RNA–Protein interactions for RNA: ENST00000464266.1

HOXB3-203, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-203ENST00000464266 EVA1BQ9NVM1 165 aa7.75□□□□□ -1.17
HOXB3-203ENST00000464266 SEPT3Q9UH03 358 aa7.75□□□□□ -1.17
HOXB3-203ENST00000464266 DNMT3AQ9Y6K1 912 aaPredicted RBP7.75□□□□□ -1.17
HOXB3-203ENST00000464266 ERCC5P28715 1186 aaPredicted RBP7.74□□□□□ -1.17
HOXB3-203ENST00000464266 RGL4Q8IZJ4 473 aa7.74□□□□□ -1.17
HOXB3-203ENST00000464266 LRCH3Q96II8 777 aa7.74□□□□□ -1.17
HOXB3-203ENST00000464266 CCDC85AQ96PX6 553 aaPredicted RBP7.74□□□□□ -1.17
HOXB3-203ENST00000464266 MKNK1Q9BUB5 465 aa7.74□□□□□ -1.17
HOXB3-203ENST00000464266 SMARCA5O60264 1052 aaPredicted RBP7.73□□□□□ -1.17
HOXB3-203ENST00000464266 NR1I2O75469 434 aa7.73□□□□□ -1.17
HOXB3-203ENST00000464266 ARHGAP4P98171 946 aa7.73□□□□□ -1.17
HOXB3-203ENST00000464266 DMRTA1Q5VZB9 504 aa7.73□□□□□ -1.17
HOXB3-203ENST00000464266 SCUBE3Q8IX30 993 aa7.73□□□□□ -1.17
HOXB3-203ENST00000464266 NUDT12Q9BQG2 462 aa7.73□□□□□ -1.17
HOXB3-203ENST00000464266 VPS9D1Q9Y2B5 631 aa7.73□□□□□ -1.17
HOXB3-203ENST00000464266 PTCD1O75127 700 aaKnown RBP7.72□□□□□ -1.17
HOXB3-203ENST00000464266 LGR5O75473 907 aa7.72□□□□□ -1.17
HOXB3-203ENST00000464266 ECM1Q16610 540 aa7.72□□□□□ -1.17
HOXB3-203ENST00000464266 THAP11Q96EK4 314 aa7.72□□□□□ -1.17
HOXB3-203ENST00000464266 SPATA32Q96LK8 384 aa7.72□□□□□ -1.17
HOXB3-203ENST00000464266 BACH2Q9BYV9 841 aa7.72□□□□□ -1.17
HOXB3-203ENST00000464266 SCUBE2Q9NQ36 999 aa7.72□□□□□ -1.17
HOXB3-203ENST00000464266 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.72□□□□□ -1.17
HOXB3-203ENST00000464266 CHD1O14646 1710 aa7.72□□□□□ -1.17
HOXB3-203ENST00000464266 SCAMP3O14828 347 aaKnown RBP7.71□□□□□ -1.18
HOXB3-203ENST00000464266 PPM1GO15355 546 aaPredicted RBP7.71□□□□□ -1.18
HOXB3-203ENST00000464266 MTMR3Q13615 1198 aa7.71□□□□□ -1.18
HOXB3-203ENST00000464266 RNF20Q5VTR2 975 aa7.71□□□□□ -1.18
HOXB3-203ENST00000464266 GIGYF1O75420 1035 aaPredicted RBP7.7□□□□□ -1.18
HOXB3-203ENST00000464266 DXOO77932 396 aaKnown RBP7.7□□□□□ -1.18
HOXB3-203ENST00000464266 POTEJP0CG39 1038 aa7.7□□□□□ -1.18
HOXB3-203ENST00000464266 PCDHB3Q9Y5E6 796 aa7.7□□□□□ -1.18
HOXB3-203ENST00000464266 PCDHGA11Q9Y5H2 935 aa7.7□□□□□ -1.18
HOXB3-203ENST00000464266 FANCD2Q9BXW9 1451 aa7.69□□□□□ -1.18
HOXB3-203ENST00000464266 URB2Q14146 1524 aaKnown RBP7.69□□□□□ -1.18
HOXB3-203ENST00000464266 WEE1P30291 646 aa7.69□□□□□ -1.18
HOXB3-203ENST00000464266 USP4Q13107 963 aa7.69□□□□□ -1.18
HOXB3-203ENST00000464266 MSS51Q4VC12 460 aa7.69□□□□□ -1.18
HOXB3-203ENST00000464266 SH3BP5LQ7L8J4 393 aa7.69□□□□□ -1.18
HOXB3-203ENST00000464266 CARD14Q9BXL6 1004 aa7.69□□□□□ -1.18
HOXB3-203ENST00000464266 AXIN2Q9Y2T1 843 aa7.69□□□□□ -1.18
HOXB3-203ENST00000464266 ZNF608Q9ULD9 1512 aaPredicted RBP7.68□□□□□ -1.18
HOXB3-203ENST00000464266 EIF4G3O43432 1585 aaKnown RBP7.68□□□□□ -1.18
HOXB3-203ENST00000464266 P4HBP07237 508 aaKnown RBP7.68□□□□□ -1.18
HOXB3-203ENST00000464266 HDLBPQ00341 1268 aaKnown RBP7.68□□□□□ -1.18
HOXB3-203ENST00000464266 FKBP5Q13451 457 aaPredicted RBP7.68□□□□□ -1.18
HOXB3-203ENST00000464266 MRPL58Q14197 206 aaKnown RBP7.68□□□□□ -1.18
HOXB3-203ENST00000464266 POTEEQ6S8J3 1075 aa7.68□□□□□ -1.18
HOXB3-203ENST00000464266 MAMSTRQ6ZN01 415 aa7.68□□□□□ -1.18
HOXB3-203ENST00000464266 CAPN12Q6ZSI9 719 aa7.68□□□□□ -1.18
HOXB3-203ENST00000464266 MRPL50Q8N5N7 158 aaKnown RBP7.68□□□□□ -1.18
HOXB3-203ENST00000464266 HELQQ8TDG4 1101 aa7.68□□□□□ -1.18
HOXB3-203ENST00000464266 ERCC6L2Q5T890 1561 aa7.67□□□□□ -1.18
HOXB3-203ENST00000464266 MAGEB6P1A0A0J9YX57 407 aa7.67□□□□□ -1.18
HOXB3-203ENST00000464266 FAM13AO94988 1023 aa7.67□□□□□ -1.18
HOXB3-203ENST00000464266 PPP4CP60510 307 aa7.67□□□□□ -1.18
HOXB3-203ENST00000464266 C9orf131Q5VYM1 1079 aa7.67□□□□□ -1.18
HOXB3-203ENST00000464266 TSEN2Q8NCE0 465 aaKnown RBP7.67□□□□□ -1.18
HOXB3-203ENST00000464266 COL26A1Q96A83 441 aa7.67□□□□□ -1.18
HOXB3-203ENST00000464266 RBCK1Q9BYM8 510 aa7.67□□□□□ -1.18
HOXB3-203ENST00000464266 BHMG1C9JSJ3 638 aaPredicted RBP7.66□□□□□ -1.18
HOXB3-203ENST00000464266 M0R2N6 131 aa7.66□□□□□ -1.18
HOXB3-203ENST00000464266 NDUFB5O43674 189 aa7.66□□□□□ -1.18
HOXB3-203ENST00000464266 ITGAEP38570 1179 aa7.66□□□□□ -1.18
HOXB3-203ENST00000464266 PBX2P40425 430 aa7.66□□□□□ -1.18
HOXB3-203ENST00000464266 FGD1P98174 961 aa7.66□□□□□ -1.18
HOXB3-203ENST00000464266 XPCQ01831 940 aaPredicted RBP7.66□□□□□ -1.18
HOXB3-203ENST00000464266 NAA30Q147X3 362 aaPredicted RBP7.66□□□□□ -1.18
HOXB3-203ENST00000464266 TMC7Q7Z402 723 aa7.66□□□□□ -1.18
HOXB3-203ENST00000464266 PCDHB11Q9Y5F2 797 aa7.66□□□□□ -1.18
HOXB3-203ENST00000464266 MMP16P51512 607 aa7.65□□□□□ -1.18
HOXB3-203ENST00000464266 APLP1P51693 650 aa7.65□□□□□ -1.18
HOXB3-203ENST00000464266 NBPF20Q3BBV1 942 aa7.65□□□□□ -1.18
HOXB3-203ENST00000464266 TMC1Q8TDI8 760 aa7.65□□□□□ -1.18
HOXB3-203ENST00000464266 PIK3R5Q8WYR1 880 aa7.65□□□□□ -1.18
HOXB3-203ENST00000464266 PURBQ96QR8 312 aaKnown RBP7.65□□□□□ -1.18
HOXB3-203ENST00000464266 IFT140Q96RY7 1462 aa7.65□□□□□ -1.18
HOXB3-203ENST00000464266 SPSB2Q99619 263 aa7.65□□□□□ -1.18
HOXB3-203ENST00000464266 UNC93B1Q9H1C4 597 aa7.65□□□□□ -1.18
HOXB3-203ENST00000464266 MRS2Q9HD23 443 aa7.65□□□□□ -1.18
HOXB3-203ENST00000464266 CLASP1Q7Z460 1538 aa7.64□□□□□ -1.19
HOXB3-203ENST00000464266 ERBB3P21860 1342 aa7.64□□□□□ -1.19
HOXB3-203ENST00000464266 NCLP19338 710 aaKnown RBP7.64□□□□□ -1.19
HOXB3-203ENST00000464266 AGERQ15109 404 aa7.64□□□□□ -1.19
HOXB3-203ENST00000464266 VARS2Q5ST30 1063 aaKnown RBP7.64□□□□□ -1.19
HOXB3-203ENST00000464266 FAM160A2Q8N612 972 aaPredicted RBP7.64□□□□□ -1.19
HOXB3-203ENST00000464266 TMEM87AQ8NBN3 555 aa7.64□□□□□ -1.19
HOXB3-203ENST00000464266 SLC10A4Q96EP9 437 aa7.64□□□□□ -1.19
HOXB3-203ENST00000464266 BRPF3Q9ULD4 1205 aa7.64□□□□□ -1.19
HOXB3-203ENST00000464266 FOXO3O43524 673 aa7.63□□□□□ -1.19
HOXB3-203ENST00000464266 NPR3P17342 541 aa7.63□□□□□ -1.19
HOXB3-203ENST00000464266 IGFBP4P22692 258 aa7.63□□□□□ -1.19
HOXB3-203ENST00000464266 FMR1Q06787 632 aaKnown RBP eCLIP7.63□□□□□ -1.191e-8■□□□□ 9.5
HOXB3-203ENST00000464266 BPHLQ86WA6 291 aaPredicted RBP7.63□□□□□ -1.19
HOXB3-203ENST00000464266 CCDC24Q8N4L8 307 aa7.63□□□□□ -1.19
HOXB3-203ENST00000464266 VTI1AQ96AJ9 217 aa7.63□□□□□ -1.19
HOXB3-203ENST00000464266 TANGO6Q9C0B7 1094 aa7.63□□□□□ -1.19
HOXB3-203ENST00000464266 PRDM9Q9NQV7 894 aa7.63□□□□□ -1.19
HOXB3-203ENST00000464266 HPS5Q9UPZ3 1129 aa7.63□□□□□ -1.19
HOXB3-203ENST00000464266 TREHO43280 583 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms