5TF21 947 aa6.58□□□□□ -1.36
MSH2-205ENST00000467323 SH3RF1Q7Z6J0 888 aa6.58□□□□□ -1.36
MSH2-205ENST00000467323 MRPL50Q8N5N7 158 aaKnown RBP6.58□□□□□ -1.36
MSH2-205ENST00000467323 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms