RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 LYSMD3Q7Z3D4 306 aa7.49□□□□□ -1.21
HMGB3P9-201ENST00000441799 TRIM34Q9BYJ4 488 aa7.49□□□□□ -1.21
HMGB3P9-201ENST00000441799 CYLDQ9NQC7 956 aa7.49□□□□□ -1.21
HMGB3P9-201ENST00000441799 CELA2BP08218 269 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P9-201ENST00000441799 RHOQP17081 205 aa7.48□□□□□ -1.21
HMGB3P9-201ENST00000441799 RNF144AP50876 292 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P9-201ENST00000441799 MARSP56192 900 aaKnown RBP7.48□□□□□ -1.21
HMGB3P9-201ENST00000441799 PRICKLE2Q7Z3G6 844 aa7.48□□□□□ -1.21
HMGB3P9-201ENST00000441799 DDRGK1Q96HY6 314 aa7.48□□□□□ -1.21
HMGB3P9-201ENST00000441799 DNMT3AQ9Y6K1 912 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P9-201ENST00000441799 RFC5P40937 340 aa7.47□□□□□ -1.21
HMGB3P9-201ENST00000441799 GPAT2Q6NUI2 795 aa7.47□□□□□ -1.21
HMGB3P9-201ENST00000441799 BCANQ96GW7 911 aa7.47□□□□□ -1.21
HMGB3P9-201ENST00000441799 PODXL2Q9NZ53 605 aa7.47□□□□□ -1.21
HMGB3P9-201ENST00000441799 ATP1B4Q9UN42 357 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P9-201ENST00000441799 GIGYF1O75420 1035 aaPredicted RBP7.46□□□□□ -1.22
HMGB3P9-201ENST00000441799 DBN1Q16643 649 aa7.46□□□□□ -1.22
HMGB3P9-201ENST00000441799 KANK3Q6NY19 840 aa7.46□□□□□ -1.22
HMGB3P9-201ENST00000441799 SEPT12Q8IYM1 358 aa7.45□□□□□ -1.22
HMGB3P9-201ENST00000441799 PNMA1Q8ND90 353 aa7.45□□□□□ -1.22
HMGB3P9-201ENST00000441799 ZNF837Q96EG3 531 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P9-201ENST00000441799 SCARF2Q96GP6 870 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P9-201ENST00000441799 TRIM22Q8IYM9 498 aa7.44□□□□□ -1.22
HMGB3P9-201ENST00000441799 GPR25O00155 361 aa7.43□□□□□ -1.22
HMGB3P9-201ENST00000441799 IGHA1P01876 353 aa7.43□□□□□ -1.22
HMGB3P9-201ENST00000441799 A0A1W2PRU2 124 aa7.42□□□□□ -1.22
HMGB3P9-201ENST00000441799 ATP5J2-PTCD1G3V325 749 aa7.42□□□□□ -1.22
HMGB3P9-201ENST00000441799 ZBBXA8MT70 800 aa7.41□□□□□ -1.22
HMGB3P9-201ENST00000441799 MEN1O00255 615 aa7.41□□□□□ -1.22
HMGB3P9-201ENST00000441799 ITGB2P05107 769 aa7.41□□□□□ -1.22
HMGB3P9-201ENST00000441799 FBXO45P0C2W1 286 aa7.41□□□□□ -1.22
HMGB3P9-201ENST00000441799 MAP3K10Q02779 954 aa7.41□□□□□ -1.22
HMGB3P9-201ENST00000441799 POU4F2Q12837 409 aa7.41□□□□□ -1.22
HMGB3P9-201ENST00000441799 GMCL1Q96IK5 515 aa7.41□□□□□ -1.22
HMGB3P9-201ENST00000441799 GJD4Q96KN9 370 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P9-201ENST00000441799 MBIPQ9NS73 344 aa7.41□□□□□ -1.22
HMGB3P9-201ENST00000441799 CNTNAP5Q8WYK1 1306 aa7.41□□□□□ -1.22
HMGB3P9-201ENST00000441799 IGF1RP08069 1367 aa7.41□□□□□ -1.22
HMGB3P9-201ENST00000441799 GPC1P35052 558 aa7.4□□□□□ -1.22
HMGB3P9-201ENST00000441799 ERVK-9P63128 1117 aa7.4□□□□□ -1.22
HMGB3P9-201ENST00000441799 FOXK2Q01167 660 aa7.4□□□□□ -1.22
HMGB3P9-201ENST00000441799 FAM9AQ8IZU1 332 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P9-201ENST00000441799 ACDQ96AP0 544 aa7.4□□□□□ -1.22
HMGB3P9-201ENST00000441799 GRIP2Q9C0E4 1043 aa7.4□□□□□ -1.22
HMGB3P9-201ENST00000441799 DYRK1BQ9Y463 629 aa7.4□□□□□ -1.22
HMGB3P9-201ENST00000441799 PCDHB9Q9Y5E1 797 aa7.4□□□□□ -1.22
HMGB3P9-201ENST00000441799 RIPOR1Q6ZS17 1223 aa7.39□□□□□ -1.23
HMGB3P9-201ENST00000441799 GTPBP3Q969Y2 492 aaKnown RBP7.39□□□□□ -1.23
HMGB3P9-201ENST00000441799 BCRP11274 1271 aa7.38□□□□□ -1.23
HMGB3P9-201ENST00000441799 SCTRP47872 440 aa7.38□□□□□ -1.23
HMGB3P9-201ENST00000441799 TMEM259Q4ZIN3 620 aa7.38□□□□□ -1.23
HMGB3P9-201ENST00000441799 CC2D2BQ6DHV5 1058 aa7.38□□□□□ -1.23
HMGB3P9-201ENST00000441799 DCAF5Q96JK2 942 aa7.38□□□□□ -1.23
HMGB3P9-201ENST00000441799 TPRNQ4KMQ1 711 aa7.37□□□□□ -1.23
HMGB3P9-201ENST00000441799 NBPF10Q6P3W6 841 aaKnown RBP7.37□□□□□ -1.23
HMGB3P9-201ENST00000441799 NPM2Q86SE8 214 aaKnown RBP7.37□□□□□ -1.23
HMGB3P9-201ENST00000441799 NBPF15Q8N660 670 aa7.37□□□□□ -1.23
HMGB3P9-201ENST00000441799 GOPCQ9HD26 462 aa7.37□□□□□ -1.23
HMGB3P9-201ENST00000441799 ENAMQ9NRM1 1142 aa7.37□□□□□ -1.23
HMGB3P9-201ENST00000441799 GTF3C3Q9Y5Q9 886 aa7.37□□□□□ -1.23
HMGB3P9-201ENST00000441799 CLN3Q13286 438 aa7.36□□□□□ -1.23
HMGB3P9-201ENST00000441799 PLA2G4EQ3MJ16 856 aa7.36□□□□□ -1.23
HMGB3P9-201ENST00000441799 FOXR1Q6PIV2 292 aa7.36□□□□□ -1.23
HMGB3P9-201ENST00000441799 GAS2L1Q99501 681 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P9-201ENST00000441799 OSBPL3Q9H4L5 887 aa7.36□□□□□ -1.23
HMGB3P9-201ENST00000441799 SPATA31C2B4DYI2 1134 aa7.35□□□□□ -1.23
HMGB3P9-201ENST00000441799 TRAK2O60296 914 aa7.35□□□□□ -1.23
HMGB3P9-201ENST00000441799 THBS1P07996 1170 aa7.35□□□□□ -1.23
HMGB3P9-201ENST00000441799 CCDC125Q86Z20 511 aa7.35□□□□□ -1.23
HMGB3P9-201ENST00000441799 BEND7Q8N7W2 519 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P9-201ENST00000441799 H7C1W4 665 aa7.34□□□□□ -1.23
HMGB3P9-201ENST00000441799 GPR37L1O60883 481 aa7.34□□□□□ -1.23
HMGB3P9-201ENST00000441799 WDR44Q5JSH3 913 aa7.34□□□□□ -1.23
HMGB3P9-201ENST00000441799 SLC27A3Q5K4L6 730 aa7.34□□□□□ -1.23
HMGB3P9-201ENST00000441799 TRIM52Q96A61 297 aa7.34□□□□□ -1.23
HMGB3P9-201ENST00000441799 PCMTD1Q96MG8 357 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P9-201ENST00000441799 NLRP3Q96P20 1036 aa7.34□□□□□ -1.23
HMGB3P9-201ENST00000441799 NISCHQ9Y2I1 1504 aa7.33□□□□□ -1.24
HMGB3P9-201ENST00000441799 PHF20L1A8MW92 1017 aa7.33□□□□□ -1.24
HMGB3P9-201ENST00000441799 RNF20Q5VTR2 975 aa7.33□□□□□ -1.24
HMGB3P9-201ENST00000441799 NEDD1Q8NHV4 660 aa7.33□□□□□ -1.24
HMGB3P9-201ENST00000441799 SPOCK3Q9BQ16 436 aa7.33□□□□□ -1.24
HMGB3P9-201ENST00000441799 ARHGEF10LQ9HCE6 1279 aa7.33□□□□□ -1.24
HMGB3P9-201ENST00000441799 MSTNO14793 375 aa7.32□□□□□ -1.24
HMGB3P9-201ENST00000441799 F11P03951 625 aa7.32□□□□□ -1.24
HMGB3P9-201ENST00000441799 MX2P20592 715 aa7.32□□□□□ -1.24
HMGB3P9-201ENST00000441799 NR1H3Q13133 447 aa7.32□□□□□ -1.24
HMGB3P9-201ENST00000441799 CYP2U1Q7Z449 544 aa7.32□□□□□ -1.24
HMGB3P9-201ENST00000441799 TRERF1Q96PN7 1200 aa7.32□□□□□ -1.24
HMGB3P9-201ENST00000441799 TIMMDC1Q9NPL8 285 aa7.32□□□□□ -1.24
HMGB3P9-201ENST00000441799 LRRC4BQ9NT99 713 aa7.32□□□□□ -1.24
HMGB3P9-201ENST00000441799 PCDHB11Q9Y5F2 797 aa7.32□□□□□ -1.24
HMGB3P9-201ENST00000441799 OIP5O43482 229 aa7.31□□□□□ -1.24
HMGB3P9-201ENST00000441799 PROCP04070 461 aa7.31□□□□□ -1.24
HMGB3P9-201ENST00000441799 UBE2Q2Q8WVN8 375 aa7.31□□□□□ -1.24
HMGB3P9-201ENST00000441799 NUCKS1Q9H1E3 243 aaKnown RBP7.31□□□□□ -1.24
HMGB3P9-201ENST00000441799 WASLO00401 505 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P9-201ENST00000441799 ADAM23O75077 832 aa7.3□□□□□ -1.24
HMGB3P9-201ENST00000441799 IL2RAP01589 272 aa7.3□□□□□ -1.24
HMGB3P9-201ENST00000441799 MCCD1P59942 119 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms