RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 IQSEC3Q9UPP2 1182 aaPredicted RBP6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 ERBB3P21860 1342 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 CCDC85CA6NKD9 419 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 SMTNL1A8MU46 457 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 DYNC1I1O14576 645 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 HSPA4P34932 840 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 BASP1P80723 227 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 IMMTQ16891 758 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 CCDC40Q4G0X9 1142 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 CEP128Q6ZU80 1094 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 NUTM1Q86Y26 1132 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 ATG3Q9NT62 314 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 PABPN1LA6NDY0 278 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 KIF3BO15066 747 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 SMC2O95347 1197 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 FOSL1P15407 271 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 XBP1P17861 261 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 GOLGA2Q08379 1002 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 STK3Q13188 491 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 SF3B2Q13435 895 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 RABL2AQ9UBK7 228 aaPredicted RBP6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 ABCF2Q9UG63 623 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 MYO15BQ96JP2 1530 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 CENPJQ9HC77 1338 aaPredicted RBP6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 PPP1R15AO75807 674 aaPredicted RBP6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 CNGA1P29973 690 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 CLCN1P35523 988 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 TMF1P82094 1093 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 FAPQ12884 760 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 NBPF8Q3BBV2 869 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 RABEP2Q9H5N1 569 aa6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 BSDC1Q9NW68 430 aaPredicted RBP6.16□□□□□ -1.42
R3HDM1-204ENST00000410054 SH3BP1Q9Y3L3 701 aa6.15□□□□□ -1.42
R3HDM1-204ENST00000410054 SSFA2P28290 1259 aa6.15□□□□□ -1.42
R3HDM1-204ENST00000410054 GCKP35557 465 aa6.15□□□□□ -1.42
R3HDM1-204ENST00000410054 OGFOD1Q8N543 542 aa6.15□□□□□ -1.42
R3HDM1-204ENST00000410054 PPFIBP2Q8ND30 876 aa6.15□□□□□ -1.42
R3HDM1-204ENST00000410054 CAGE1Q8TC20 777 aa6.15□□□□□ -1.42
R3HDM1-204ENST00000410054 SPATA32Q96LK8 384 aa6.15□□□□□ -1.42
R3HDM1-204ENST00000410054 NAP1L3Q99457 506 aaPredicted RBP6.15□□□□□ -1.42
R3HDM1-204ENST00000410054 UTP6Q9NYH9 597 aaKnown RBP6.15□□□□□ -1.42
R3HDM1-204ENST00000410054 KLHL42Q9P2K6 505 aa6.15□□□□□ -1.42
R3HDM1-204ENST00000410054 CCDC189A1A4V9 331 aa6.15□□□□□ -1.43
R3HDM1-204ENST00000410054 RNF8O76064 485 aa6.15□□□□□ -1.43
R3HDM1-204ENST00000410054 MSL3P1P0C860 447 aa6.15□□□□□ -1.43
R3HDM1-204ENST00000410054 DMTNQ08495 405 aa6.15□□□□□ -1.43
R3HDM1-204ENST00000410054 MRPL28Q13084 256 aaKnown RBP6.15□□□□□ -1.43
R3HDM1-204ENST00000410054 CCDC70Q6NSX1 233 aa6.15□□□□□ -1.43
R3HDM1-204ENST00000410054 CEP135Q66GS9 1140 aa6.15□□□□□ -1.43
R3HDM1-204ENST00000410054 CCDC89Q8N998 374 aa6.15□□□□□ -1.43
R3HDM1-204ENST00000410054 C1orf131Q8NDD1 294 aaKnown RBP6.15□□□□□ -1.43
R3HDM1-204ENST00000410054 CXorf56Q9H5V9 222 aa6.15□□□□□ -1.43
R3HDM1-204ENST00000410054 IVNS1ABPQ9Y6Y0 642 aa6.15□□□□□ -1.43
R3HDM1-204ENST00000410054 HOXA2O43364 376 aa6.14□□□□□ -1.43
R3HDM1-204ENST00000410054 ERLIN1O75477 346 aa6.14□□□□□ -1.43
R3HDM1-204ENST00000410054 ERCC5P28715 1186 aaPredicted RBP6.14□□□□□ -1.43
R3HDM1-204ENST00000410054 E2F5Q15329 346 aa6.14□□□□□ -1.43
R3HDM1-204ENST00000410054 KLHL10Q6JEL2 608 aa6.14□□□□□ -1.43
R3HDM1-204ENST00000410054 TTLL12Q14166 644 aaPredicted RBP6.14□□□□□ -1.43
R3HDM1-204ENST00000410054 LRRC23Q53EV4 343 aaPredicted RBP6.14□□□□□ -1.43
R3HDM1-204ENST00000410054 DRC7Q8IY82 874 aa6.14□□□□□ -1.43
R3HDM1-204ENST00000410054 SPC24Q8NBT2 197 aa6.14□□□□□ -1.43
R3HDM1-204ENST00000410054 GSDMBQ8TAX9 411 aa6.14□□□□□ -1.43
R3HDM1-204ENST00000410054 NOL7Q9UMY1 257 aaKnown RBP6.14□□□□□ -1.43
R3HDM1-204ENST00000410054 FOSP01100 380 aaPredicted RBP6.14□□□□□ -1.43
R3HDM1-204ENST00000410054 CCDC80Q76M96 950 aa6.14□□□□□ -1.43
R3HDM1-204ENST00000410054 FAM184AQ8NB25 1140 aa6.14□□□□□ -1.43
R3HDM1-204ENST00000410054 CDK5RAP3Q96JB5 506 aa6.14□□□□□ -1.43
R3HDM1-204ENST00000410054 TMX1Q9H3N1 280 aa6.14□□□□□ -1.43
R3HDM1-204ENST00000410054 PDE6BP35913 854 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 HNRNPUQ00839 825 aaKnown RBP eCLIP6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 UBE4AQ14139 1066 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 TOMM20Q15388 145 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 PDCD2Q16342 344 aaPredicted RBP6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 C10orf67Q8IYJ2 551 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 BCL2L13Q9BXK5 485 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 V9GYY5 206 aaPredicted RBP6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 TBCAO75347 108 aaKnown RBP6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 PRPF40AO75400 957 aaKnown RBP6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 VCAM1P19320 739 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 ABL2P42684 1182 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 SCLT1Q96NL6 688 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 IRX1P78414 480 aaPredicted RBP6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 TRDNQ13061 729 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 CFAP58Q5T655 872 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 SMYD5Q6GMV2 418 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 FAM76AQ8TAV0 307 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 C17orf50Q8WW18 174 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 SPOCK2Q92563 424 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 SH3GL3Q99963 347 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 SELENOSQ9BQE4 189 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 PPCSQ9HAB8 311 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 MRGBPQ9NV56 204 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 CCDC39Q9UFE4 941 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 KRT10P13645 584 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 TPD52P55327 224 aaPredicted RBP6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 MAP3K7CLP57077 242 aa6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 SF3B3Q15393 1217 aaKnown RBP6.13□□□□□ -1.43
R3HDM1-204ENST00000410054 TSNAXIP1Q2TAA8 658 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms