RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 SEPT12Q8IYM1 358 aa16.69■□□□□ 0.26
HLA-DQB1-203ENST00000399082 PKD1L3Q7Z443 1732 aa16.69■□□□□ 0.26
HLA-DQB1-203ENST00000399082 IL2RBP14784 551 aa16.68■□□□□ 0.26
HLA-DQB1-203ENST00000399082 TNS2Q63HR2 1409 aa16.68■□□□□ 0.26
HLA-DQB1-203ENST00000399082 SULT6B1Q6IMI4 303 aa16.67■□□□□ 0.26
HLA-DQB1-203ENST00000399082 ILDR2Q71H61 639 aa16.67■□□□□ 0.26
HLA-DQB1-203ENST00000399082 HMOX1P09601 288 aa16.66■□□□□ 0.26
HLA-DQB1-203ENST00000399082 U2SURPO15042 1029 aaKnown RBP16.65■□□□□ 0.26
HLA-DQB1-203ENST00000399082 CDCA7Q9BWT1 371 aaPredicted RBP16.64■□□□□ 0.25
HLA-DQB1-203ENST00000399082 RAPGEF4Q8WZA2 1011 aa16.63■□□□□ 0.25
HLA-DQB1-203ENST00000399082 RSPH6AQ9H0K4 717 aa16.63■□□□□ 0.25
HLA-DQB1-203ENST00000399082 A0A0G2JS52 829 aa16.62■□□□□ 0.25
HLA-DQB1-203ENST00000399082 U2AF1L5P0DN76 240 aaPredicted RBP16.62■□□□□ 0.25
HLA-DQB1-203ENST00000399082 TATP17735 454 aaPredicted RBP16.62■□□□□ 0.25
HLA-DQB1-203ENST00000399082 U2AF1Q01081 240 aaKnown RBP eCLIP16.62■□□□□ 0.25
HLA-DQB1-203ENST00000399082 MYT1Q01538 1121 aa16.62■□□□□ 0.25
HLA-DQB1-203ENST00000399082 NUDCQ9Y266 331 aa16.62■□□□□ 0.25
HLA-DQB1-203ENST00000399082 PLEKHG2Q9H7P9 1386 aa16.62■□□□□ 0.25
HLA-DQB1-203ENST00000399082 DDB1Q16531 1140 aa16.61■□□□□ 0.25
HLA-DQB1-203ENST00000399082 MIER1Q8N108 512 aa16.61■□□□□ 0.25
HLA-DQB1-203ENST00000399082 MARCH10Q8NA82 808 aaPredicted RBP16.61■□□□□ 0.25
HLA-DQB1-203ENST00000399082 FAM182BQ5T319 152 aa16.6■□□□□ 0.25
HLA-DQB1-203ENST00000399082 PRKAR2BP31323 418 aa16.59■□□□□ 0.25
HLA-DQB1-203ENST00000399082 KRT27Q7Z3Y8 459 aa16.59■□□□□ 0.25
HLA-DQB1-203ENST00000399082 ZCRB1Q8TBF4 217 aaKnown RBP16.59■□□□□ 0.25
HLA-DQB1-203ENST00000399082 MRS2Q9HD23 443 aa16.59■□□□□ 0.25
HLA-DQB1-203ENST00000399082 EXOC5O00471 708 aa16.58■□□□□ 0.24
HLA-DQB1-203ENST00000399082 CYP27B1O15528 508 aa16.58■□□□□ 0.24
HLA-DQB1-203ENST00000399082 PNISRQ8TF01 805 aaKnown RBP16.58■□□□□ 0.24
HLA-DQB1-203ENST00000399082 PHACTR3Q96KR7 559 aa16.58■□□□□ 0.24
HLA-DQB1-203ENST00000399082 PLEKHF1Q96S99 279 aa16.58■□□□□ 0.24
HLA-DQB1-203ENST00000399082 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.58■□□□□ 0.24
HLA-DQB1-203ENST00000399082 EP400Q96L91 3159 aa16.57■□□□□ 0.24
HLA-DQB1-203ENST00000399082 TOGARAM1Q9Y4F4 1720 aa16.57■□□□□ 0.24
HLA-DQB1-203ENST00000399082 FCHSD2O94868 740 aa16.57■□□□□ 0.24
HLA-DQB1-203ENST00000399082 ADAMTS8Q9UP79 889 aa16.57■□□□□ 0.24
HLA-DQB1-203ENST00000399082 SBF2Q86WG5 1849 aa16.56■□□□□ 0.24
HLA-DQB1-203ENST00000399082 BCL9O00512 1426 aa16.55■□□□□ 0.24
HLA-DQB1-203ENST00000399082 PCDH11XQ9BZA7 1347 aa16.55■□□□□ 0.24
HLA-DQB1-203ENST00000399082 PCDH11YQ9BZA8 1340 aa16.55■□□□□ 0.24
HLA-DQB1-203ENST00000399082 CCER2I3L3R5 266 aa16.55■□□□□ 0.24
HLA-DQB1-203ENST00000399082 PDE3BQ13370 1112 aa16.55■□□□□ 0.24
HLA-DQB1-203ENST00000399082 MTHFSDQ2M296 383 aaKnown RBP16.55■□□□□ 0.24
HLA-DQB1-203ENST00000399082 DDX54Q8TDD1 881 aaKnown RBP16.55■□□□□ 0.24
HLA-DQB1-203ENST00000399082 DOT1LQ8TEK3 1739 aa16.55■□□□□ 0.24
HLA-DQB1-203ENST00000399082 ADAMTS7Q9UKP4 1686 aa16.54■□□□□ 0.24
HLA-DQB1-203ENST00000399082 PHKG2P15735 406 aa16.54■□□□□ 0.24
HLA-DQB1-203ENST00000399082 WDR43Q15061 677 aaKnown RBP eCLIP16.54■□□□□ 0.24
HLA-DQB1-203ENST00000399082 PLEKHO1Q53GL0 409 aaPredicted RBP16.54■□□□□ 0.24
HLA-DQB1-203ENST00000399082 SPG7Q9UQ90 795 aa16.54■□□□□ 0.24
HLA-DQB1-203ENST00000399082 AMOTQ4VCS5 1084 aa16.53■□□□□ 0.24
HLA-DQB1-203ENST00000399082 ZNF530Q6P9A1 599 aaPredicted RBP16.53■□□□□ 0.24
HLA-DQB1-203ENST00000399082 KDM6AO15550 1401 aaPredicted RBP16.53■□□□□ 0.24
HLA-DQB1-203ENST00000399082 NKX1-1Q15270 411 aaPredicted RBP16.52■□□□□ 0.24
HLA-DQB1-203ENST00000399082 CCDC146Q8IYE0 955 aa16.52■□□□□ 0.24
HLA-DQB1-203ENST00000399082 TNS1Q9HBL0 1735 aaKnown RBP16.52■□□□□ 0.24
HLA-DQB1-203ENST00000399082 DLG5Q8TDM6 1919 aa16.52■□□□□ 0.23
HLA-DQB1-203ENST00000399082 NHSQ6T4R5 1651 aa16.52■□□□□ 0.23
HLA-DQB1-203ENST00000399082 VIRMAQ69YN4 1812 aaKnown RBP16.52■□□□□ 0.23
HLA-DQB1-203ENST00000399082 PTF1AQ7RTS3 328 aa16.51■□□□□ 0.23
HLA-DQB1-203ENST00000399082 IFNL2Q8IZJ0 200 aa16.5■□□□□ 0.23
HLA-DQB1-203ENST00000399082 SCN11AQ9UI33 1791 aa16.5■□□□□ 0.23
HLA-DQB1-203ENST00000399082 FAM196AQ6ZSG2 479 aa16.49■□□□□ 0.23
HLA-DQB1-203ENST00000399082 ITGB4P16144 1822 aa16.49■□□□□ 0.23
HLA-DQB1-203ENST00000399082 AKAP4Q5JQC9 854 aa16.48■□□□□ 0.23
HLA-DQB1-203ENST00000399082 GAS2L2Q8NHY3 880 aa16.48■□□□□ 0.23
HLA-DQB1-203ENST00000399082 RUNDC1Q96C34 613 aa16.48■□□□□ 0.23
HLA-DQB1-203ENST00000399082 MAP3K5Q99683 1374 aa16.48■□□□□ 0.23
HLA-DQB1-203ENST00000399082 MRC1P22897 1456 aa16.48■□□□□ 0.23
HLA-DQB1-203ENST00000399082 KCNQ2O43526 872 aa16.47■□□□□ 0.23
HLA-DQB1-203ENST00000399082 ACSBG1Q96GR2 724 aa16.47■□□□□ 0.23
HLA-DQB1-203ENST00000399082 NFE2L2Q16236 605 aa16.46■□□□□ 0.23
HLA-DQB1-203ENST00000399082 C1orf141Q5JVX7 400 aa16.46■□□□□ 0.23
HLA-DQB1-203ENST00000399082 FAM9BQ8IZU0 186 aa16.46■□□□□ 0.23
HLA-DQB1-203ENST00000399082 BTAF1O14981 1849 aa16.46■□□□□ 0.23
HLA-DQB1-203ENST00000399082 NCBP3Q53F19 620 aaKnown RBP16.45■□□□□ 0.22
HLA-DQB1-203ENST00000399082 MPRIPQ6WCQ1 1025 aa16.45■□□□□ 0.22
HLA-DQB1-203ENST00000399082 DCAF5Q96JK2 942 aa16.45■□□□□ 0.22
HLA-DQB1-203ENST00000399082 PNNQ9H307 717 aaKnown RBP16.45■□□□□ 0.22
HLA-DQB1-203ENST00000399082 LGR6Q9HBX8 967 aa16.45■□□□□ 0.22
HLA-DQB1-203ENST00000399082 SIPA1L3O60292 1781 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB1-203ENST00000399082 MAPK8IP3Q9UPT6 1336 aa16.45■□□□□ 0.22
HLA-DQB1-203ENST00000399082 CEMIPQ8WUJ3 1361 aa16.44■□□□□ 0.22
HLA-DQB1-203ENST00000399082 TRIM37O94972 964 aa16.44■□□□□ 0.22
HLA-DQB1-203ENST00000399082 TMPOP42166 694 aaKnown RBP16.44■□□□□ 0.22
HLA-DQB1-203ENST00000399082 IL17REQ8NFR9 667 aa16.44■□□□□ 0.22
HLA-DQB1-203ENST00000399082 RRP7AQ9Y3A4 280 aaKnown RBP16.44■□□□□ 0.22
HLA-DQB1-203ENST00000399082 GNAT3A8MTJ3 354 aa16.43■□□□□ 0.22
HLA-DQB1-203ENST00000399082 APAF1O14727 1248 aa16.43■□□□□ 0.22
HLA-DQB1-203ENST00000399082 RNMTO43148 476 aaKnown RBP16.43■□□□□ 0.22
HLA-DQB1-203ENST00000399082 PRIM1P49642 420 aaKnown RBP16.43■□□□□ 0.22
HLA-DQB1-203ENST00000399082 UPF1Q92900 1129 aaKnown RBP eCLIP16.43■□□□□ 0.22
HLA-DQB1-203ENST00000399082 KAT6BQ8WYB5 2073 aa16.42■□□□□ 0.22
HLA-DQB1-203ENST00000399082 SENP3-EIF4A1A0A087X0R7 540 aa16.42■□□□□ 0.22
HLA-DQB1-203ENST00000399082 HSP90AB1P08238 724 aaKnown RBP16.42■□□□□ 0.22
HLA-DQB1-203ENST00000399082 DCTN1Q14203 1278 aa16.42■□□□□ 0.22
HLA-DQB1-203ENST00000399082 PAPPAQ13219 1627 aa16.41■□□□□ 0.22
HLA-DQB1-203ENST00000399082 MCM10Q7L590 875 aa16.41■□□□□ 0.22
HLA-DQB1-203ENST00000399082 BCL11BQ9C0K0 894 aaPredicted RBP16.41■□□□□ 0.22
HLA-DQB1-203ENST00000399082 TRIM35Q9UPQ4 493 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms