RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 IBSPP21815 317 aaPredicted RBP6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 GSDMDP57764 484 aa6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 SPATA32Q96LK8 384 aa6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 SYNJ1O43426 1573 aa6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 SCAPERQ9BY12 1400 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 RNF187Q5TA31 235 aaPredicted RBP6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 UVSSAQ2YD98 709 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 POLA1P09884 1462 aaPredicted RBP6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 MAGEC2Q9UBF1 373 aaPredicted RBP6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 CASQ1P31415 396 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 SARNPP82979 210 aaKnown RBP6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 FAM177A1Q8N128 213 aaPredicted RBP6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 ANKRD18AQ8IVF6 992 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 SMTNL1A8MU46 457 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 EPS15P42566 896 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 ZKSCAN5Q9Y2L8 839 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 GPRASP1Q5JY77 1395 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 KIF5CO60282 957 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 CNTROBQ8N137 903 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 ZNF397Q8NF99 534 aaPredicted RBP6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 ZFP91Q96JP5 570 aaPredicted RBP6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 BRMS1Q9HCU9 246 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 BIVM-ERCC5R4GMW8 1640 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 GOLGA6L9A6NEM1 432 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 ANKRD1Q15327 319 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 CEP135Q66GS9 1140 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 ZNF428Q96B54 188 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 TBC1D2Q9BYX2 928 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 SPATA24Q86W54 205 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 TSPYL4Q9UJ04 414 aa6.29□□□□□ -1.4
SDR42E1-201ENST00000328945 FGD6Q6ZV73 1430 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 RRBP1Q9P2E9 1410 aaKnown RBP6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 GAPVD1Q14C86 1478 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 CNTRLQ7Z7A1 2325 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 ADCY5O95622 1261 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 V9GYY5 206 aaPredicted RBP6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 TUBB4AP04350 444 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 ME1P48163 572 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 TRDNQ13061 729 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 LRRFIP2Q9Y608 721 aaKnown RBP6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 TSPOAP1O95153 1857 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 GBP6Q6ZN66 633 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 PPP6R1Q9UPN7 881 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 RP1L1Q8IWN7 2480 aaPredicted RBP6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 HIP1O00291 1037 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 USP25Q9UHP3 1055 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 KDM4AO75164 1064 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 SETSIPP0DME0 302 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 HSPA4P34932 840 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 DHX29Q7Z478 1369 aaKnown RBP6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 MAP1BP46821 2468 aaKnown RBP6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 EPB41L2O43491 1005 aaKnown RBP6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 RBM5P52756 815 aaKnown RBP eCLIP6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 NLRP6P59044 892 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 GNAI1P63096 354 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 MYCBPQ99417 103 aaPredicted RBP6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 RSPH14Q9UHP6 348 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 CYP46A1Q9Y6A2 500 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 LAMC3Q9Y6N6 1575 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 HMOX1P09601 288 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 TAX1BP1Q86VP1 789 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 TXNDC2Q86VQ3 553 aa6.28□□□□□ -1.4
SDR42E1-201ENST00000328945 NOLC1Q14978 699 aaKnown RBP eCLIP6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 WDR66Q8TBY9 1149 aa6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 CFAP45Q9UL16 551 aa6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 ZSCAN23Q3MJ62 389 aa6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 SMC1AQ14683 1233 aaKnown RBP6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 GIGYF2Q6Y7W6 1299 aaKnown RBP6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 ZSCAN31Q96LW9 406 aaPredicted RBP6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 MSL1Q68DK7 614 aa6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 SNW1Q13573 536 aaKnown RBP6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 RSRC1Q96IZ7 334 aaKnown RBP6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 MYOM3Q5VTT5 1437 aa6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 TXLNAP40222 546 aa6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 SPECC1LQ69YQ0 1117 aa6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 CDCA7LQ96GN5 454 aa6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 PAIP2Q9BPZ3 127 aaKnown RBP6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 SRRTQ9BXP5 876 aaKnown RBP6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 SCAND2PQ9GZW5 306 aaPredicted RBP6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 ARFGAP3Q9NP61 516 aa6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 CABP2Q9NPB3 220 aa6.27□□□□□ -1.41
SDR42E1-201ENST00000328945 A0A1B0GUA9 196 aa6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 CCDC175P0C221 793 aa6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 RALYLQ86SE5 291 aaKnown RBP6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 PANK2Q9BZ23 570 aa6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 TOM1L2Q6ZVM7 507 aa6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 CCDC150Q8NCX0 1101 aa6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 MICAL3Q7RTP6 2002 aa6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 SEPT7Q16181 437 aaKnown RBP6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 STIM1Q13586 685 aa6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 MVPQ14764 893 aaKnown RBP6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 PNISRQ8TF01 805 aaKnown RBP6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 NEUROD6Q96NK8 337 aa6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 VGLL3A8MV65 326 aa6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 WASHC4Q2M389 1173 aa6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 CCDC83Q8IWF9 413 aa6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 DHX37Q8IY37 1157 aaKnown RBP6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 ADAMTS8Q9UP79 889 aa6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 TMCO5BA8MYB1 307 aa6.26□□□□□ -1.41
SDR42E1-201ENST00000328945 MYCNP04198 464 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms