RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 DDRGK1Q96HY6 314 aa10.2□□□□□ -0.78
LINC00458-201ENST00000423442 CHD1O14646 1710 aa10.19□□□□□ -0.78
LINC00458-201ENST00000423442 EIF4G3O43432 1585 aaKnown RBP10.19□□□□□ -0.78
LINC00458-201ENST00000423442 RNFT1Q5M7Z0 435 aa10.19□□□□□ -0.78
LINC00458-201ENST00000423442 NANOS1Q8WY41 292 aaKnown RBP10.19□□□□□ -0.78
LINC00458-201ENST00000423442 GPSM3Q9Y4H4 160 aa10.19□□□□□ -0.78
LINC00458-201ENST00000423442 PRDM2Q13029 1718 aa10.19□□□□□ -0.78
LINC00458-201ENST00000423442 VWA5B2Q8N398 1253 aa10.18□□□□□ -0.78
LINC00458-201ENST00000423442 ZNF784Q8NCA9 323 aaPredicted RBP10.18□□□□□ -0.78
LINC00458-201ENST00000423442 POLMQ9NP87 494 aaPredicted RBP10.18□□□□□ -0.78
LINC00458-201ENST00000423442 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
LINC00458-201ENST00000423442 USP17L8P0C7I0 530 aa10.17□□□□□ -0.78
LINC00458-201ENST00000423442 ITGA6P23229 1130 aa10.16□□□□□ -0.78
LINC00458-201ENST00000423442 ADD1P35611 737 aaKnown RBP10.16□□□□□ -0.78
LINC00458-201ENST00000423442 NBPF20Q3BBV1 942 aa10.16□□□□□ -0.78
LINC00458-201ENST00000423442 TMEM151AQ8N4L1 468 aa10.16□□□□□ -0.78
LINC00458-201ENST00000423442 RNF217Q8TC41 542 aa10.16□□□□□ -0.78
LINC00458-201ENST00000423442 TOPBP1Q92547 1522 aa10.16□□□□□ -0.78
LINC00458-201ENST00000423442 CDC14CA4D256 554 aa10.15□□□□□ -0.78
LINC00458-201ENST00000423442 ERVH48-1M5A8F1 160 aa10.15□□□□□ -0.78
LINC00458-201ENST00000423442 DZIP3Q86Y13 1208 aaKnown RBP10.15□□□□□ -0.78
LINC00458-201ENST00000423442 AQRO60306 1485 aaKnown RBP eCLIP10.15□□□□□ -0.78
LINC00458-201ENST00000423442 LILRA1O75019 489 aa10.14□□□□□ -0.79
LINC00458-201ENST00000423442 RASSF7Q02833 373 aa10.14□□□□□ -0.79
LINC00458-201ENST00000423442 KDF1Q8NAX2 398 aaPredicted RBP10.14□□□□□ -0.79
LINC00458-201ENST00000423442 ADAMTS8Q9UP79 889 aa10.14□□□□□ -0.79
LINC00458-201ENST00000423442 RSF1Q96T23 1441 aaPredicted RBP10.14□□□□□ -0.79
LINC00458-201ENST00000423442 SENP3-EIF4A1A0A087X0R7 540 aa10.13□□□□□ -0.79
LINC00458-201ENST00000423442 GDF11O95390 407 aa10.13□□□□□ -0.79
LINC00458-201ENST00000423442 ADH1AP07327 375 aa10.13□□□□□ -0.79
LINC00458-201ENST00000423442 ZNF385CQ66K41 422 aaPredicted RBP10.13□□□□□ -0.79
LINC00458-201ENST00000423442 WHAMMQ8TF30 809 aa10.13□□□□□ -0.79
LINC00458-201ENST00000423442 RFC5P40937 340 aa10.12□□□□□ -0.79
LINC00458-201ENST00000423442 FOXD4L5Q5VV16 416 aaPredicted RBP10.12□□□□□ -0.79
LINC00458-201ENST00000423442 SV2AQ7L0J3 742 aa10.12□□□□□ -0.79
LINC00458-201ENST00000423442 PNMA1Q8ND90 353 aa10.11□□□□□ -0.79
LINC00458-201ENST00000423442 ESPNB1AK53 854 aa10.1□□□□□ -0.79
LINC00458-201ENST00000423442 RNF225M0QZC1 329 aaPredicted RBP10.1□□□□□ -0.79
LINC00458-201ENST00000423442 PTGIRP43119 386 aa10.1□□□□□ -0.79
LINC00458-201ENST00000423442 SVOPQ8N4V2 548 aa10.1□□□□□ -0.79
LINC00458-201ENST00000423442 TRIM34Q9BYJ4 488 aa10.1□□□□□ -0.79
LINC00458-201ENST00000423442 TARBP1Q13395 1621 aaKnown RBP10.1□□□□□ -0.79
LINC00458-201ENST00000423442 ABCC8Q09428 1581 aa10.09□□□□□ -0.79
LINC00458-201ENST00000423442 CYLDQ9NQC7 956 aa10.09□□□□□ -0.79
LINC00458-201ENST00000423442 CCDC88BA6NC98 1476 aa10.09□□□□□ -0.79
LINC00458-201ENST00000423442 SLURP2P0DP57 97 aa10.08□□□□□ -0.8
LINC00458-201ENST00000423442 CUEDC1Q9NWM3 386 aaPredicted RBP10.08□□□□□ -0.8
LINC00458-201ENST00000423442 DNMBPQ6XZF7 1577 aa10.08□□□□□ -0.8
LINC00458-201ENST00000423442 LYSMD3Q7Z3D4 306 aa10.06□□□□□ -0.8
LINC00458-201ENST00000423442 ARHGEF15O94989 841 aa10.05□□□□□ -0.8
LINC00458-201ENST00000423442 RHOQP17081 205 aa10.05□□□□□ -0.8
LINC00458-201ENST00000423442 PRICKLE2Q7Z3G6 844 aa10.05□□□□□ -0.8
LINC00458-201ENST00000423442 CLASP1Q7Z460 1538 aa10.05□□□□□ -0.8
LINC00458-201ENST00000423442 GIGYF1O75420 1035 aaPredicted RBP10.04□□□□□ -0.8
LINC00458-201ENST00000423442 POLA1P09884 1462 aaPredicted RBP10.04□□□□□ -0.8
LINC00458-201ENST00000423442 RAD54L2Q9Y4B4 1467 aa10.04□□□□□ -0.8
LINC00458-201ENST00000423442 TDRD9Q8NDG6 1382 aaKnown RBP10.03□□□□□ -0.8
LINC00458-201ENST00000423442 ADAMTS2O95450 1211 aa10.03□□□□□ -0.8
LINC00458-201ENST00000423442 SEPT12Q8IYM1 358 aa10.03□□□□□ -0.8
LINC00458-201ENST00000423442 PCDHB9Q9Y5E1 797 aa10.03□□□□□ -0.8
LINC00458-201ENST00000423442 RNF144AP50876 292 aaPredicted RBP10.02□□□□□ -0.81
LINC00458-201ENST00000423442 GAS6Q14393 721 aa10.02□□□□□ -0.81
LINC00458-201ENST00000423442 LYPD4Q6UWN0 246 aa10.02□□□□□ -0.81
LINC00458-201ENST00000423442 ZBBXA8MT70 800 aa10.01□□□□□ -0.81
LINC00458-201ENST00000423442 FBXO45P0C2W1 286 aa10.01□□□□□ -0.81
LINC00458-201ENST00000423442 IRS1P35568 1242 aa10.01□□□□□ -0.81
LINC00458-201ENST00000423442 CHMP7Q8WUX9 453 aaPredicted RBP10.01□□□□□ -0.81
LINC00458-201ENST00000423442 PCMTD1Q96MG8 357 aaPredicted RBP10.01□□□□□ -0.81
LINC00458-201ENST00000423442 SNAPC4Q5SXM2 1469 aa10.01□□□□□ -0.81
LINC00458-201ENST00000423442 SYNJ1O43426 1573 aa10.01□□□□□ -0.81
LINC00458-201ENST00000423442 ATP5J2-PTCD1G3V325 749 aa10□□□□□ -0.81
LINC00458-201ENST00000423442 TMEM259Q4ZIN3 620 aa10□□□□□ -0.81
LINC00458-201ENST00000423442 GJD4Q96KN9 370 aaPredicted RBP10□□□□□ -0.81
LINC00458-201ENST00000423442 SOGA1O94964 1423 aa9.99□□□□□ -0.81
LINC00458-201ENST00000423442 MEN1O00255 615 aa9.99□□□□□ -0.81
LINC00458-201ENST00000423442 DNMT3AQ9Y6K1 912 aaPredicted RBP9.99□□□□□ -0.81
LINC00458-201ENST00000423442 A0A1W2PRU2 124 aa9.98□□□□□ -0.81
LINC00458-201ENST00000423442 MARSP56192 900 aaKnown RBP9.98□□□□□ -0.81
LINC00458-201ENST00000423442 SRSF11Q05519 484 aaKnown RBP9.98□□□□□ -0.81
LINC00458-201ENST00000423442 ZNF837Q96EG3 531 aaPredicted RBP9.98□□□□□ -0.81
LINC00458-201ENST00000423442 GOPCQ9HD26 462 aa9.98□□□□□ -0.81
LINC00458-201ENST00000423442 GAPVD1Q14C86 1478 aa9.98□□□□□ -0.81
LINC00458-201ENST00000423442 GPR25O00155 361 aa9.97□□□□□ -0.81
LINC00458-201ENST00000423442 IGHA1P01876 353 aa9.96□□□□□ -0.82
LINC00458-201ENST00000423442 CELA2BP08218 269 aaPredicted RBP9.96□□□□□ -0.82
LINC00458-201ENST00000423442 DBN1Q16643 649 aa9.96□□□□□ -0.82
LINC00458-201ENST00000423442 GPAT2Q6NUI2 795 aa9.96□□□□□ -0.82
LINC00458-201ENST00000423442 KANK3Q6NY19 840 aa9.96□□□□□ -0.82
LINC00458-201ENST00000423442 RIPOR1Q6ZS17 1223 aa9.96□□□□□ -0.82
LINC00458-201ENST00000423442 IL27Q8NEV9 243 aa9.96□□□□□ -0.82
LINC00458-201ENST00000423442 BCANQ96GW7 911 aa9.96□□□□□ -0.82
LINC00458-201ENST00000423442 SUPT5HO00267 1087 aaKnown RBP9.95□□□□□ -0.82
LINC00458-201ENST00000423442 ERVK-9P63128 1117 aa9.95□□□□□ -0.82
LINC00458-201ENST00000423442 POU4F2Q12837 409 aa9.95□□□□□ -0.82
LINC00458-201ENST00000423442 TRIM22Q8IYM9 498 aa9.95□□□□□ -0.82
LINC00458-201ENST00000423442 MAGI1Q96QZ7 1491 aaPredicted RBP9.95□□□□□ -0.82
LINC00458-201ENST00000423442 SLC24A1O60721 1099 aa9.94□□□□□ -0.82
LINC00458-201ENST00000423442 GPC1P35052 558 aa9.94□□□□□ -0.82
LINC00458-201ENST00000423442 SCTRP47872 440 aa9.94□□□□□ -0.82
LINC00458-201ENST00000423442 CC2D2BQ6DHV5 1058 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms