RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 TRAF7Q6Q0C0 670 aa9.41□□□□□ -0.9
NIFKP3-201ENST00000417799 CCDC85AQ96PX6 553 aaPredicted RBP9.41□□□□□ -0.9
NIFKP3-201ENST00000417799 MKRN1Q9UHC7 482 aaKnown RBP9.41□□□□□ -0.9
NIFKP3-201ENST00000417799 DOLKQ9UPQ8 538 aa9.41□□□□□ -0.9
NIFKP3-201ENST00000417799 EIF4G3O43432 1585 aaKnown RBP9.41□□□□□ -0.9
NIFKP3-201ENST00000417799 CARMIL1Q5VZK9 1371 aa9.4□□□□□ -0.9
NIFKP3-201ENST00000417799 PDE4CQ08493 712 aa9.4□□□□□ -0.9
NIFKP3-201ENST00000417799 VASH1Q7L8A9 365 aaPredicted RBP9.4□□□□□ -0.9
NIFKP3-201ENST00000417799 SEPT12Q8IYM1 358 aa9.4□□□□□ -0.9
NIFKP3-201ENST00000417799 KCTD15Q96SI1 283 aaPredicted RBP9.4□□□□□ -0.9
NIFKP3-201ENST00000417799 TRAIPQ9BWF2 469 aa9.4□□□□□ -0.9
NIFKP3-201ENST00000417799 CCDC125Q86Z20 511 aa9.39□□□□□ -0.91
NIFKP3-201ENST00000417799 MAP4K5Q9Y4K4 846 aa9.39□□□□□ -0.91
NIFKP3-201ENST00000417799 PRXQ9BXM0 1461 aa9.39□□□□□ -0.91
NIFKP3-201ENST00000417799 ATP5J2-PTCD1G3V325 749 aa9.38□□□□□ -0.91
NIFKP3-201ENST00000417799 ARID5BQ14865 1188 aa9.38□□□□□ -0.91
NIFKP3-201ENST00000417799 OXLD1Q5BKU9 147 aa9.38□□□□□ -0.91
NIFKP3-201ENST00000417799 PBRM1Q86U86 1689 aa9.37□□□□□ -0.91
NIFKP3-201ENST00000417799 LOC105371045A0A1W2PR82 267 aa9.37□□□□□ -0.91
NIFKP3-201ENST00000417799 RAB15P59190 212 aa9.37□□□□□ -0.91
NIFKP3-201ENST00000417799 CDK15Q96Q40 435 aa9.37□□□□□ -0.91
NIFKP3-201ENST00000417799 NOD1Q9Y239 953 aa9.37□□□□□ -0.91
NIFKP3-201ENST00000417799 USTQ9Y2C2 406 aa9.37□□□□□ -0.91
NIFKP3-201ENST00000417799 PCDHB11Q9Y5F2 797 aa9.37□□□□□ -0.91
NIFKP3-201ENST00000417799 SNAPC4Q5SXM2 1469 aa9.36□□□□□ -0.91
NIFKP3-201ENST00000417799 RASA1P20936 1047 aa9.36□□□□□ -0.91
NIFKP3-201ENST00000417799 SPRYD7Q5W111 196 aa9.36□□□□□ -0.91
NIFKP3-201ENST00000417799 LARP1Q6PKG0 1096 aaKnown RBP9.36□□□□□ -0.91
NIFKP3-201ENST00000417799 CDCA7Q9BWT1 371 aaPredicted RBP9.36□□□□□ -0.91
NIFKP3-201ENST00000417799 FHAD1B1AJZ9 1412 aa9.36□□□□□ -0.91
NIFKP3-201ENST00000417799 MAGI1Q96QZ7 1491 aaPredicted RBP9.35□□□□□ -0.91
NIFKP3-201ENST00000417799 RAPGEF2Q9Y4G8 1499 aa9.35□□□□□ -0.91
NIFKP3-201ENST00000417799 FAM196BA6NMK8 535 aa9.35□□□□□ -0.91
NIFKP3-201ENST00000417799 WNT7AO00755 349 aa9.35□□□□□ -0.91
NIFKP3-201ENST00000417799 SIAH2O43255 324 aa9.35□□□□□ -0.91
NIFKP3-201ENST00000417799 ELOAQ14241 798 aaKnown RBP9.35□□□□□ -0.91
NIFKP3-201ENST00000417799 INTS6LQ5JSJ4 861 aaKnown RBP9.35□□□□□ -0.91
NIFKP3-201ENST00000417799 TRIM50Q86XT4 487 aa9.35□□□□□ -0.91
NIFKP3-201ENST00000417799 MPNDQ8N594 471 aa9.35□□□□□ -0.91
NIFKP3-201ENST00000417799 TLL2Q9Y6L7 1015 aa9.35□□□□□ -0.91
NIFKP3-201ENST00000417799 CUL7Q14999 1698 aa9.35□□□□□ -0.91
NIFKP3-201ENST00000417799 KIF21BO75037 1637 aa9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 USP17L15C9J2P7 530 aa9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 USP17L10C9JJH3 530 aa9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 USP17L13C9JLJ4 530 aa9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 USP17L12C9JPN9 530 aa9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 USP17L11C9JVI0 530 aa9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 USP17L21D6R901 530 aa9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 USP17L18D6R9N7 530 aa9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 USP17L22D6RA61 530 aa9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 USP17L17D6RBQ6 530 aa9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 USP17L19D6RCP7 530 aa9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 USP17L20D6RJB6 530 aa9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 USP17L24Q0WX57 530 aa9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 USP4Q13107 963 aa9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 CRTC2Q53ET0 693 aaPredicted RBP9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 SIRT1Q96EB6 747 aa9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 MRGPRX2Q96LB1 330 aa9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 NOVA2Q9UNW9 492 aaKnown RBP9.34□□□□□ -0.91
NIFKP3-201ENST00000417799 ADAMTS12P58397 1594 aa9.33□□□□□ -0.92
NIFKP3-201ENST00000417799 ERVH48-1M5A8F1 160 aa9.33□□□□□ -0.92
NIFKP3-201ENST00000417799 FSHRP23945 695 aa9.33□□□□□ -0.92
NIFKP3-201ENST00000417799 GRM5P41594 1212 aa9.33□□□□□ -0.92
NIFKP3-201ENST00000417799 ATP1A2P50993 1020 aa9.33□□□□□ -0.92
NIFKP3-201ENST00000417799 PTK7Q13308 1070 aa9.33□□□□□ -0.92
NIFKP3-201ENST00000417799 OGFOD1Q8N543 542 aa9.33□□□□□ -0.92
NIFKP3-201ENST00000417799 CHMP7Q8WUX9 453 aaPredicted RBP9.33□□□□□ -0.92
NIFKP3-201ENST00000417799 SYNJ2O15056 1496 aa9.33□□□□□ -0.92
NIFKP3-201ENST00000417799 GOLGA3Q08378 1498 aa9.33□□□□□ -0.92
NIFKP3-201ENST00000417799 ZNF697Q5TEC3 545 aa9.32□□□□□ -0.92
NIFKP3-201ENST00000417799 ZNF598Q86UK7 904 aaKnown RBP9.32□□□□□ -0.92
NIFKP3-201ENST00000417799 DNAAF2Q9NVR5 837 aaKnown RBP9.32□□□□□ -0.92
NIFKP3-201ENST00000417799 ZMIZ1Q9ULJ6 1067 aa9.32□□□□□ -0.92
NIFKP3-201ENST00000417799 CARNS1A5YM72 827 aa9.31□□□□□ -0.92
NIFKP3-201ENST00000417799 ADH1CP00326 375 aa9.31□□□□□ -0.92
NIFKP3-201ENST00000417799 GTF2IP78347 998 aa9.31□□□□□ -0.92
NIFKP3-201ENST00000417799 CLDN10P78369 228 aa9.31□□□□□ -0.92
NIFKP3-201ENST00000417799 DHX9Q08211 1270 aaKnown RBP9.31□□□□□ -0.92
NIFKP3-201ENST00000417799 TRIM26Q12899 539 aaPredicted RBP9.31□□□□□ -0.92
NIFKP3-201ENST00000417799 Q6ZNB5 142 aa9.31□□□□□ -0.92
NIFKP3-201ENST00000417799 PRKD2Q9BZL6 878 aa9.31□□□□□ -0.92
NIFKP3-201ENST00000417799 TMEM88BA6NKF7 163 aa9.3□□□□□ -0.92
NIFKP3-201ENST00000417799 MYCP01106 439 aaPredicted RBP9.3□□□□□ -0.92
NIFKP3-201ENST00000417799 TMEM164Q5U3C3 297 aa9.3□□□□□ -0.92
NIFKP3-201ENST00000417799 ANKMY2Q8IV38 441 aa9.3□□□□□ -0.92
NIFKP3-201ENST00000417799 LARGE2Q8N3Y3 721 aa9.3□□□□□ -0.92
NIFKP3-201ENST00000417799 KCTD17Q8N5Z5 321 aa9.3□□□□□ -0.92
NIFKP3-201ENST00000417799 FAM200AQ8TCP9 573 aa9.3□□□□□ -0.92
NIFKP3-201ENST00000417799 STK32AQ8WU08 396 aa9.3□□□□□ -0.92
NIFKP3-201ENST00000417799 ZNF594Q96JF6 807 aaPredicted RBP9.3□□□□□ -0.92
NIFKP3-201ENST00000417799 V9GY48 417 aaPredicted RBP9.3□□□□□ -0.92
NIFKP3-201ENST00000417799 GRIN2AQ12879 1464 aa9.29□□□□□ -0.92
NIFKP3-201ENST00000417799 ZBTB7BO15156 539 aaPredicted RBP9.29□□□□□ -0.92
NIFKP3-201ENST00000417799 FOXC1Q12948 553 aa9.29□□□□□ -0.92
NIFKP3-201ENST00000417799 NR5A1Q13285 461 aa9.29□□□□□ -0.92
NIFKP3-201ENST00000417799 TRIM52Q96A61 297 aa9.29□□□□□ -0.92
NIFKP3-201ENST00000417799 ESF1Q9H501 851 aaKnown RBP9.29□□□□□ -0.92
NIFKP3-201ENST00000417799 TNIKQ9UKE5 1360 aa9.28□□□□□ -0.92
NIFKP3-201ENST00000417799 DPYDQ12882 1025 aa9.28□□□□□ -0.92
NIFKP3-201ENST00000417799 AEBP1Q8IUX7 1158 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms