RNA–Protein interactions for RNA: ENST00000217957.9

VSIG1-201, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG1, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-201ENST00000217957 USP17L24Q0WX57 530 aa11.31□□□□□ -0.6
VSIG1-201ENST00000217957 PTPRTO14522 1441 aa11.3□□□□□ -0.6
VSIG1-201ENST00000217957 L3MBTL3Q96JM7 780 aaPredicted RBP11.3□□□□□ -0.6
VSIG1-201ENST00000217957 CCDC85CA6NKD9 419 aa11.3□□□□□ -0.6
VSIG1-201ENST00000217957 MCCD1P59942 119 aaPredicted RBP11.3□□□□□ -0.6
VSIG1-201ENST00000217957 WDR75Q8IWA0 830 aaKnown RBP11.3□□□□□ -0.6
VSIG1-201ENST00000217957 TMC2Q8TDI7 906 aa11.3□□□□□ -0.6
VSIG1-201ENST00000217957 WRNQ14191 1432 aaPredicted RBP eCLIP11.29□□□□□ -0.6
VSIG1-201ENST00000217957 BCORL1Q5H9F3 1711 aa11.29□□□□□ -0.6
VSIG1-201ENST00000217957 FOXK1P85037 733 aa11.29□□□□□ -0.6
VSIG1-201ENST00000217957 PRIMPOLQ96LW4 560 aa11.29□□□□□ -0.6
VSIG1-201ENST00000217957 KANSL2Q9H9L4 492 aa11.29□□□□□ -0.6
VSIG1-201ENST00000217957 KCNG1Q9UIX4 513 aa11.29□□□□□ -0.6
VSIG1-201ENST00000217957 ADAMTS12P58397 1594 aa11.29□□□□□ -0.6
VSIG1-201ENST00000217957 CCDC181Q5TID7 509 aa11.28□□□□□ -0.6
VSIG1-201ENST00000217957 TTF2Q9UNY4 1162 aaKnown RBP11.28□□□□□ -0.6
VSIG1-201ENST00000217957 PLB1Q6P1J6 1458 aa11.28□□□□□ -0.6
VSIG1-201ENST00000217957 MAGI3Q5TCQ9 1506 aa11.28□□□□□ -0.6
VSIG1-201ENST00000217957 CCER2I3L3R5 266 aa11.28□□□□□ -0.6
VSIG1-201ENST00000217957 DDX56Q9NY93 547 aaKnown RBP11.28□□□□□ -0.6
VSIG1-201ENST00000217957 PREX1Q8TCU6 1659 aa11.28□□□□□ -0.6
VSIG1-201ENST00000217957 IFFO2Q5TF58 517 aa11.28□□□□□ -0.6
VSIG1-201ENST00000217957 ZNF746Q6NUN9 644 aaPredicted RBP11.28□□□□□ -0.6
VSIG1-201ENST00000217957 OSBPL2Q9H1P3 480 aa11.28□□□□□ -0.6
VSIG1-201ENST00000217957 ODR4Q5SWX8 454 aa11.27□□□□□ -0.61
VSIG1-201ENST00000217957 FAM174AQ8TBP5 190 aa11.27□□□□□ -0.61
VSIG1-201ENST00000217957 C2orf72A6NCS6 295 aa11.27□□□□□ -0.61
VSIG1-201ENST00000217957 USP5P45974 858 aa11.27□□□□□ -0.61
VSIG1-201ENST00000217957 RASA1P20936 1047 aa11.26□□□□□ -0.61
VSIG1-201ENST00000217957 PXYLP1Q8TE99 480 aa11.26□□□□□ -0.61
VSIG1-201ENST00000217957 ASB16Q96NS5 453 aa11.26□□□□□ -0.61
VSIG1-201ENST00000217957 MAP9Q49MG5 647 aa11.26□□□□□ -0.61
VSIG1-201ENST00000217957 GNL3LQ9NVN8 582 aaKnown RBP11.26□□□□□ -0.61
VSIG1-201ENST00000217957 ECM1Q16610 540 aa11.25□□□□□ -0.61
VSIG1-201ENST00000217957 USP17L5A8MUK1 530 aa11.25□□□□□ -0.61
VSIG1-201ENST00000217957 AMPD3Q01432 767 aa11.25□□□□□ -0.61
VSIG1-201ENST00000217957 PDE3BQ13370 1112 aa11.25□□□□□ -0.61
VSIG1-201ENST00000217957 SPDYE1Q8NFV5 336 aaPredicted RBP11.25□□□□□ -0.61
VSIG1-201ENST00000217957 MKRN1Q9UHC7 482 aaKnown RBP11.25□□□□□ -0.61
VSIG1-201ENST00000217957 WWC3Q9ULE0 1092 aa11.25□□□□□ -0.61
VSIG1-201ENST00000217957 ARAP3Q8WWN8 1544 aa11.25□□□□□ -0.61
VSIG1-201ENST00000217957 ARHGAP4P98171 946 aa11.25□□□□□ -0.61
VSIG1-201ENST00000217957 NCOA4Q13772 614 aa11.25□□□□□ -0.61
VSIG1-201ENST00000217957 RNF187Q5TA31 235 aaPredicted RBP11.25□□□□□ -0.61
VSIG1-201ENST00000217957 THRAP3Q9Y2W1 955 aaKnown RBP11.25□□□□□ -0.61
VSIG1-201ENST00000217957 IER2Q9BTL4 223 aa11.24□□□□□ -0.61
VSIG1-201ENST00000217957 SPTLC1O15269 473 aa11.24□□□□□ -0.61
VSIG1-201ENST00000217957 SKIP12755 728 aa11.24□□□□□ -0.61
VSIG1-201ENST00000217957 PADI6Q6TGC4 694 aa11.24□□□□□ -0.61
VSIG1-201ENST00000217957 PTK7Q13308 1070 aa11.23□□□□□ -0.61
VSIG1-201ENST00000217957 MAGEC2Q9UBF1 373 aaPredicted RBP11.23□□□□□ -0.61
VSIG1-201ENST00000217957 MAPK8P45983 427 aa11.23□□□□□ -0.61
VSIG1-201ENST00000217957 ADCY10Q96PN6 1610 aa11.23□□□□□ -0.61
VSIG1-201ENST00000217957 NR6A1Q15406 480 aa11.22□□□□□ -0.61
VSIG1-201ENST00000217957 CCDC184Q52MB2 194 aa11.22□□□□□ -0.61
VSIG1-201ENST00000217957 C4orf46Q504U0 113 aa11.22□□□□□ -0.61
VSIG1-201ENST00000217957 KRBA2Q6ZNG9 492 aa11.22□□□□□ -0.61
VSIG1-201ENST00000217957 MAF1Q9H063 256 aa11.22□□□□□ -0.61
VSIG1-201ENST00000217957 ILDR2Q71H61 639 aa11.22□□□□□ -0.61
VSIG1-201ENST00000217957 MTA3Q9BTC8 594 aa11.22□□□□□ -0.61
VSIG1-201ENST00000217957 RNF39Q9H2S5 420 aa11.22□□□□□ -0.61
VSIG1-201ENST00000217957 CHST12Q9NRB3 414 aa11.22□□□□□ -0.61
VSIG1-201ENST00000217957 DISP3Q9P2K9 1392 aa11.21□□□□□ -0.61
VSIG1-201ENST00000217957 ERICH3Q5RHP9 1530 aa11.21□□□□□ -0.61
VSIG1-201ENST00000217957 DPYDQ12882 1025 aa11.21□□□□□ -0.61
VSIG1-201ENST00000217957 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
VSIG1-201ENST00000217957 GOLGA2Q08379 1002 aa11.21□□□□□ -0.62
VSIG1-201ENST00000217957 ELOAQ14241 798 aaKnown RBP11.21□□□□□ -0.62
VSIG1-201ENST00000217957 SYMPKQ92797 1274 aaKnown RBP11.21□□□□□ -0.62
VSIG1-201ENST00000217957 PARP2Q9UGN5 583 aa11.21□□□□□ -0.62
VSIG1-201ENST00000217957 TTC37Q6PGP7 1564 aa11.21□□□□□ -0.62
VSIG1-201ENST00000217957 RACK1P63244 317 aaKnown RBP11.2□□□□□ -0.62
VSIG1-201ENST00000217957 CLEC4GQ6UXB4 293 aa11.2□□□□□ -0.62
VSIG1-201ENST00000217957 DUSP9Q99956 384 aaKnown RBP11.2□□□□□ -0.62
VSIG1-201ENST00000217957 INPP5FQ9Y2H2 1132 aa11.2□□□□□ -0.62
VSIG1-201ENST00000217957 LTBP4Q8N2S1 1624 aa11.2□□□□□ -0.62
VSIG1-201ENST00000217957 MAMSTRQ6ZN01 415 aa11.2□□□□□ -0.62
VSIG1-201ENST00000217957 MCF2L2Q86YR7 1114 aa11.2□□□□□ -0.62
VSIG1-201ENST00000217957 UBA5Q9GZZ9 404 aa11.2□□□□□ -0.62
VSIG1-201ENST00000217957 DCTN4Q9UJW0 460 aa11.2□□□□□ -0.62
VSIG1-201ENST00000217957 DNMT3AQ9Y6K1 912 aaPredicted RBP11.2□□□□□ -0.62
VSIG1-201ENST00000217957 DDX11L8A8MPP1 907 aa11.19□□□□□ -0.62
VSIG1-201ENST00000217957 TNFRSF10BO14763 440 aa11.19□□□□□ -0.62
VSIG1-201ENST00000217957 FAM200AQ8TCP9 573 aa11.19□□□□□ -0.62
VSIG1-201ENST00000217957 CLP1Q92989 425 aaKnown RBP11.19□□□□□ -0.62
VSIG1-201ENST00000217957 FAM126AQ9BYI3 521 aaPredicted RBP11.19□□□□□ -0.62
VSIG1-201ENST00000217957 BDNFP23560 247 aa11.19□□□□□ -0.62
VSIG1-201ENST00000217957 GTF3C2Q8WUA4 911 aaPredicted RBP11.19□□□□□ -0.62
VSIG1-201ENST00000217957 MRS2Q9HD23 443 aa11.19□□□□□ -0.62
VSIG1-201ENST00000217957 CYB5RLQ6IPT4 315 aa11.18□□□□□ -0.62
VSIG1-201ENST00000217957 SYCP2LQ5T4T6 812 aa11.18□□□□□ -0.62
VSIG1-201ENST00000217957 NUTM1Q86Y26 1132 aa11.18□□□□□ -0.62
VSIG1-201ENST00000217957 KIF12Q96FN5 646 aa11.18□□□□□ -0.62
VSIG1-201ENST00000217957 PURBQ96QR8 312 aaKnown RBP11.18□□□□□ -0.62
VSIG1-201ENST00000217957 VTI1BQ9UEU0 232 aa11.18□□□□□ -0.62
VSIG1-201ENST00000217957 TMC7Q7Z402 723 aa11.17□□□□□ -0.62
VSIG1-201ENST00000217957 RNF34Q969K3 372 aa11.17□□□□□ -0.62
VSIG1-201ENST00000217957 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.17□□□□□ -0.62
VSIG1-201ENST00000217957 EVI5O60447 810 aa11.17□□□□□ -0.62
VSIG1-201ENST00000217957 ICMTO60725 284 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms