RNA–Protein interactions for RNA: ENST00000358813.4

CCL20-201, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCL20, Length 800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-201ENST00000358813 CFAP70Q5T0N1 1121 aa8.84□□□□□ -0.99
CCL20-201ENST00000358813 PPP1R12CQ9BZL4 782 aa8.84□□□□□ -0.99
CCL20-201ENST00000358813 SRPK2P78362 688 aaKnown RBP8.83□□□□□ -1
CCL20-201ENST00000358813 ADAMTS19Q8TE59 1207 aa8.83□□□□□ -1
CCL20-201ENST00000358813 CDV3Q9UKY7 258 aaKnown RBP8.83□□□□□ -1
CCL20-201ENST00000358813 MAP4K5Q9Y4K4 846 aa8.83□□□□□ -1
CCL20-201ENST00000358813 PCDHB9Q9Y5E1 797 aa8.83□□□□□ -1
CCL20-201ENST00000358813 SYNJ1O43426 1573 aa8.82□□□□□ -1
CCL20-201ENST00000358813 NNTQ13423 1086 aa8.82□□□□□ -1
CCL20-201ENST00000358813 HPS1Q92902 700 aa8.82□□□□□ -1
CCL20-201ENST00000358813 FSHRP23945 695 aa8.81□□□□□ -1
CCL20-201ENST00000358813 GRM5P41594 1212 aa8.81□□□□□ -1
CCL20-201ENST00000358813 NR5A1Q13285 461 aa8.81□□□□□ -1
CCL20-201ENST00000358813 CCDC27Q2M243 656 aa8.81□□□□□ -1
CCL20-201ENST00000358813 KCTD15Q96SI1 283 aaPredicted RBP8.81□□□□□ -1
CCL20-201ENST00000358813 AMOTL2Q9Y2J4 779 aa8.81□□□□□ -1
CCL20-201ENST00000358813 SOX11P35716 441 aa8.8□□□□□ -1
CCL20-201ENST00000358813 VAC14Q08AM6 782 aa8.8□□□□□ -1
CCL20-201ENST00000358813 NBPF20Q3BBV1 942 aa8.8□□□□□ -1
CCL20-201ENST00000358813 ZNF592Q92610 1267 aa8.8□□□□□ -1
CCL20-201ENST00000358813 ZNF428Q96B54 188 aa8.8□□□□□ -1
CCL20-201ENST00000358813 VRTNQ9H8Y1 702 aa8.8□□□□□ -1
CCL20-201ENST00000358813 CCDC88BA6NC98 1476 aa8.8□□□□□ -1
CCL20-201ENST00000358813 SNAPC4Q5SXM2 1469 aa8.79□□□□□ -1
CCL20-201ENST00000358813 PALM3A6NDB9 673 aaPredicted RBP8.79□□□□□ -1
CCL20-201ENST00000358813 AVPP01185 164 aa8.79□□□□□ -1
CCL20-201ENST00000358813 LMOD1P29536 600 aaPredicted RBP8.79□□□□□ -1
CCL20-201ENST00000358813 MCCD1P59942 119 aaPredicted RBP8.79□□□□□ -1
CCL20-201ENST00000358813 EIF4G2P78344 907 aaKnown RBP eCLIP8.79□□□□□ -1
CCL20-201ENST00000358813 MYT1Q01538 1121 aa8.79□□□□□ -1
CCL20-201ENST00000358813 ALG2Q9H553 416 aa8.79□□□□□ -1
CCL20-201ENST00000358813 SOGA1O94964 1423 aa8.79□□□□□ -1
CCL20-201ENST00000358813 TDRD9Q8NDG6 1382 aaKnown RBP8.78□□□□□ -1
CCL20-201ENST00000358813 TRAF7Q6Q0C0 670 aa8.78□□□□□ -1
CCL20-201ENST00000358813 IVNS1ABPQ9Y6Y0 642 aa8.78□□□□□ -1
CCL20-201ENST00000358813 POLA1P09884 1462 aaPredicted RBP8.77□□□□□ -1
CCL20-201ENST00000358813 AXIN1O15169 862 aa8.77□□□□□ -1.01
CCL20-201ENST00000358813 ATG7O95352 703 aa8.77□□□□□ -1.01
CCL20-201ENST00000358813 NR3C2P08235 984 aa8.77□□□□□ -1.01
CCL20-201ENST00000358813 RAB15P59190 212 aa8.77□□□□□ -1.01
CCL20-201ENST00000358813 CTC1Q2NKJ3 1217 aa8.77□□□□□ -1.01
CCL20-201ENST00000358813 SND1Q7KZF4 910 aaKnown RBP eCLIP8.77□□□□□ -1.012e-7■■■□□ 15.8
CCL20-201ENST00000358813 ST8SIA5O15466 376 aa8.76□□□□□ -1.01
CCL20-201ENST00000358813 B4GALNT3Q6L9W6 998 aa8.76□□□□□ -1.01
CCL20-201ENST00000358813 CCDC116Q8IYX3 515 aa8.76□□□□□ -1.01
CCL20-201ENST00000358813 TFIP11Q9UBB9 837 aaKnown RBP8.76□□□□□ -1.01
CCL20-201ENST00000358813 MAGI1Q96QZ7 1491 aaPredicted RBP8.76□□□□□ -1.01
CCL20-201ENST00000358813 WDR4P57081 412 aaKnown RBP8.75□□□□□ -1.01
CCL20-201ENST00000358813 DHX9Q08211 1270 aaKnown RBP8.75□□□□□ -1.01
CCL20-201ENST00000358813 INTS6LQ5JSJ4 861 aaKnown RBP8.75□□□□□ -1.01
CCL20-201ENST00000358813 AAASQ9NRG9 546 aa8.75□□□□□ -1.01
CCL20-201ENST00000358813 TARBP1Q13395 1621 aaKnown RBP8.75□□□□□ -1.01
CCL20-201ENST00000358813 WDR97A6NE52 1622 aa8.74□□□□□ -1.01
CCL20-201ENST00000358813 CAPN5O15484 640 aaPredicted RBP8.74□□□□□ -1.01
CCL20-201ENST00000358813 GIGYF1O75420 1035 aaPredicted RBP8.74□□□□□ -1.01
CCL20-201ENST00000358813 ZIC2O95409 532 aaPredicted RBP8.74□□□□□ -1.01
CCL20-201ENST00000358813 SMCPP49901 116 aaPredicted RBP8.74□□□□□ -1.01
CCL20-201ENST00000358813 CRIPAKQ8N1N5 446 aa8.74□□□□□ -1.01
CCL20-201ENST00000358813 GRIN2BQ13224 1484 aa8.74□□□□□ -1.01
CCL20-201ENST00000358813 GAPVD1Q14C86 1478 aa8.74□□□□□ -1.01
CCL20-201ENST00000358813 RAD54L2Q9Y4B4 1467 aa8.74□□□□□ -1.01
CCL20-201ENST00000358813 ESPNB1AK53 854 aa8.73□□□□□ -1.01
CCL20-201ENST00000358813 LCE2BO14633 110 aa8.73□□□□□ -1.01
CCL20-201ENST00000358813 TIMP2P16035 220 aa8.73□□□□□ -1.01
CCL20-201ENST00000358813 SEMA3FQ13275 785 aa8.73□□□□□ -1.01
CCL20-201ENST00000358813 PPP1R26Q5T8A7 1209 aaPredicted RBP8.73□□□□□ -1.01
CCL20-201ENST00000358813 SEPT12Q8IYM1 358 aa8.73□□□□□ -1.01
CCL20-201ENST00000358813 EMILIN1Q9Y6C2 1016 aa8.73□□□□□ -1.01
CCL20-201ENST00000358813 SYNJ2O15056 1496 aa8.72□□□□□ -1.01
CCL20-201ENST00000358813 CARNS1A5YM72 827 aa8.72□□□□□ -1.01
CCL20-201ENST00000358813 TMEM88BA6NKF7 163 aa8.72□□□□□ -1.01
CCL20-201ENST00000358813 RNF20Q5VTR2 975 aa8.72□□□□□ -1.01
CCL20-201ENST00000358813 ITPKCQ96DU7 683 aa8.72□□□□□ -1.01
CCL20-201ENST00000358813 KLF16Q9BXK1 252 aaPredicted RBP8.72□□□□□ -1.01
CCL20-201ENST00000358813 PGPEP1Q9NXJ5 209 aa8.72□□□□□ -1.01
CCL20-201ENST00000358813 CEP126Q9P2H0 1117 aa8.72□□□□□ -1.01
CCL20-201ENST00000358813 FGD5Q6ZNL6 1462 aa8.71□□□□□ -1.01
CCL20-201ENST00000358813 CLASP1Q7Z460 1538 aa8.71□□□□□ -1.01
CCL20-201ENST00000358813 UCN2Q96RP3 112 aa8.71□□□□□ -1.02
CCL20-201ENST00000358813 ZFAND3Q9H8U3 227 aa8.71□□□□□ -1.02
CCL20-201ENST00000358813 GNEQ9Y223 722 aaKnown RBP8.71□□□□□ -1.02
CCL20-201ENST00000358813 ERVH48-1M5A8F1 160 aa8.7□□□□□ -1.02
CCL20-201ENST00000358813 CDCA8Q53HL2 280 aa8.7□□□□□ -1.02
CCL20-201ENST00000358813 TMPRSS4Q9NRS4 437 aa8.7□□□□□ -1.02
CCL20-201ENST00000358813 MAFBQ9Y5Q3 323 aaPredicted RBP8.7□□□□□ -1.02
CCL20-201ENST00000358813 IGSF3O75054 1194 aa8.69□□□□□ -1.02
CCL20-201ENST00000358813 SLFNL1Q499Z3 407 aa8.69□□□□□ -1.02
CCL20-201ENST00000358813 CCDC125Q86Z20 511 aa8.69□□□□□ -1.02
CCL20-201ENST00000358813 TRIM52Q96A61 297 aa8.69□□□□□ -1.02
CCL20-201ENST00000358813 DACH1Q9UI36 760 aa8.69□□□□□ -1.02
CCL20-201ENST00000358813 LOC105371045A0A1W2PR82 267 aa8.68□□□□□ -1.02
CCL20-201ENST00000358813 ATP9BO43861 1147 aa8.67□□□□□ -1.02
CCL20-201ENST00000358813 ZNF784Q8NCA9 323 aaPredicted RBP8.67□□□□□ -1.02
CCL20-201ENST00000358813 ATP13A2Q9NQ11 1180 aa8.67□□□□□ -1.02
CCL20-201ENST00000358813 PCDHB11Q9Y5F2 797 aa8.67□□□□□ -1.02
CCL20-201ENST00000358813 BMP1P13497 986 aa8.66□□□□□ -1.02
CCL20-201ENST00000358813 TBC1D9Q6ZT07 1266 aa8.66□□□□□ -1.02
CCL20-201ENST00000358813 RNF135Q8IUD6 432 aa8.66□□□□□ -1.02
CCL20-201ENST00000358813 CCER1Q8TC90 406 aaPredicted RBP8.66□□□□□ -1.02
CCL20-201ENST00000358813 CBLBQ13191 982 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms